XLOC_013937


Basic Information

Item Value
gene id XLOC_013937
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 13115265 ~ 13115526 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029698
aatgggcccaaagtctgccaagaaaatatctcccacaccattacacaactaccaccagcctgaaccattcaaggcagcatggatccatgcttttatgttgttgactctaaattctgaccctaccatctgaatgtcgcagcagaaatcgaaactcatcagaccaggcaacgttttcccaatcttatattgtccaattttggtgagcctgtgtgaattgtagcctcagtttcctgttcttagctgacaggaatgccaccctgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029698 True 262 lncRNA 0.45 1 13115265 13115526

Neighbor

gene id symbol gene type direction distance location
XLOC_013935 AL844521.1 coding upstream 170299 12944850 ~ 12944966 (+)
XLOC_013934 cthrc1a coding upstream 188176 12915498 ~ 12927089 (+)
XLOC_013933 mc5ra coding upstream 311857 12762887 ~ 12803408 (+)
XLOC_013932 rnmt coding upstream 433450 12649691 ~ 12681815 (+)
XLOC_013931 ldlrad4a coding upstream 492410 12444943 ~ 12622855 (+)
XLOC_013938 NA coding downstream 114857 13230383 ~ 13249249 (+)
XLOC_013939 lrp12 coding downstream 260312 13375838 ~ 13397295 (+)
XLOC_013940 srsf4 coding downstream 295377 13410903 ~ 13420490 (+)
XLOC_013941 tmem200b coding downstream 305358 13420884 ~ 13426991 (+)
XLOC_013942 NA coding downstream 515799 13631325 ~ 13635810 (+)
XLOC_013928 NA non-coding upstream 814374 12295450 ~ 12300891 (+)
XLOC_013922 CU928061.1 non-coding upstream 1836736 11278413 ~ 11278529 (+)
XLOC_013918 CU628002.1 non-coding upstream 2100407 11013622 ~ 11014858 (+)
XLOC_013906 CR384101.1 non-coding upstream 2547779 10567371 ~ 10567486 (+)
XLOC_013943 NA non-coding downstream 681066 13796592 ~ 13805873 (+)
XLOC_013944 BX530067.1 non-coding downstream 718353 13833879 ~ 13833993 (+)
XLOC_013953 NA non-coding downstream 1735291 14850817 ~ 14871231 (+)

Expression


Co-expression Network