XLOC_013965 (CR385068.4)


Basic Information

Item Value
gene id XLOC_013965
gene name CR385068.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 16068970 ~ 16069103 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027883
aaaaagagcatctgctgtgaaTAGCGTAGCTGCGGAAGGGATTCTTTGACACAGTTGCGGAATCGCTATCAAGAGACAAGATGCACAATTTTTATAATCTGAGGCTACCAATGATCTGTTATCTTGGTGCCTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083417

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027883 True 134 snRNA 0.43 1 16068970 16069103

Neighbor

gene id symbol gene type direction distance location
XLOC_013963 snrnau11 coding upstream 7009 16061826 ~ 16061961 (+)
XLOC_013962 rab42a coding upstream 32823 16032383 ~ 16036147 (+)
XLOC_013961 ctps1a coding upstream 37467 16015881 ~ 16031503 (+)
XLOC_013960 foxo6b coding upstream 448003 15571290 ~ 15620967 (+)
XLOC_013959 ppp1r8a coding upstream 536455 15521997 ~ 15532515 (+)
XLOC_013966 ptprua coding downstream 153515 16222618 ~ 16657563 (+)
XLOC_013967 NA coding downstream 642723 16711826 ~ 16712299 (+)
XLOC_013968 CR318590.2 coding downstream 838606 16907709 ~ 16909487 (+)
XLOC_013969 MANEAL coding downstream 1190809 17259912 ~ 17277208 (+)
XLOC_013970 NA coding downstream 1284537 17353640 ~ 17354668 (+)
XLOC_013956 NA non-coding upstream 765137 15301688 ~ 15303833 (+)
XLOC_013955 NA non-coding upstream 1041628 15025916 ~ 15027342 (+)
XLOC_013953 NA non-coding upstream 1197739 14850817 ~ 14871231 (+)
XLOC_013944 BX530067.1 non-coding upstream 2234977 13833879 ~ 13833993 (+)
XLOC_013972 FO704764.1 non-coding downstream 1304529 17373632 ~ 17373686 (+)
XLOC_013976 NA non-coding downstream 1777565 17846668 ~ 17846933 (+)

Expression


Co-expression Network