CI01000364_00512592_00513897


Basic Information

Item Value
gene id CI01000364_00512592_00513897
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 511831 ~ 514181 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000364_00512592_00513897.mRNA
ACATAAAACAACGTCTAGACAAAAAAGACAAAAGCTTCAGTTGAATTAGGACAGTTTTTTTTTTTTTTTTTTACAGTTTCACACCTGAATCTGAGGAAAGTTCAAGAGAAGATAATCACAGGACAACCCTCTGCAGAAGAGGATATTCATGTTGAAAAGGATAACAACAAAAAACAACAAATAAGAAGAAAACTTACAAGAAAAGAGAGGTAAAGACATTTTGAACAGACTGTGCTATTTCATATCTCTTTGGGTTTTTGTTTAGAAGAACAGCACAAAGAACATTTTGGACAAAACTGGAACACACAAAATCAGTGAAAGTCATATTTTCCCCCTTTTTGGCTTATTTTTTCATATTTCTCTCTTTATATCCTCACTGAGAGAAAATAAACAAACAAAAAAAAAAGGCAGTTAATTCAGTTGATTGTTTACATTCTAAATCAACTATGGCCAGCGCATCATCTACGCCCCGCCCCTTCATTTACCCTCAGAAGAGTTCTGAACACTCCAGGAGCTGCTCAGACACAAGAGATGAAAGAAAGGCCTGAAACACTGTTTGCTGAACAAGACAACAGAGTCATGACCAACCTGCTCTTATACACTGAACACAGCTCTTTATGGCACACTGCCATCTGTCAACATTTCATCTTTACCAAAAAAAGAGGCATCTGTAAAGGCAGACAGATCTTAGCATTTGAAGATGCTGAAAAAATGATGAAACAAGATATTTAACCCTGAACTTGTCTCAAAATGGTACTGTCATGGTCCAAGGATCAGAGTCTGCTCTCAAAGTCTTCATTGAAGATTTTGAACATATAAAAACACTGGCACTGTCTGATGAAGACGACAACAAGGATATAAACACTGATGCCTCCCCTGGAAAATCAGTCCAAAAGATGACAGTGACCTCAGCAACTGTGATTCCTTCTCCAAGGTTAAGAATGAAAGACAATTTTTCACTTCTGGAGATCCACAGCTCCGCTGCAGAGGACCCGAGAGAAACGCACGCTCTTATCCTGACTGACTCAAATGGGAAATACATCAATGAGAAACTTCTATTCCCAAATATGAGAGCCAAGAAAATCTGGTGCCCAAACACAAGAAGTGCTTTTCAGATCCTGTCTGAGAGAAACCTGAATGAAAACTATAAACACATCATTATCAACACAGGGACAAATGATTTAAGGGCCATGAAGGGACATGTGGCTCCTGTGATCAGAGAGGTAGTGATCAGAGCCACACAACGTTTCCCAGTGGCTAAAATAACTCTGTCTGCACTACTACCATGCACTGATGTGCCATTCCACGTGATCCATGGAAATAATGTGGAGCTTTCCAGAAGTTGTGCACTTATTCCTAATGTTCACCTCGCCCATCACAAAGACATACGGCCTCATCATATGTATGACCATGTACATCTCAAGAAGCAAGGAGTGAAAGTCTTTGCCAGAGTGCTGAAAAGCACAGTCCTTGGAAACACACCAAGAAACAGCAGAAACTCCAATGACAAGAGAAGATCTCAGTCACCAAGAACCATCCGTCCTCCAGCAGAATCCAGAACGACCACAAGACCTCCATCACAACACAAGAGCTACGCAGCGGCAGTTCAACAGCCACAAAACCCTGCAGCTGCTGAACTCAACCAGATAAGACATCTACTGAACATCATCTGCTCCAGACTGAGGACATAACCTGCATAACTCACACACACTTATATATATGTATACACACACACACACGTTACAGAAAAAACTTATTCATGAAATCATTTAAAATCAGTTGTTGGAATATACAGGGTCTGCACTCTTCTACTTTTGGTAACAAGACTGCAGACCAAGACTTACTCAGCAGTGTAACAGATATGGACAGATATAAGATCTGTATCTTTCATGAGACGTGGTGTTGTAGCAATGAGACTTTACATTGTCCAATAGGATACAAGGAAATTGTTGTTCCTTCATCAAAAAATTCTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000364_00512592_00513897.mRNA True 1975 mRNA 0.40 2 511831 514181

Neighbor

gene id symbol gene type direction distance location
CI01000364_00471523_00472629 NA coding upstream 39010 471523 ~ 472821 (+)
CI01000364_00458726_00460323 NA coding upstream 50202 458726 ~ 461629 (+)
CI01000364_00400175_00427556 NA coding upstream 84255 399374 ~ 427576 (+)
CI01000364_00382475_00385399 NA coding upstream 125714 382475 ~ 386117 (+)
CI01000364_00294611_00295771 NA coding upstream 215881 294401 ~ 295950 (+)
G520260 NA non-coding upstream 47749 463745 ~ 464082 (+)
G520258 NA non-coding upstream 48487 462572 ~ 463344 (+)
G520257 NA non-coding upstream 49606 462019 ~ 462225 (+)
G520252 NA non-coding upstream 54770 456784 ~ 457061 (+)
G520244 NA non-coding upstream 65054 446461 ~ 446777 (+)
G520013 NA other upstream 174724 309368 ~ 337107 (+)
G520009 NA other upstream 187600 241321 ~ 324231 (+)
G520012 NA other upstream 256825 250300 ~ 255006 (+)
CI01000364_00151094_00203772 NA other upstream 326788 150818 ~ 203857 (+)
G520007 NA other upstream 465985 44426 ~ 45846 (+)

Expression


Co-expression Network