G520099


Basic Information

Item Value
gene id G520099
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 263008 ~ 264764 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU596652
TTTATTCTCTTATTTATTTCTGTAGGATGAAGAGATACAGATCAAGGATCAGTAACAAGATACACTTAAAAAGGTATTATTTAATATTATTAGATTTAATACTTCAACAAAACACTTTTGAGTCACATGTGATATTCATGGATCCTGTCTGTCTCAGTGCTGAAACTCTTTATACAAACGTACATGTATAGACAGATCAGAACTTATGAATATAGTGTATTATACTGACTTTTATACAGTAATCTATTGAACATTTCAAACACACATTAGTCCTCATTAATACAGGTTTATATGTTAATGATTCTTCATGATTTTCATCATAAATCATACAGTGACAGTTCTGAATTATTGGAATCACATTCTGTAAAGATCATCTTCTCTTAAGGGAAACAGTAGGAAACCACTGAATGTGCAGTGATTATTCTGGTTATCAAATATCCTCCTGTTAGACCAAAGTCTCACATAGACAACATCTCCAACCTCCAGGATCAACACAACTCCATTTGAGGAGTTTAACCCACCCTGAGAATGATAATCATCTGCTGAAACCACCAGCTTTCCATTCTTATAAATGGATACAGCTGCTGATGGTGGGGCATGACTATATACAGAGACTCTGAACATGTACGCTCCTTTCAGTGGGGCTGTGAAATACCTGTAATTGGGTTGTAGGCGTTCCCTATGTTTGTGAAGACGTTCCTGTAGGTTAGTGTGATTTCAGTGGTAAAAGGACCAATAAATCCACTGCCAGATTGCACCAGTGAAGCTGAAAAAGCTATTTCTCTGTCTGTTATTGAAAAACATAAGCAATATTGTGATATATTACTGTATTACACTGAGAATGTATACACTGAATTTAACATCATTCAAGCACACTTTCACCTCTATTTTCCTTTCTCAACTCCACTTGACTCAGAGTAAGATTTGAAATTTTCATTTTTCTTGTTCATCTCATCCCTCAGTTCTGTAACGGTGGCGGTCAGTTCTCTGATGTTTCCTTTCTGCTCTGTAACGGTGGCGGTCAGTTCTCTGTTCTTTTCTTTCTGCTCTGTAACGGTGGCGGTCAGTTCTCTGATGTTTTCTTTCTGCTCTGTAACGGTGGCGGTCAGTTCTCTCAGTGCTGCATGGATGTCAGGGATGCCCAGATTGCAGTATTGTTGGCTGTCCGTTGAAGCTTCAGCTCTCAAAGTGTCTGTTTGAGGTGGATTCTGTCTTCCGTCCTCAGAGCTGATCTGTTGACTGATCTCATTCTCATCGAGTCCTCCATCTACCTGCTGCTGGACGACAAACACAAAGGTTTCCAACAGCAGCAGTATACATACTAAAGCCTTCATTCTTCACTGATGTTTGTTTCCAGCTCTTGCTCTGTCATCCCCAC
>TU596653
TTTATTCTCTTATTTATTTCTGTAGGATGAAGAGATACAGATCAAGGATCAGTAACAAGATACACTTAAAAAGGTATTATTTAATATTATTAGATTTAATACTTCAACAAAACACTTTTGAGTCACATGTGATATTCATGGATCCTGTCTGTCTCAGTGCTGAAACTCTTTATACAAACGTACATGTATAGACAGATCAGAACTTATGAATATAGTGTATTATACTGACTTTTATACAGTAATCTATTGAACATTTCAAACACACATTAGTCCTCATTAATACAGGTTTATATGTTAATGATTCTTCATGATTTTCATCATAAATCATACAGTGACAGTTCTGAATTATTGGAATCACATTCTGTAAAGATCATCTTCTCTTAAGGGAAACAGTAGGAAACCACTGAATGTGCAGTGATTATTCTGGTTATCAAATATCCTCCTGTTAGACCAAAGTCTCACATAGACAACATCTCCAACCTCCAGGATCAACACAACTCCATTTGAGGAGTTTAACCCACCCTGAGAATGATAATCATCTGCTGAAACCACCAGCTTTCCATTCTTATAAATGGATACAGCTGCTGATGGTGGGGCATGACTATATACAGAGACTCTGAACATGTACGCTCCTTTCAGTGGGGCTGTGAAATACCTGTAATTGGGTTGTAGGCGTTCCCTATGTTTGTGAAGACGTTCCTGTAGGTTAGTGTGATTTCAGTGGTAAAAGGACCAATAAATCCACTGCCAGATTGCACCAGTGAAGCTGAAAAAGCTATTTCTCTGTCTGTTATTGAAAAACATAAGCAATATTGTGATATATTACTGTATTACACTGAGAATGTATACACTGAATTTAACATCATTCAAGCACACTTTCACCTCTATTTTCCTTTCTCAACTCCACTTGACTCAGAGTAAGATTTGAAATTTCTGTGAAGGAATAAAGATTCTGTTAAATGACATTTACACTGATTATTGTAATAGATAACACAATTTACACAGTATACACTCAACTTTACACTAACATTTATACTATACAATGTATTGCATTGGTGTTTTACTTTGAGGATCCTTGATAAAAGAGTGAATGTTTTGGTGAAGTACCATCATTTTTCTTGTTCATCTCATCCCTCAGTTCTGTAACGGTGGCGGTCAGTTCTCTGATGTTTCCTTTCTGCTCTGTAACGGTGGCGGTCAGTTCTCTGTTCTTTTCTTTCTGCTCTGTAACGGTGGCGGTCAGTTCTCTGATTGCTGCATGGATGTCAGGGATGCCCAGATTGCAGTATTGTTGGCTGTCCGTTGAAGCTTCAGCTCTCAAAGTGTCTGTTTGAGGTGGATTCTGTCTTCCGTCCTCAGAGCTGATCTGTTGACTGATCTCATTCTCATCGAGTCCTCCATCTACCTGCTGCTGGACGACAAACACAAAGGTTTCCAACAGCAGCAGTATACATACTAAAGCCTTCATTCTTCACTGATGTTTGTTTCCAGCTCTTGCTCTGTCATCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596652 False 1378 lncRNA 0.39 3 263008 264764
TU596653 True 1512 lncRNA 0.38 3 263008 264764

Neighbor

gene id symbol gene type direction distance location
CI01000364_00110528_00118790 NA coding downstream 144218 110429 ~ 118790 (-)
CI01000364_00081223_00107594 NA coding downstream 155215 81180 ~ 107793 (-)
CI01000364_00037534_00041491 NA coding downstream 219289 36674 ~ 43719 (-)
CI01000364_00002233_00008090 NA coding downstream 254800 2233 ~ 8208 (-)
CI01000364_00373309_00374559 NA coding upstream 108545 373309 ~ 374559 (-)
CI01000364_00391142_00398789 NA coding upstream 126187 390951 ~ 398930 (-)
CI01000364_00455879_00458332 NA coding upstream 191115 455879 ~ 458332 (-)
G520159 NA non-coding downstream 37649 224308 ~ 225359 (-)
G520098 NA non-coding downstream 41455 138455 ~ 221553 (-)
G520105 NA non-coding downstream 60686 190609 ~ 202322 (-)
G520146 NA non-coding downstream 65760 180328 ~ 197248 (-)
G520143 NA non-coding downstream 112339 148351 ~ 150669 (-)
G520221 NA non-coding upstream 159959 424723 ~ 425045 (-)
G520238 NA non-coding upstream 176639 441403 ~ 441651 (-)
G520248 NA non-coding upstream 186433 451033 ~ 451562 (-)
G520259 NA non-coding upstream 198222 462986 ~ 463228 (-)
G520263 NA non-coding upstream 203956 468720 ~ 468944 (-)

Expression


Co-expression Network