XLOC_013950 (arid1ab)


Basic Information

Item Value
gene id XLOC_013950
gene name arid1ab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 14351560 ~ 14438821 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027857
GCAGTACTCAAACACCTAGCAACACCTCATCAAAGTACCATGAACGTCacagcaactgcatagcaaccacaTTGGCAAAGGCATTAAGTCTTGGAAACAATTCATAGCATCCTTGCATTGTGGTAGTTTTGCATATAGAcacatattctaaataaataaatgaataaataaatacccattcagtttttaatttgctaataatagttttaaaatatttttacaatgaaATATATCCATAGTCAGATagaaaaataaatgctatatttatttaatgtattggaTGACcgcttttatttatgtatgtattttgctCAACATGCACAAAGGTATTCTGTGCTCAATCCACGAAGTAGAACCCGAACTATGTCAAAGTACTTTGAGATGACATACTTCTACCACCCGCTCCGGATCCGCGCCGTGGCTCTGCTCCATGACGCGGTTTGCATGTGACCGCGCGCTTCGGTAAAATGGCTGTGTCTCGCGGAGCCTCGTGCTGGTTTGATCGGTTTCTCTCTCGCGCTCTCGTTCTGTAAGAGGCCCCCCctccacatacacactcacacacacatttgtgtcGGTTAAATTCATTCCCGGGACCTTTATTTATATTCTCCAGGAAACTTTTTATACTCGAGTCGCATTCGTGAGAGAAGACCGAATTCGGTCTGGAAGTCGAAGGAATGATACGGGACACGGGCACGTCTTTATAAGAGCGTTGTATTTATATTCAAAGTGACTCGCGGTGAAAGAgagggagagcgagagagagatcaTGGCCGCTCAGGTCGCCACTCTCAACACTAGCCCGCCCGCTGAACTCAAAAAGCCGGAGCGGGAGCCGCAGGACGAGTCTGTGATAGGAGAGAAGCAGCAGGAAAGCAAGGAGCCCCGGGCCGACGGCGGATCCCCGGGCCAGAAGGAGCTGCAAGACGGGGCCGATGTGGGAAATGCTGCTGGGGGAGGAGGAGCAGGAGGCGACCCTGACATGAAGAACGGCAACGGGAACCCGTCCAGGGTGAACAATAACAATAGCCAGAATGATTCCGGCGGACCCGAAGGGAACAGCCACCCCGGCATGGCTCCCCATCACCCGGGCGCCTTCCCTCCACCTCCATACAGCTACAACCAGCACTACAACCGGGCCCCTTTTCATCAACATGGCGGACAACAAAGCCCTGGCATGGCAGGGCCGGCGGTGATGGACCCATACCCGCCCAATTCACACGAGCACGGCTACCCGAACCACTTCAACAACTACAGCCCCTTCCCAAACAGGACTCCGTACCACCAGGGCCAAGGCTACGGCATGAATTCCCCGCGAAACAGCCAGCCGCCGGCGGCCGGGGGGCAGCCAGGCAAGCAGCCGCCAACAGGAGGAACTACGCCGCTGGCTACTGCTGCTTCCTACAACAACCAGAGGTATAACATGGGAAACCCTCAGCCTACGTCCACGCCGACACTCAACCAGCTCCTGACCTCTCCCAGCTCCACGAGGAGCTACCAAAACTACCCGGCCAGCGAGTACGGCGGCCAGGAAGGAGCTGCCAAGGGACCAGGGGACATGGGCAGCAGTAGTCAGTATGGTGGGGGCCACCCGGCCTGGCAACAAAGAAGCCATCACCCTCCTCCCATGAGCCCGGGAAACACTGGACAAGCCAACAGGACCCAGATGGGCTATGGACAGCATGGCCCAGGTGGTTATGGTCAAAACCAAGCTGGCTACTATGGACAACAGGGTCCTTCCCCACATGGAGGCCCCCAGCAATCTTCATATCCCCAGCAGCCCTCCACTGGACCAGGCTCTCAGCCCCCTTATTCCCAGCAACCCTCTGGTACCCCTCATGGCCAGAGTGGGACTTCTTATGGGCAGCCGCAGGGGCCTCACGTTCCCAATCAGGGCCAACCTCCATATTCCCAGACTCCACAATCCCAGTCAGGACAGTCTCCCTTCCCCCAGTCCCAGGGTCCCACTCAGTCACAGGGTCCTTCTCAGGGCCAACAAGGGTCTCAGTCGCAGCCTGGTTACACTCATCCACCTTCTGGTTCAGGGCAGCCTGCTCAACAACAGGGACCCTCACAACAGCAGCAAGGCCCACCACAATCACAGACACCTAGCTCTGCACCCCCTCAGCCATCCCAGCAAACTTCAGGACAGGGCCAGCCTTCACCTTACTCTCAGACTCCTCCACTGcagacacaacaacaacaacaacagcagcagcagtcaCCCTTCCAGCGCTTTCCACCTCCACCTCAGGAGCTTTCTCAAGACTCCTTCAGCTCCCAGTCTTCGGCTCCTTCCTCTAATCAACCCATTGTGTCCAGTAAGAGTGGCCAAGATGACACCATGCAGGGACGACCTTCCAGCCTTCCTGATCTATCAGGCTCCATCGACGATCTACCCACAGGCACAGAGGGTGCTTTGAGCCCAGGCGTGAGCACATCAGGTGTGTCCAGCAGTCAAGGTGAACAGAGCAACCCTGCACAGTCTCCATTCTCTCCACACACCTCCCCTCACCTATCAGGGATCCGCGGCCCCTCACCTTCACCCGTGGGCTCACCTGCTAGTGGCCCTGCTTCCCGCACGGGACCTCTTTCACCTGGAACGATGCCTGGAAACCAGATGCCCCCCAGACCCTCAAGTGTCCAGTCAGATGGTATGTTACATTCCTCCATGGGTCAGGATAGAGTATATATGAGGAACCCTCAGATGCCTTACGGCTCTCCTCAATCTGGGTCAACTTTATCCCCTCGGCAAACATCTGGAAGCCAAATGCATGCTGGGATGGGTTCCTACCCACAGAACAACTCCATGGGCAACTATGGGCCGCAGAGTGGCCAGTATGGACCACAAGGTTACCCGAGACCACCAGGTTATGGAGGCATGCCTAATGCTAACTATCCCGGCGGTCCTGGCATGGGGGGCTCCATGAATCCTATGGCAGGGCAGGGTGGAGGAGGGCCTTATGGAGGGATGCCTCCAGGGCGCATGGGACCGGGACAGATGGGTACGAGGCCGTACGGCCCTGGCATGGGCCCCAACATGGGTGGCATGCCTCCTCAGGTGGCATCTGGAATGTGTCCTCCACCTGGAATGAATAGAAAGCCTCAGGATCCTGCTGCTGCGGGCATGCACCATGGCCCATCCAACTCCATACACAGACCACCTGGGTATCCCAACATGAACCAGGGAATGATGGGAGCTGGGTCTCCATACGCTCCACCCATGAACAGCATGCAGGGTATGATGAATCAAGCAGGACAGTATCCTATGCCTGGCAACATGTCCAATAACTCTGCAGGCATGGCTCCCAGTCCAGAGTTTGGCATGGACAAGCTCAACCAATCTCAAAAGTTGAATAACAAAGTGGATGGAACTCCTAAGACTGAATCGAAAAAGAAGTCAAGTTCCTCCACCACCACTAATGAGAAGATAACTCGTCTGTATGAGCTGGGTCCAGAACCAGAAAGGAAATTGTGGGTGGATCGTTACCTAGCGTTCGCTGAGGAGAAAGCCATGGGCATGAGCAATCTCCCTGCGGTGGGACGCAAACCCCTTGACCTCTTCCGCCTCTATGTGTCCGTCAAAGAGATTGGCGGCCTCACTCAGGTGAACAAGAACAAGAAGTGGAGGGAATTAGCCACAAATCTGAATGTGGGCACATCCAGTAGTGCGGCCAGCTCTCTGAAGAAACAGTACATCCAGTGTCTCTATGCCTTTGAGTGCAAGATCGAGCGAGGAGAAGACCCGCCACCTGACTTTTTCAATAATGACCCTAAAAAGAACCAGGCCAAGGTCCAGCCTCCGTCACCAGctGGATCAGGATCGTTACAGGGTCCTCAGACGCCTCAGTCAACCAGCAGTTCTATGGCTGAAGGTGGAGACCTGAAGCCCCCTACACCTGCCTCAACACCTCACAGTCAGATGCCACCCATGCCTGGTGCTAGGAGTAGTGTGAATCTGCAAGACCCGTTCGCTGATGGTGGGGATCCAGCCTTTTCAAGACGTAACTCTGTGACCCCAAATTCAGGATATCAACCTGGTATGGGTGGACCAGACATGATGGGCCGTATGGGACCTTTTGAGCCAAATAAGGACCCCTTCGGTGGTATGAGAAAAGCGGGTGAGCAGTTTATGAACCCAGGTCAAGGCCCAAATAGTGGCATGGGTGAACAATATAATCGAGCATCCCAAGGTCCAATGGGGAATATGCAGATGGGTCAAAGACAACAGTATCCATATGGTCCAGGATACGACAGAAGACCAGATTCAAGTATGGGCCCAGATGGAAATATGGGTCCACAACCCAACATGATGCCTTCCGGTGCAGATGCAGGGATGTACTCACCTAACCGGCCTCCACAGCAGCAGAGGCATGATTCTTACAGTAATCAATATGCTGGCCAAGGAGCACCCCCTAGTGGACCATACCCAAATCAGCAGTCAGGAATGTATCCACAACAACAACCGAATTACACACAGAAGAGACCGGTTGATGGTGTTTACGGTCCTCCTGCAAAACGTCATGAAGGGGACATGTACCCTTTCAGTGGTCAGCAGCAGGGTCCCCAGGCCCCAGGTGCACCTCAGTCCCAATCAGATATGTATAACCAGTATAACACCTATCCAGGCTCAGAAAGACGCCCACCAGGCCCACAGAGCCAATTTCCTTTTGGCTTTGGACGAGATAGAGGACCTAATGTTGGTGGTCCAAACTCTCAGCCTTCCATGCCACCGCAGATGATGGGTAGCTCCATGAGTGGCACTATGCCTTCGGTTCCTGATGGACCCCAAGGACCCATGTGGCCAGGGCGTAATGAGATGAACTACCCAAACTATCATAACCGCCAAGGGCCACCTGGTGTCCCTTCTCAAAGCCAAGTTTACCATGGCATGAATCGTTCTGAAGACATGATGCCTTCAGATCAGCGCATGAACCAAGAGGGTCCTTGGCCTGGCCATGTTAACCAGCGGCAGCCCCCATATGGGCCTGTAGCCTCAGGGCCACCTATGTCCAGACCTCTTCAGCCCAACTATCAATCCTCTCAGAACCACATTCCACAAGTATCCAGCCCTGCACCCATGCCAAGACCAATGGAGAACAGGACCTCACCCAACAAGTCTCCATACATGCACCCAGGGATGAAAATTCAGAAGGCTGGACCCCCAGTCCCTGCATCACACATTGCTCAGCCACCAGTGCAGCCCCCTATGATTCGAAGAGACATTGCATTCCCGCCAGGTTCAATAGAGGCCTCACAGCCCATTCTGAAACCACGTCGTCGGCTTACCATGAAAGATATTGGAACACCAGAAGCCTGGAGAGTCATGATGTCCCTCAAGTCAGGCTTGTTAGCCGAGAGCACATGGGCTTTGGATACCATTAATATTCTTCTCTATGATGACAATAGCATTTCTAACTTTAACCTGAACCAGCTTCCTGGCTTCCTTGAGCTTGTTGTTGAGTATTTCCGAAGGTGCCTCATTGAGATCTTtggaatattaaaagaatatgaGGTTGGAGACCCTGGGCAGCGTACCCTAATTGACCCAGAAGCTATTGACCCTGAGATGTCTGATGAGGAAGGGCCAGAGGCAGAACAGATggaagaggatgatgaagatgatgaagaagatCTAGAAAACAACACTGTGCAAACATCACAGGTCCAGATTAAGCAGGAGAAAGAGGAGTCTATGGAATCTCCAAAATCCAATGATAAGAATGAATTAGAAGATAGGGAAGGTGAGGATAATTCATGCAAAGATCATCTCAGATCATCTACCCCATTGCAGGACACAAGTGCCTCCCAGGAAAGGCCAAAGCAGGCTAGTAAATTTGACAAGCTTCCCATCAAGATTATGAGGAAAAAAGACCCGTTTGTCATTGGGCATACTAGTAAATTGGGTAGGCGACAAGCTTTTGATAGTGGTCTTATTCATTGGAGTGTGGGTGGTGGTGACACCACAgagcacatacaaacacactttGAGAGCAAGATGGAACTCTTGAAGCATCGGAAACGAGTGCCAGTGAATGTTGAGCCACGTAAAAAGGTATCTCAAATATTGGAGACTGTTACGGGTGAAGCTGAAAAGGTTCAGACAAATGAAGGGCCACAGCAAGTACAAGTTCTGGCATCCAAAGATCAACCATCGTTGGAAGGTAAAAGCACTACAACATCAAGCACGTCAACAAGTATAACGGCCACCATTGATGATGTCCTGTCGGCTCGGAGAGGCTCTGCGACTGAAGAAGCAGTCAGAGGCAACCAAGACAGTGACAAGGAGAAGAATACATTTCTCTTTGGCATTGATCTTGCACAACAGAGTCGCAATATCAAGATCTTGGAGGATGAACCACACAGCAAGGATGAAACCCCACTCTGTACACTCTCGGATTGGCAGGATGCACTAGCTCGTCGCTGCATCTGTGTTTCCAACATTGTTCGCAGCCTTTCCTTCATTCCTGGCAATGATCTGGAGATGTCGAAGCATCCAGGACTTTTGCTGTTACTTGGACGACTTGTGCTGTTGCACCACTGGCATCCTGAACGCAAGCAGGCCCCTGTTACCTATGAGAAAGAAGAGGAGGAAGATGAAGGTGTCAGCTGTGAGCGAGATGAGTGGTGGTGGGACTGTCTTGAGGTTCTGCGGGAAAACTGCTTGGTCACGTTAGCAAACATCTCAGGCCAGCTGGACCTGTCCATCTACCCTGAAAGTATTTGCTTACCACTGCTGGACGGCCTGCTCCACTGGGCTGTGTGCCCATCGGCAGAAGCCATTGATCCATTCCCGACGCTGGGGCTCAATGGGACTCTGTCTCCCCAGAGGCTAGTCCTCGAAACCCTCAGTAAGCTTAGCATCCAGGATAACAATGTAGACCTCATTCTGGCTACGCCACCTTTCAGCCGTTTGGAGAAGCTTTATGGTTCCCTTGTTCGCATGGTTGGCGACCGTAAAGTAACTGTCTGCCGGGAGATGGCAGTGGTACTGCTAGCTAATCTGGCGCAAGGTGATACAGTTGCTGCCCGGGCTATTGCTGTGCAGAAAGGAAGTGTTGGAAACCTTCTTGGCTTTTTGGAGGACAGTCTTGCAGCCACCCAATTCCAACAGAGTCAGGGCTCGTTACTGCACTTACAAGGTTCACCCTTTGAGCCCACTAGTGTGGACATGATGCGGCGGGCGGCACGTGCCCTGCACGCCCTTGCCAAAGTGGAAGAGAACCACTCAGAGTTCACGCTGTACGAGTCACGGCTACTGGACATATCTGTGTCCCCACTCATGAACTCTTTGGTGTCCCATGTAATCTGTGACGTACTTTTTCTGATTGGCCAGTCATGACAGCCGTGGGGGTGATCATGTTTTTCcccactattttttttaatgtgtgtgtgtctgcgttagTGGAGAAAATTTAATAGCAAAActatgttcatttttttatttatgcaaaatcACCTCAGATTCCACTGTCTATCCTGTCTACCCTTGCTTCGCTCTCAAGGAAGGATATACCATTATGTTGCGATGGATTTTAACACCTATGGATAGTTTAACTAACATGGATATGCTGATCACGATCCTCGCCTACAAGAGTGCGCTGCCCTTTGAACGTTTTTTTATAAGgaaaattaaaattacaaaaaagacacacacacacacacggaaacCAAACTGTAACCAAAGTTGCTGTCAAGTTTACAGTGAGTTTGGGGAAAAATCTTGCTCATTCACCTTCTGGGTGTGGATGGGCTTGGAGATGACCATAATCTGGTTCTTGGAGTCTAAATGGACTCAGACTCTGGTGTGTGGTATACATTGCTGTAACTTGGATTATATATACTTAGCCCTAAAGGAACCAGGTCGTTGGCTGTGAACAGACATGTAAATGGGAGGCCTGTGCAGTAGATTGTAGGACTTTTTTCTGTACTGTACACCTTAAAACTGTAAACATACTGTAACAATACTGTTTCACACTGAGATAATGCTGGCTTGGCAGCAAAAAAActgtagtttttaaaaatgattttagttcATGTGGAAAAAATGGCTTTCCCCCCAAAGTAACGTGAACCTACAACACCCCGACCTCTTTGTCCCTCGATTGTATGACTTGACCCTTAAAGAAATCACCTCTTAGGACTGGTCTTGAGCTCTAGATGCAGTCCTGGCTGCAGTGTATATAATGATGTTGTAAATTAcactttgctctttttctttctctcatcTTATGGCGCTCTTCACCGTTTTTAATCTTTGACGAATTAAAGGTTTCACTCAACAGATCTCTCATTGCGCATTGCCATGTGTTTATTTACCACCTTACTCTCCTTACATCTCCGGTTGTAGTGCAATCTTTTGCCCTTGCAATCCCATACACACAACATTTCAGTTCCTTTCGTTAAGTACGTAGAGGGTTTATATCAAAGCAGACAAGTCCATTACTCTAGCTGATTTCATCATCATTCACCAGAACAAAGATTCAATAAACGAGTTTGGTCTCCCTTCTTTTCCAGCAGTTTCCTTAGTCGATTCCAGTGCTATGGATTCATATTTGTATTTCAGATGATGTAGCTAAACACTTGTTGtaaattccttttttttcccctttttggcTTAATGAATATCATTTATTCCGTATGAAATCTTTATACTATATGTTCCACGTGTTAAGAATAAATGTACATTAAATCTTGGTAACATGTTTGTGATTGATTCATTTGTAACAGCTTCTATAATTTTGCGGTTCTATAATCCTAAATTTAATTCTATGGACTACACTTGCTGCATTGTTGATCGAcactcaaaatattttcttttgataaaaaaaaaaaagtggttgaAAGTACCTTAAATTGAAGTAAAGAGTAGATGACCAAATGTCATTGTTTTGctaaatttaaattcatttacatttgctGGGGAGTTCTCTTACAAAACTGTCTGTGCAATTCCCAGTATATCACCACACTtcattatactatatattatatatatatcatgtgtgtgtgtatgtagaaCAGTTCTAcactaaaatgcttaaaaaatgctTCAGCATTACTCTTTAGCTGTAGTTTTTGATGGAGGATTTCTATACTGGTATTATTTTCTCTGCTTTAGTTGAAATGTTTTATGACTTGCTAATTGCTAAATCTCAGCATTCCTGAACCCAAGGTGAATACCTGAGCTATTTGTAATGGAATAGTATACTGCACAAAAATCGGCAAAGCCACATGTTTAAGTAGGCTACTACATAGAAAGTATAAAGGTGATGAGCATCCATTAATGTTGAGCGTTTTAGACAACGCCAATTTATCCTACTATGTCCTACACAACAATGTCCTACCAATCCTATCAATTAATAAACGGAAGTTGATTAAAAAGGTTAAATGCAACCTGAAGATCATATCAAGCACACTGCATTTAGCGATTCATAGCAAATATTTTCATATGGAAATATATCATCATGTTTACTTTGTAAATGTCTCCATATTAACATCTTTATCTGCCACAAGCCTTTTATGCATCTTACTATTGACATGTATCAAGTTTAACGATCAAACGGTGTTATAAACAAACCTAACTGGTCCACGCGGGATTTCATCTTTTCGGGAACATTGTACACATGCTTATTTAACTCACAAGGCACGTACGTGGCTCCTCTAATCAAGCAGTGCAGTATTAATCCTACAGCCCCATCTAGTGGTCATGGGCAGCACAATCCCGTCATGTATGCGTTGcatattatttttaagattaatagtttaataaacaaaGCATCTATGGACGCTAAGAAATTTGTAAAGTAGAACGGTTCTAAGTGAAAATGATTATCCTGTTTGTATATTATAAACTGGTTGGTTAAAGCTCTGTTTGAGGTCGCATTGCAGCAATGAGAAAAGCTGTTGTCACGTGGAGGCTGTTACTTTTACCATCGCTTTTAAATGTGGCTGACTTTTACGCATTCGTGCTACACCGCAGGTCCCGTTTTGGTACATTCACATTGTATATGTTAGAAGACTGAAGACTCGTCAGCCAGAATAGCATCCCCAGTTTACGTGCGAGGTATGAAATGTTGAGATAAATCTTTTCGTTATGACAGAAAAAGGCAAGATGGGTTTGAAACGGAAAGGTGCTCCATGAAGGATTCATCTTTAACTTGACAAGCGCCCCTAGAGGAACGACCAGACATTTCAATCTTACAGGACCCTTGTTCGAAATGTGAGTGGAGGTATGTCTCAAGTAAACatcttttgttaatattttagtgTCATTTAATTTGTTAACTTGAATTTGTGTTTGTTGTTAAAATACTTGATTAAAATGGTTTATATCGgttgttttcaaactttttttttcaccaagTGTCACttctgtacatatatacatatacacatatatatatatatatatatatatatatat
>TCONS_00027858
aTGGCCGCTCAGGTCGCCACTCTCAACACTAGCCCGCCCGCTGAACTCAAAAAGCCGGAGCGGGAGCCGCAGGACGAGTCTGTGATAGGAGAGAAGCAGCAGGAAAGCAAGGAGCCCCGGGCCGACGGCGGATCCCCGGGCCAGAAGGAGCTGCAAGACGGGGCCGATGTGGGAAATGCTGCTGGGGGAGGAGGAGCAGGAGGCGACCCTGACATGAAGAACGGCAACGGGAACCCGTCCAGGGTGAACAATAACAATAGCCAGAATGATTCCGGCGGACCCGAAGGGAACAGCCACCCCGGCATGGCTCCCCATCACCCGGGCGCCTTCCCTCCACCTCCATACAGCTACAACCAGCACTACAACCGGGCCCCTTTTCATCAACATGGCGGACAACAAAGCCCTGGCATGGCAGGGCCGGCGGTGATGGACCCATACCCGCCCAATTCACACGAGCACGGCTACCCGAACCACTTCAACAACTACAGCCCCTTCCCAAACAGGACTCCGTACCACCAGGGCCAAGGCTACGGCATGAATTCCCCGCGAAACAGCCAGCCGCCGGCGGCCGGGGGGCAGCCAGGCAAGCAGCCGCCAACAGGAGGAACTACGCCGCTGGCTACTGCTGCTTCCTACAACAACCAGAGGTATAACATGGGAAACCCTCAGCCTACGTCCACGCCGACACTCAACCAGCTCCTGACCTCTCCCAGCTCCACGAGGAGCTACCAAAACTACCCGGCCAGCGAGTACGGCGGCCAGGAAGGAGCTGCCAAGGGACCAGGGGACATGGGCAGCAGTAGTCAGTATGGTGGGGGCCACCCGGCCTGGCAACAAAGAAGCCATCACCCTCCTCCCATGAGCCCGGGAAACACTGGACAAGCCAACAGGACCCAGCCTCCTGGACCTATGGATCAGGTGGGAAAAATTCGTGGGCAGCACTATGGTGCCGGAAACCCCTACTCTCAGCAGCAGGGGCCTCCCCCTAGCTCACAGCAGGGTCCTCCTTACCCAGGGCAGGGTTATGGACCTCCGGGACCTCAGAGGTATCCCATGGGCATGCAAGGCCGCACTTCTGGGAACTTAAGTGGAATACAATATGGACAGCAGATGGGCTATGGACAGCATGGCCCAGGTGGTTATGGTCAAAACCAAGCTGGCTACTATGGACAACAGGGTCCTTCCCCACATGGAGGCCCCCAGCAATCTTCATATCCCCAGCAGCCCTCCACTGGACCAGGCTCTCAGCCCCCTTATTCCCAGCAACCCTCTGGTACCCCTCATGGCCAGAGTGGGACTTCTTATGGGCAGCCGCAGGGGCCTCACGTTCCCAATCAGGGCCAACCTCCATATTCCCAGACTCCACAATCCCAGTCAGGACAGTCTCCCTTCCCCCAGTCCCAGGGTCCCACTCAGTCACAGGGTCCTTCTCAGGGCCAACAAGGGTCTCAGTCGCAGCCTGGTTACACTCATCCACCTTCTGGTTCAGGGCAGCCTGCTCAACAACAGGGACCCTCACAACAGCAGCAAGGCCCACCACAATCACAGACACCTAGCTCTGCACCCCCTCAGCCATCCCAGCAAACTTCAGGACAGGGCCAGCCTTCACCTTACTCTCAGACTCCTCCACTGcagacacaacaacaacaacaacagcagcagcagtcaCCCTTCCAGCGCTTTCCACCTCCACCTCAGGAGCTTTCTCAAGACTCCTTCAGCTCCCAGTCTTCGGCTCCTTCCTCTAATCAACCCATTGTGTCCAGTAAGAGTGGCCAAGATGACACCATGCAGGGACGACCTTCCAGCCTTCCTGATCTATCAGGCTCCATCGACGATCTACCCACAGGCACAGAGGGTGCTTTGAGCCCAGGCGTGAGCACATCAGGTGTGTCCAGCAGTCAAGGTGAACAGAGCAACCCTGCACAGTCTCCATTCTCTCCACACACCTCCCCTCACCTATCAGGGATCCGCGGCCCCTCACCTTCACCCGTGGGCTCACCTGCTAGTGGCCCTGCTTCCCGCACGGGACCTCTTTCACCTGGAACGATGCCTGGAAACCAGATGCCCCCCAGACCCTCAAGTGTCCAGTCAGATGGTATGTTACATTCCTCCATGGGTCAGGATAGAGTATATATGAGGAACCCTCAGATGCCTTACGGCTCTCCTCAATCTGGGTCAACTTTATCCCCTCGGCAAACATCTGGAAGCCAAATGCATGCTGGGATGGGTTCCTACCCACAGAACAACTCCATGGGCAACTATGGGCCGCAGAGTGGCCAGTATGGACCACAAGGTTACCCGAGACCACCAGGTTATGGAGGCATGCCTAATGCTAACTATCCCGGCGGTCCTGGCATGGGGGGCTCCATGAATCCTATGGCAGGGCAGGGTGGAGGAGGGCCTTATGGAGGGATGCCTCCAGGGCGCATGGGACCGGGACAGATGGGTACGAGGCCGTACGGCCCTGGCATGGGCCCCAACATGGGTGGCATGCCTCCTCAGGTGGCATCTGGAATGTGTCCTCCACCTGGAATGAATAGAAAGCCTCAGGATCCTGCTGCTGCGGGCATGCACCATGGCCCATCCAACTCCATACACAGACCACCTGGGTATCCCAACATGAACCAGGGAATGATGGGAGCTGGGTCTCCATACGCTCCACCCATGAACAGCATGCAGGGTATGATGAATCAAGCAGGACAGTATCCTATGCCTGGCAACATGTCCAATAACTCTGCAGGCATGGCTCCCAGTCCAGAGTTTGGCATGGACAAGCTCAACCAATCTCAAAAGTTGAATAACAAAGTGGATGGAACTCCTAAGACTGAATCGAAAAAGAAGTCAAGTTCCTCCACCACCACTAATGAGAAGATAACTCGTCTGTATGAGCTGGGTCCAGAACCAGAAAGGAAATTGTGGGTGGATCGTTACCTAGCGTTCGCTGAGGAGAAAGCCATGGGCATGAGCAATCTCCCTGCGGTGGGACGCAAACCCCTTGACCTCTTCCGCCTCTATGTGTCCGTCAAAGAGATTGGCGGCCTCACTCAGGTGAACAAGAACAAGAAGTGGAGGGAATTAGCCACAAATCTGAATGTGGGCACATCCAGTAGTGCGGCCAGCTCTCTGAAGAAACAGTACATCCAGTGTCTCTATGCCTTTGAGTGCAAGATCGAGCGAGGAGAAGACCCGCCACCTGACTTTTTCAATAATGACCCTAAAAAGAACCAGGCCAAGGTCCAGCCTCCGTCACCAGctGGATCAGGATCGTTACAGGGTCCTCAGACGCCTCAGTCAACCAGCAGTTCTATGGCTGAAGGTGGAGACCTGAAGCCCCCTACACCTGCCTCAACACCTCACAGTCAGATGCCACCCATGCCTGGTGCTAGGAGTAGTGTGAATCTGCAAGACCCGTTCGCTGATGGTGGGGATCCAGCCTTTTCAAGACGTAACTCTGTGACCCCAAATTCAGGATATCAACCTGGTATGGGTGGACCAGACATGATGGGCCGTATGGGACCTTTTGAGCCAAATAAGGACCCCTTCGGTGGTATGAGAAAAGCGGGTGAGCAGTTTATGAACCCAGGTCAAGGCCCAAATAGTGGCATGGGTGAACAATATAATCGAGCATCCCAAGGTCCAATGGGGAATATGCAGATGGGTCAAAGACAACAGTATCCATATGGTCCAGGATACGACAGAAGACCAGATTCAAGTATGGGCCCAGATGGAAATATGGGTCCACAACCCAACATGATGCCTTCCGGTGCAGATGCAGGGATGTACTCACCTAACCGGCCTCCACAGCAGCAGAGGCATGATTCTTACAGTAATCAATATGCTGGCCAAGGAGCACCCCCTAGTGGACCATACCCAAATCAGCAGTCAGGAATGTATCCACAACAACAACCGAATTACACACAGAAGAGACCGGTTGATGGTGTTTACGGTCCTCCTGCAAAACGTCATGAAGGGGACATGTACCCTTTCAGTGGTCAGCAGCAGGGTCCCCAGGCCCCAGGTGCACCTCAGTCCCAATCAGATATGTATAACCAGTATAACACCTATCCAGGCTCAGAAAGACGCCCACCAGGCCCACAGAGCCAATTTCCTTTTGGCTTTGGACGAGATAGAGGACCTAATGTTGGTGGTCCAAACTCTCAGCCTTCCATGCCACCGCAGATGATGGGTAGCTCCATGAGTGGCACTATGCCTTCGGTTCCTGATGGACCCCAAGGACCCATGTGGCCAGGGCGTAATGAGATGAACTACCCAAACTATCATAACCGCCAAGGGCCACCTGGTGTCCCTTCTCAAAGCCAAGTTTACCATGGCATGAATCGTTCTGAAGACATGATGCCTTCAGATCAGCGCATGAACCAAGAGGGTCCTTGGCCTGGCCATGTTAACCAGCGGCAGCCCCCATATGGGCCTGTAGCCTCAGGGCCACCTATGTCCAGACCTCTTCAGCCCAACTATCAATCCTCTCAGAACCACATTCCACAAGTATCCAGCCCTGCACCCATGCCAAGACCAATGGAGAACAGGACCTCACCCAACAAGTCTCCATACATGCACCCAGGGATGAAAATTCAGAAGGCTGGACCCCCAGTCCCTGCATCACACATTGCTCAGCCACCAGTGCAGCCCCCTATGATTCGAAGAGACATTGCATTCCCGCCAGGTTCAATAGAGGCCTCACAGCCCATTCTGAAACCACGTCGTCGGCTTACCATGAAAGATATTGGAACACCAGAAGCCTGGAGAGTCATGATGTCCCTCAAGTCAGGCTTGTTAGCCGAGAGCACATGGGCTTTGGATACCATTAATATTCTTCTCTATGATGACAATAGCATTTCTAACTTTAACCTGAACCAGCTTCCTGGCTTCCTTGAGCTTGTTGTTGAGTATTTCCGAAGGTGCCTCATTGAGATCTTtggaatattaaaagaatatgaGGTTGGAGACCCTGGGCAGCGTACCCTAATTGACCCAGAAGCTATTGACCCTGAGATGTCTGATGAGGAAGGGCCAGAGGCAGAACAGATggaagaggatgatgaagatgatgaagaagatCTAGAAAACAACACTGTGCAAACATCACAGGTCCAGATTAAGCAGGAGAAAGAGGAGTCTATGGAATCTCCAAAATCCAATGATAAGAATGAATTAGAAGATAGGGAAGGTGAGGATAATTCATGCAAAGATCATCTCAGATCATCTACCCCATTGCAGGACACAAGTGCCTCCCAGGAAAGGCCAAAGCAGGCTAGTAAATTTGACAAGCTTCCCATCAAGATTATGAGGAAAAAAGACCCGTTTGTCATTGGGCATACTAGTAAATTGGGTAGGCGACAAGCTTTTGATAGTGGTCTTATTCATTGGAGTGTGGGTGGTGGTGACACCACAgagcacatacaaacacactttGAGAGCAAGATGGAACTCTTGAAGCATCGGAAACGAGTGCCAGTGAATGTTGAGCCACGTAAAAAGGTATCTCAAATATTGGAGACTGTTACGGGTGAAGCTGAAAAGGTTCAGACAAATGAAGGGCCACAGCAAGTACAAGTTCTGGCATCCAAAGATCAACCATCGTTGGAAGGTAAAAGCACTACAACATCAAGCACGTCAACAAGTATAACGGCCACCATTGATGATGTCCTGTCGGCTCGGAGAGGCTCTGCGACTGAAGAAGCAGTCAGAGGCAACCAAGACAGTGACAAGGAGAAGAATACATTTCTCTTTGGCATTGATCTTGCACAACAGAGTCGCAATATCAAGATCTTGGAGGATGAACCACACAGCAAGGATGAAACCCCACTCTGTACACTCTCGGATTGGCAGGATGCACTAGCTCGTCGCTGCATCTGTGTTTCCAACATTGTTCGCAGCCTTTCCTTCATTCCTGGCAATGATCTGGAGATGTCGAAGCATCCAGGACTTTTGCTGTTACTTGGACGACTTGTGCTGTTGCACCACTGGCATCCTGAACGCAAGCAGGCCCCTGTTACCTATGAGAAAGAAGAGGAGGAAGATGAAGGTGTCAGCTGTGAGCGAGATGAGTGGTGGTGGGACTGTCTTGAGGTTCTGCGGGAAAACTGCTTGGTCACGTTAGCAAACATCTCAGGCCAGCTGGACCTGTCCATCTACCCTGAAAGTATTTGCTTACCACTGCTGGACGGCCTGCTCCACTGGGCTGTGTGCCCATCGGCAGAAGCCATTGATCCATTCCCGACGCTGGGGCTCAATGGGACTCTGTCTCCCCAGAGGCTAGTCCTCGAAACCCTCAGTAAGCTT
>TCONS_00027859
TTCAGGGCAGCCTGCTCAACAACAGGGACCCTCACAACAGCAGCAAGGCCCACCACAATCACAGACACCTAGCTCTGCACCCCCTCAGCCATCCCAGCAAACTTCAGGACAGGGCCAGCCTTCACCTTACTCTCAGACTCCTCCACTGcagacacaacaacaacaacaacagcagcagcagtcaCCCTTCCAGCGCTTTCCACCTCCACCTCAGGAGCTTTCTCAAGACTCCTTCAGCTCCCAGTCTTCGGCTCCTTCCTCTAATCAACCCATTGTGTCCAGTAAGAGTGGCCAAGATGACACCATGCAGGGACGACCTTCCAGCCTTCCTaagctgtttctgactgttggGCTTAGAAACTTCTTCAGCTGAATTTCAAAAGACAACATTGTGTATTAGTACAAATtgtcagtgaaacattttttaTACTTTGATATGAAGTCAAATTGTACTTCCTTTTATTGCATATTTTTC

Function

symbol description
arid1ab Predicted to enable DNA binding activity. Predicted to contribute to nucleosome binding activity. Predicted to be involved in ATP-dependent chromatin remodeling; positive regulation of transcription, DNA-templated; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within chromatin remodeling. Predicted to be located in nucleus. Predicted to be part of SWI/SNF complex and nBAF complex. Predicted to be active in nucleoplasm. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 2; breast cancer; carcinoma (multiple); gastrointestinal system cancer (multiple); and neuroblastoma. Orthologous to human ARID1A (AT-rich interaction domain 1A).

GO:

id name namespace
GO:0006338 chromatin remodeling biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0043044 ATP-dependent chromatin remodeling biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0071565 nBAF complex cellular_component
GO:0016514 SWI/SNF complex cellular_component
GO:0035060 brahma complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0031491 nucleosome binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5725 Predicted to enable DNA binding activity. Predicted to contribute to nucleosome binding activity. Predicted to be involved in ATP-dependent chromatin remodeling; positive regulation of transcription, DNA-templated; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within chromatin remodeling. Predicted to be located in nucleus. Predicted to be part of SWI/SNF complex and nBAF complex. Predicted to be active in nucleoplasm. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 2; breast cancer; carcinoma (multiple); gastrointestinal system cancer (multiple); and neuroblastoma. Orthologous to human ARID1A (AT-rich interaction domain 1A).

Ensembl:

ensembl_id ENSDARG00000101891

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027857 False 10429 mRNA 0.47 19 14351560 14438821
TCONS_00027858 False 6303 mRNA 0.54 20 14352332 14435254
TCONS_00027859 True 475 processed_transcript 0.48 3 14394879 14398687

Neighbor

gene id symbol gene type direction distance location
XLOC_013949 nudc coding upstream 182103 14158075 ~ 14169457 (+)
XLOC_013948 kdf1b coding upstream 224426 14113886 ~ 14127134 (+)
XLOC_013947 zgc:175136 coding upstream 238593 14109348 ~ 14112967 (+)
XLOC_013946 tpbga coding upstream 289573 14059349 ~ 14061987 (+)
XLOC_013945 tmem222b coding upstream 315668 13994563 ~ 14035892 (+)
XLOC_013951 zdhhc18b coding downstream 15485 14454306 ~ 14470811 (+)
XLOC_013952 tent5bb coding downstream 135177 14573998 ~ 14588414 (+)
XLOC_013953 NA coding downstream 411996 14850817 ~ 14871231 (+)
XLOC_013954 oprd1a coding downstream 482179 14921000 ~ 14951756 (+)
XLOC_013955 NA coding downstream 587095 15025916 ~ 15027342 (+)
XLOC_013944 BX530067.1 non-coding upstream 517567 13833879 ~ 13833993 (+)
XLOC_013943 NA non-coding upstream 545687 13796592 ~ 13805873 (+)
XLOC_013942 NA non-coding upstream 715750 13631325 ~ 13635810 (+)
XLOC_013938 NA non-coding upstream 1102311 13230383 ~ 13249249 (+)
XLOC_013937 NA non-coding upstream 1236034 13115265 ~ 13115526 (+)
XLOC_013956 NA non-coding downstream 862867 15301688 ~ 15303833 (+)
XLOC_013963 snrnau11 non-coding downstream 1623005 16061826 ~ 16061961 (+)
XLOC_013965 CR385068.4 non-coding downstream 1630149 16068970 ~ 16069103 (+)

Expression


Co-expression Network