G520258


Basic Information

Item Value
gene id G520258
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000364
NCBI id null
chromosome length 520240
location 462572 ~ 463344 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU596856
GAAAAGAATCGGGACAGGACTCAGGCAGAAATCATGTTCATGGATGAGATTATTAACGTTACTGTAAGCAGAGCATGGCCGAGTGCTGTGGGAGCAGTAACGAGGCCGCTGGAGCGATTGCTAATGAGAGACGAGCGTGACACACGTCTCAACAGCAGCGGATTTTTTATTATGCCACAGTCGCTGCTTCCGATCCTCCTGGTCATGTGCACGTAGGGTAAAGCAGCAGCACTGTTTATCATATTAGATACATTTGTGTGTTGAAAGTTGTTATAGTGCTACTCTGTGCTTTCGCTCAGTGGCTGCTATGAGACACTTGTTGCACACTGCAGTAAGATAGATCGATATTAGTTATGGTAACACATAGTACTCACTGTAAATCCAGAAAACAAGATTCAAACAAAAAGACTTAGGGCCAGATTTACTAACAGCTTGTGCCAGTTCAAACCCTCTTTTGGCGTTAAAAAACTACTGTCGGGATTTACTAAAGACACGCAGTATAAAATTAGCGCTGAAAAGGCGTGGACTGAGTTGTTTTTGCGGCTGACCTTATTGCATATGCATTTGTAGGAGTTTCCCTTTCAGATGCAAAATTTATGGGAGGAGAGTATTTAGATGAATCACGCAATGCGATTTACTAATATTTGTGCTCGTCAATTTCCTGGTATTTACGCCATTATTTAACGCCCTAAAAAAGCATGTCTTAACCCATTTTGTAACATGGCTGCAATTGTTGCTGTTAGGAGGAGACACCGCAGAAAACAGAGAGCGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596856 True 773 lncRNA 0.43 1 462572 463344

Neighbor

gene id symbol gene type direction distance location
CI01000364_00458726_00460323 NA coding upstream 943 458726 ~ 461629 (+)
CI01000364_00400175_00427556 NA coding upstream 34996 399374 ~ 427576 (+)
CI01000364_00382475_00385399 NA coding upstream 76455 382475 ~ 386117 (+)
CI01000364_00294611_00295771 NA coding upstream 166622 294401 ~ 295950 (+)
CI01000364_00287825_00289294 NA coding upstream 171500 287047 ~ 291072 (+)
CI01000364_00471523_00472629 NA coding downstream 8179 471523 ~ 472821 (+)
CI01000364_00512592_00513897 NA coding downstream 48487 511831 ~ 514181 (+)
G520257 NA non-coding upstream 347 462019 ~ 462225 (+)
G520252 NA non-coding upstream 5511 456784 ~ 457061 (+)
G520244 NA non-coding upstream 15795 446461 ~ 446777 (+)
G520222 NA non-coding upstream 36864 425438 ~ 425708 (+)
G520260 NA non-coding downstream 401 463745 ~ 464082 (+)
G520013 NA other upstream 125465 309368 ~ 337107 (+)
G520009 NA other upstream 138341 241321 ~ 324231 (+)
G520012 NA other upstream 207566 250300 ~ 255006 (+)
CI01000364_00151094_00203772 NA other upstream 277529 150818 ~ 203857 (+)
G520007 NA other upstream 416726 44426 ~ 45846 (+)

Expression


Co-expression Network