XLOC_014012 (igf2bp3)


Basic Information

Item Value
gene id XLOC_014012
gene name igf2bp3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 20201254 ~ 20247336 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027973
GATGTTATTAAGAGGCGGCGCCTACACTAACGTGTGTGACAATTTAGTCGCATCGCCAAAGAGTAAAGAAACTTTCTCTATTTCCTCCCAGCCCTTGCCTCGCAGAGGTGACGGAATAAATTATTCAGCTCGCTCGAATCAAAAGAAAACGCGAGTGCGCGCAACCACGGCGGCGATCTCGTCCATCAAATATCTCAGTAGCTTTGAGTGATTGGGAGAACACTCCCAGACCCTCCGCTGAGCGACAGTGCGGTGCTCTCTACAAACACTGCCCATCCGAGCGACGCGATAAAGGGCTGCCTCTCTGCAACACGGTCGCTCATTTTCGTATACAACAAAATGAATAAGCTGTACATCGGGAACGTGAGCGAGCAGGCGAGCGCGCTGGACTTGGAAAGTATCTTTGAGCAGTGGAAGATACCTTTCAGTGCTCCCTTCCTCGTAAAAAGTGGCTACGCGTTTGTGGATTGCCCCGACGAGAAGGTAGCGATGAGGGCCATTGACACGCTTTCAGgAAAAGTAGAACTCCACGGAAAAGTCTTAGAAGTGGAGCACTCTGTCCCTAAGCGACAAAGGAGCTGTAAGCTGCAGATCAGGAATATCCCACCTCACATGCAGTGGGAAGTTTTAGACGGGTTGTTAGCACAGTATGGCACAGTGGAAAGCTGTGAACAAGTCAACACTGACACCGAGACAGCAGTCGTCAATGTGCGATATGGTGCCAAGGACCAAGCCAGAGAAGCAATGGACAAATTAAATGGCTTCCTTATGGAGAACTACGCACTAAAGGTTTCCTATATCCCAGATGAGACTGCTGCAGCTGATGCCCCTGCTGTGGGTGGCAGGAGAGGCTTTAACCCACGTGGGCCACCTCGCCAAGGCTCTCCCAGTCTGGGCGCTAGACCTAAACTACAGTCAGACGTGCCTCTACGCTTGCTGGTACCCACCCAGTTTGTAGGAGCTATTATTGGCAAGGAAGGTGCTACCATCCGCAACATCACCAAGCAGACCCACTCAAAGATTGACATTCATCGTAAGGAGAACGCAGGAGCAGCAGAGAAGCCAATCACTGTTCACTCAACACCAGAGGGCTGCAGTTCTGCCTGTCGAAACATCATGGAGATCATGCAGAAAGAGGCAATCGACACAAAGATCACTGAAGAAATTCCCCTTAAAATTTTGGCTCATAACAATTTCGTTGGCCGCCTCATTGGAAAAGAGGGACGCAACTTGAAGAAAATCGAACAAGATACTGACACCAAGATCACAATCTCACCTCTGCAGGATCTGACCTTGTATAACCCAGAGCGCACCATTACTGTTAAAGGAACGTTAGATGCTTGTGCAAAAGCTGAAGAAGAAATCATGAAGAAAGTCCGCGAGTCCTATGAGAACGATGTAGCTGCCATGCACCTTCAATCTAACCTGATTCCAGGGCTCAATCTGAATGCATTGGGTTTATTTCCTGGTGCAGCGAGTGGAGGGATTTCACCCTCTGTGGTATCAGGACCACCGCCTGGGGCTCAAGCTGGATATCAATCATTTGGGGCGCAGATGGAGTCGGAAACTGTGCACCTCTTCATTCCTGCACTGGCAGTTGGTGCTATTATCGGCAAGCAGGGCCAACACATTAAACAGCTGAGCCGCTTCGCTGGTGCGTCAATCAAAattGCGCCTGCTGATGGAATTGATGCCAAGCAAAGAATGGTTATTATTTCTGGACCACCAGAGGCACAGTTTAAGGCTCAGGGACGTATCTTTGGAAAGTTAAAAGAGGAGAACTTCTTCGGACCGAAAGAGGAGGTTAAATTAGAGGCTCATATAAAAGTGCCATCATTCGCTGCTGGCAGAGTCATTGGTAAAGGAGGCAAAACGGTGAACGAACTACAGAACTTGACCAGTGCGGAGGTGGTCGTCCCACGGGACCAGACACCTGATGAAAATGACCAAGTAGTAGTAAAAATCACAGGCCACTTCTATGCAAGCCAGCTGGCCCAGAGGAAGATCCAGGAGATTATCTCTCAGGTGAGGCGGCAACAGCAGCCCAAGCCCTCAGCTGCAGGTCCACCAGTCGCCAGGAGGAAATAGAGCCACTGCGTCTTCTCGGAAACTAACAGGACACTGGACGCGTCCATCTCAGGGGTCAGGGAATGTCCTTACAACCCTGCCCACTCTTACACCCATTCCTCTTGAAGTTTCAGTGAGAATTGTGTACACCTGCACTTCCCCCTTCCCCACAGAATTTCAATCAAACCGTAAAAAGCTCAGCCACCCAGTCCCTGCCTTAATACAGTAACTGCACAGTCCTTAATTGACAGATGTTTGTTTTTGAGTTCATTGGGAAATGCCAAATTGAGGGTAAAAGGCGTTCAGGGCCTGTTTTTGGGGTATGGAATGGGTGACACAGAGTGGGGTTTAAGGTCTTTGGCTTGAGATGGAAAGAGGATTGTTGATGGAAGCATGCTGTCCTGGGATCCGTGGTGGCATTTTATAAATTCTGATGCATTTTATAGAATAAtaggtaaatatatatacatatataaaattatgAAAGAAGGTGGAGCGACACTGCCACTTATGACTGAGGGAAGTGTTGATTGGTGTTGGCCAGGAAACCAAGTTAATATGCATTTTACTGATCTACCTCAGGCTAGAGTacctcagaaaaaaagaaaatgatatatgaaaaaaatgttctgtttttttattttgctttgtggtATTTTGTATACTTTATAAAGCTAATAGttcttgaacatttttatttttttaagaaaatgtaaaatttattctGTAGTTAACGTTCGAATCCCCCAACTTTTGCCGTTTGCGTGCTCGCAATGAATAATTGTATGAGTTAGCGCACGTCGAAGCGGTTAAAGAGCAGAGTTTGGGCTTCTATGTTTTCTACAGATaggagaaagaaaagaaaagcgcCTCAGTGTCGCTGAGGAGCCACCACCCTCTGAACACCGTCAAGGTAATGAGAAATAACGTCAACCGTACATACCGCAGCAATGTCGTGCTAACATGCTAATAACTGTCTCGGCGGTAGCATACGATTCTTCACCCGCATTTCATTACACTGCAGTTAGGGTTGGATGCATGCAATAGAGGTCAGGGATGACCAAGATCCTGCTGTAACCTCTTTGACACCCCCCTCATCCTCAGCGCGCCTACTTCTCTATCAaatttaaaatagattaaaaataataacggCCTGCCCGATTGAGGTTGTTTTTTCTTTTCCCGtgctcatctttttttttttttttttttttccctccaagTAACGTGCGCCGTTTGTTCTcgacagactttttttttttttttttttttcatcaaactgggctttaCTTGCCGaagatttttcagtgtttaatgTCAGTCAATGCATGTCTGGGTCGGGGAGTTTCGCTGTTCTGATGCTTTTGCGTTGATAGCTATATAGGTTACAATAGTCGACGGCATGTCTTTAGGCTAACGAGCTGTAACATAGAAATGGACATGCAAATGGTTTAATTTAGAACTTTTCATTTGTCATTCAAAgtgaaaaaagcaaaaaaatatatataaaatgaacatTAGCAAGTTAAAAACGTTTAGTAAAAAAAGAAACCGATATTCCTTTTGTTTTCATGCAGAATGTAAATATGATTTGATTGTGGTAAAGAGTGCATCCATGCTTCCACACTAGTAAGACCGTTGTCTACCTCAGCTGAGGAAACGGTGGGTGTCGGGAATCCTTCCATCTCACCGAGACCTCCAGCGCGCGCAGCGATACCTCAAGTCCCTCGCGAACACTTCCGCACTGGGTATGCGCATGGCGCCGAGCGCTGACCAGAGGGGCACAAGTGatcgttttgtttttctttctacaCTTCTCTTACACCGTTTTTGATCTACCTCTTATTAGAAAAGTATTTAAATTAGAGGCATATTGCTATTTGTTAGAATTTGTAGGGTCATGTCCCATCTGCCTATTtcctcacagaaaaaaaaaatcattaaaaaaataataatgtatggCTAGACTTTAAAGATGAATGAGAAATTTGATTTTCACTTTTGCCTGCAATTTTTTGTCTCTCTGCTAACTGATTTGAACCTCACCTTATTGCTTTTTTCTGCTTCTGGTTTGGTGGTGTGGCTTCCTTGTATTGGGCTTTATTTCTCGCATAGGTATTGTATTCAAGGTCAAAGTGTTTAATTTGGAATCTGATTAATGACTGCTATAGAAAGTTTGTTTTCAAGGGCCTGCTTCATTTCTTGCTTATGAAATATGAACAATGAagtctttattttttacatttttcacgtCTTATGAATGCTACAGTTGTTTTCTCCAGAtttcttgttttgtttcgttttgacTGGGATCTGATCCAATTCATTTCATGGCTGTGTTGTGTGGTGAGTCATGTTTCAGTGGGAATGTGATGTGGAATTCCGGAAGCTGGAATGGTTCCCGGGGGGGGAAAAAAGTGGTCAGCATGAAAAGCAGCATCCCCTTCGACCGTGCTTGTGCGCCCTCACACACCTTCACTTGTCAAATGCCTCTgatacaaagaaaataattaaaagtcaagTTGGCTCCTA
>TCONS_00027974
CGCTGAGCGACAGTGCGGTGCTCTCTACAAACACTGCCCATCCGAGCGACGCGATAAAGGGCTGCCTCTCTGCAACACGGTCGCTCATTTTCGTATACAACAAAATGAATAAGCTGTACATCGGGAACGTGAGCGAGCAGGCGAGCGCGCTGGACTTGGAAAGTATCTTTGAGCAGTGGAAGATACCTTTCAGTGCTCCCTTCCTCGTAAAAAGTGGCTACGCGTTTGTGGATTGCCCCGACGAGAAGGTAGCGATGAGGGCCATTGACACGCTTTCAGGAGCTGTAAGCTGCAGATCAGGAATATCCCACCTCACATGCAGTGGGAAGTTTTAGACGGGTTGTTAGCACAGTATGGCACAGTGGAAAGCTGTGAACAAGTCAACACTGACACCGAGACAGCAGTCGTCAATGTGCGATATGGTGCCAAGGACCAAGCCAGAGAAGCAATGGACAAATTAAATGGCTTCCTTATGGAGAACTACGCACTAAAGGTTTCCTATATCCCAGATGAGACTGCTGCAGCTGATGCCCCTGCTGTGGGTGGCAGGAGAGGCTTTAACCCACGTGGGCCACCTCGCCAAGGCTCTCCCAGTCTGGGCGCTAGACCTAAACTACAGTCAGACGTGCCTCTACGCTTGCTGGTACCCACCCAGTTTGTAGGAGCTATTATTGGCAAGGAAGGTGCTACCATCCGCAACATCACCAAGCAGACCCACTCAAAGATTGACATTCATCGTAAGGAGAACGCAGGAGCAGCAGAGAAGCCAATCACTGTTCACTCAACACCAGAGGGCTGCAGTTCTGCCTGTCGAAACATCATGGAGATCATGCAGAAAGAGGCAATCGACAC
>TCONS_00027975
ATGAATAAGCTGTACATCGGGAACGTGAGCGAGCAGGCGAGCGCGCTGGACTTGGAAAGTATCTTTGAGCAGTGGAAGATACCTTTCAGTGCTCCCTTCCTCGTAAAAAGTGGCTACGCGTTTGTGGATTGCCCCGACGAGAAGGTAGCGATGAGGGCCATTGACACGCTTTCAGgAAAAGTAGAACTCCACGGAAAAGTCTTAGAAGTGGAGCACTCTGTCCCTAAGCGACAAAGGAGCTGTAAGCTGCAGATCAGGAATATCCCACCTCACATGCAGTGGGAAGTTTTAGACGGGTTGTTAGCACAGTATGGCACAGTGGAAAGCTGTGAACAAGTCAACACTGACACCGAGACAGCAGTCGTCAATGTGCGATATGGTGCCAAGGACCAAGCCAGAGAAGCAATGGACAAATTAAATGGCTTCCTTATGGAGAACTACGCACTAAAGGTTTCCTATATCCCAGATGAGACTGCTGCAGCTGATGCCCCTGCTGTGGGTGGCAGGAGAGGCTTTAACCCACGTGGGCCACCTCGCCAAGGCTCTCCCAGTCTGGGCGCTAGACCTAAACTACAGTCAGACGTGCCTCTACGCTTGCTGGTACCCACCCAGTTTGTAGGAGCTATTATTGGCAAGGAAGGTGCTACCATCCGCAACATCACCAAGCAGACCCACTCAAAGATTGACATTCATCGTAAGGAGAACGCAGGAGCAGCAGAGAAGCCAATCACTGTTCACTCAACACCAGAGGGCTGCAGTTCTGCCTGTCGAAACATCATGGAGATCATGCAGAAAGAGGCAATCGACACAAAGATCACTGAAGAAATTCCCCTTAAAATTTTGGCTCATAACAATTTCGTTGGCCGCCTCATTGGAAAAGAGGGACGCAACTTGAAGAAAATCGAACAAGATACTGACACCAAGATCACAATCTCACCTCTGCAGGATCTGACCTTGTATAACCCAGAGCGCACCATTACTGTTAAAGGAACGTTAGATGCTTGTGCAAAAGCTGAAGAAGAAATCATGAAGAAAGTCCGCGAGTCCTATGAGAACGATGTAGCTGCCATGCACCTTCAATCTAACCTGATTCCAGGGCTCAATCTGAATGCATTGGGTTTATTTCCTGGTGCAGCGAGTGGAGGGATTTCACCCTCTGTGGTATCAGGACCACCGCCTGGGGCTCAAGCTGGATATCAATCATTTGGGTGCAGCGGGTTTGAGGGTGAGGTGCCATTTTGGGCCTCCACGCTCTCCTCCAACAGCGGCTGCACAGCCTTTTCTGCGCAGATGGAGTCGGAAACTGTGCACCTCTTCATTCCTGCACTGGCAGTTGGTGCTATTATCGGCAAGCAGGGCCAACACATTAAACAGCTGAGCCGCTTCGCTGGTGCGTCAATCAAAattGCGCCTGCTGATGGAATTGATGCCAAGCAAAGAATGGTTATTATTTCTGGACCACCAGAGGCACAGTTTAAGGCTCAGGGACGTATCTTTGGAAAGTTAAAAGAGGAGAACTTCTTCGGACCGAAAGAGGAGGTTAAATTAGAGGCTCATATAAAAGTGCCATCATTCGCTGCTGGCAGAGTCATTGGTAAAGGAGGCAAAACGGTGAACGAACTACAGAACTTGACCAGTGCGGAGGTGGTCGTCCCACGGGACCAGACACCTGATGAAAATGACCAAGTAGTAGTAAAAATCACAGGCCACTTCTATGCAAGCCAGCTGGCCCAGAGGAAGATCCAGGAGATTATCTCTCAGGTGAGGCGGCAACAGCAGCCCAAGCCCTCAGCTGCAGGTCCACCAGTCGCCAGGAGGAAATAGAGCCACTGCGTCTTCTCGGAAACTAACAGGACACTGGACGCGTCCATCTCAGGGGTCAGGGAATGTCCTTACAACCCTGCCCACTCTTACACCCATTCCTCTTGAAGTTTCAGTGAGAATTGTGTACACCTGCACTTCCCCCTTCCCCACAGAATTTCAATCAAACCGTAAAAAGCTCAGCCACCCAGTCCCTGCCTTAATACAGTAACTGCACAGTCCTTAATTGACAGATGTTTGTTTTTGAGTTCATTGGGAAATGCCAAATTGAGGGTAAAAGGCGTTCAGGGCCTGTTTTTGGGGTATGGAATGGGTGACACAGAGTGGGGTTTAAGGTCTTTGGCTTGAGATGGAAAGAGGATTGTTGATGGAAGCATGCTGTCCTGGGATCCGTGGTGGCATTTTATAAATTCTGATGCATTTTATAGAATAAtaggtaaatatatatacatatataaaattatgAAAGAAGGTGGAGCGACACTGCCACTTATGACTGAGGGAAGTGTTGATTGGTGTTGGCCAGGAAACCAAGTTAATATGCATTTTACTGATCTACCTCAGGCTAGAGTacctcagaaaaaaagaaaatgatatatgaaaaaaatgttctgtttttttattttgctttgtggtATTTTGTATACTTTATAAAGCTAATAGttcttgaacatttttatttttttaagaaaatgtaaaatttattctGTAGTTAACGTTCGAATCCCCCAACTTTTGCCGTTTGCGTGCTCGCAATGAATAATTGTATGAGTTAGCGCACGTCGAAGCGGTTAAAGAGCAGAGTTTGGGCTTCTATGTTTTCTACAGATaggagaaagaaaagaaaagcgcCTCAGTGTCGCTGAGGAGCCACCACCCTCTGAACACCGTCAAGGTAATGAGAAATAACGTCAACCGTACATACCGCAGCAATGTCGTGCTAACATGCTAATAACTGTCTCGGCGGTAGCATACGATTCTTCACCCGCATTTCATTACACTGCAGTTAGGGTTGGATGCATGCAATAGAGGTCAGGGATGACCAAGATCCTGCTGTAACCTCTTTGACACCCCCCTCATCCTCAGCGCGCCTACTTCTCTATCAaatttaaaatagattaaaaataataacggCCTGCCCGATTGAGGTTGTTTTTTCTTTTCCCGtgctcatctttttttttttttttttttttccctccaagTAACGTGCGCCGTTTGTTCTcgacagactttttttttttttttttttttcatcaaactgggctttaCTTGCCGaagatttttcagtgtttaatgTCAGTCAATGCATGTCTGGGTCGGGGAGTTTCGCTGTTCTGATGCTTTTGCGTTGATAGCTATATAGGTTACAATAGTCGACGGCATGTCTTTAGGCTAACGAGCTGTAACATAGAAATGGACATGCAAATGGTTTAATTTAGAACTTTTCATTTGTCATTCAAAgtgaaaaaagcaaaaaaatatatataaaatgaacatTAGCAAGTTAAAAACGTTTAGTAAAAAAAGAAACCGATATTCCTTTTGTTTTCATGCAGAATGTAAATATGATTTGATTGTGGTAAAGAGTGCATCCATGCTTCCACACTAGTAAGACCGTTGTCTACCTCAGCTGAGGAAACGGTGGGTGTCGGGAATCCTTCCATCTCACCGAGACCTCCAGCGCGCGCAGCGATACCTCAAGTCCCTCGCGAACACTTCCGCACTGGGTATGCGCATGGCGCCGAGCGCTGACCAGAGGGGCACAAGTGatcgttttgtttttctttctacaCTTCTCTTACACCGTTTTTGATCTACCTCTTATTAGAAAAGTATTTAAATTAGAGGCATATTGCTATTTGTTAGAATTTGTAGGGTCATGTCCCATCTGCCTATTtcctcacagaaaaaaaaaatcattaaaaaaataataatgtatggCTAGACTTTAAAGATGAATGAGAAATTTGATTTTCACTTTTGCCTGCAATTTTTTGTCTCTCTGCTAACTGATTTGAACCTCACCTTATTGCTTTTTTCTGCTTCTGGTTTGGTGGTGTGGCTTCCTTGTATTGGGCTTTATTTCTCGCATAGGTATTGTATTCAAGGTCAAAGTGTTTAATTTGGAATCTGATTAATGACTGCTATAGAAAGTTTGTTTTCAAGGGCCTGCTTCATTTCTTGCTTATGAAATATGAACAATGAagtctttattttttacatttttcacgtCTTATGAATGCTACAGTTGTTTTCTCCAGAtttcttgttttgtttcgttttgacTGGGATCTGATCCAATTCATTTCATGGCTGTGTTGTGTGGTGAGTCATGTTTCAGTGGGAATGTGATGTGGAATTCCGGAAGCTGGAATGGTTCCCGGGGGGGGAAAAAAGTGGTCAGCATGAAAAGCAGCATCCCCTTCGACCGTGCTTGTGCGCCCTCACACACCTTCACTTGTCAAATGCCTCTgatacaaagaaaataattaaaagtcaagTTGGCTCCTAGCAATCATTGTTTGTGATTccttgctgtttttttgtttatttatttgtaggcTATTTTTCCATTGTGACTTGGGAAATAAGTTTTAACAAATGGTGATTAAAATGGTGCTGTTCTGAACTCTTCGTGGTGAACCACCCTATTGCACAGCTTTTAGTTCCTCCTTAAACTGTTAAATAAGCTAATAAAGATCTTCAGACTTTTTACAAATGTGTTTCCACCTTGTGTAAATGTAAACTGATCACTTGTGGTCAGCTGAGAtgcattaggttttttttttgttttgttttttttttctccatctgtGACCATATTGCCAGGTCCAGTTGATTAAACTATTCCCATTGTGGAGGGTGCTTTGTCAAAATTGCATTTCTGTTTGCTGTTTAAATTAAACTCTTAGATCAAaaaggagaaaaataaataaaggaaaactGTACATAAAGGTAGTTCATTTCAGCTAAAAAATACAACTGTAATTGAGATTTGTGAGACTATTTCTTATTAAAAGGGAAGTTCACTCAAAGATGAAATGTACTCTAAttactcgccctcaagtggtGTTAAAACACCACTATGTTCTATAAGTACAAAGAAAGATCGTTTGAAGAAAACCTCCAATAATTGACTTAAattatagaaaaaacaaatactatgtaagtcagtGGCTACATGTTTTTAATTCTCTTTAAAATGTCTTCCTttcgtgtttaacagaagaaagaaactaatttgGTAAAGTACACAGTCAGTAAATTGAccattttcatatttatgtgcAGTTTTCAAACATCACTCATTTCAGCCCTCTCTATAAAACTGTTTTTCGGGTTTTAACTGATTCAGGTGTAGTTTGTGAAATCTACAAAAATGTAAGTTTGTGAAAACTGTGTCAACGTGCACATATTTATTAACCCTTCAGTCTAGACGAACCAAGCAGTTTTGCTTAATCGAGACCTAAACACAGATAGCTTGGCTAAAACCAGGCTAAATTTGTGCTATTCTTGGACATCTTTTCATTAATAGCATGAATAAAGCCTTGTTTTAGCAAAAGCCTCTGTTTAGACATTTATTTGacttctttaaaacacaaaaaatgcttgctgggttatATGTGAATTTTTgtcaaccaaaacaacaacaacagtggaCTACTGGGCCATATAAGCACATATCCATAGTAATGACTGCACAAAACAGCACTTGACATTTAACATGTCAAGCCACATTCATCAGTTTTGAGTTTTGatttgaagatttttttcaacacatttctaaacataatagttttaataactgatctttaataactgatttactttatctttgcaatgatgaccgtaaattacattttactagatatttttcaagacacttctatacagcttaaagtgacattttaaggcttaactagttaTTTAGGTTAAcgaggcaagttagagtaattaggcaagttattgtataatgatggtttgttctgtagacagtcgagaaaaaatatagctttaaagggctaattattttgaccttaaaattgtgtttaaaaaatttaaaactgcttttattctagccgaaataaaacaaaaaagactttcttcacAAGAAAAAATtctatcagacatactatgaaaatgtcctttctaaagacataatttggaaaaaaatttaaacaagaaaaattcaaaggggggctaataattcttgctttaactgtatatgtgtgtgtgtatgtatgtatatgtatgtatgtatgtatatatatatatatatatatatatatatatatatatatatatattttttttttttttttttttatatatatatatatatatatatttt

Function

symbol description
igf2bp3 Enables mRNA 3'-UTR binding activity. Predicted to be involved in nervous system development; regulation of RNA metabolic process; and regulation of gene expression. Predicted to act upstream of or within mRNA transport and regulation of translation. Predicted to be active in cytosol and nucleus. Is expressed in oocyte stage I and oocyte stage V. Orthologous to human IGF2BP3 (insulin like growth factor 2 mRNA binding protein 3).

GO:

id name namespace
GO:0006417 regulation of translation biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:0010468 regulation of gene expression biological_process
GO:0051028 mRNA transport biological_process
GO:0007399 nervous system development biological_process
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003729 mRNA binding molecular_function
GO:0003730 mRNA 3'-UTR binding molecular_function

KEGG:

id description
ko03019 Messenger RNA biogenesis
ko03041 Spliceosome

ZFIN:

id description
ZDB-GENE-000308-1 Enables mRNA 3'-UTR binding activity. Predicted to be involved in nervous system development; regulation of RNA metabolic process; and regulation of gene expression. Predicted to act upstream of or within mRNA transport and regulation of translation. Predicted to be active in cytosol and nucleus. Is expressed in oocyte stage I and oocyte stage V. Orthologous to human IGF2BP3 (insulin like growth factor 2 mRNA binding protein 3).

Ensembl:

ensembl_id ENSDARG00000010266

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027973 False 4599 mRNA 0.44 15 20201254 20245496
TCONS_00027974 False 852 nonsense_mediated_decay 0.52 6 20201489 20226290
TCONS_00027975 True 6175 mRNA 0.40 16 20201593 20247336
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_014011 tra2a coding upstream 9876 20177208 ~ 20191378 (+)
XLOC_014010 ccdc126 coding upstream 24252 20163826 ~ 20177002 (+)
XLOC_014009 gsdmea coding upstream 146689 20037857 ~ 20054565 (+)
XLOC_014008 osbpl3a coding upstream 168207 19988869 ~ 20033047 (+)
XLOC_014007 cycsa coding upstream 216681 19984181 ~ 19984573 (+)
XLOC_014013 oxnad1 coding downstream 26928 20274264 ~ 20293884 (+)
XLOC_014014 NA coding downstream 61554 20308890 ~ 20309259 (+)
XLOC_014015 kcnh8 coding downstream 247913 20495249 ~ 20645531 (+)
XLOC_014016 NA coding downstream 418001 20665337 ~ 20668756 (+)
XLOC_014017 NA coding downstream 440273 20687609 ~ 20701153 (+)
XLOC_014004 CR382300.1 non-coding upstream 417630 19782413 ~ 19783624 (+)
XLOC_014003 mir196a-2 non-coding upstream 453560 19747619 ~ 19747694 (+)
XLOC_013994 CR626877.1 non-coding upstream 936373 19264759 ~ 19264881 (+)
XLOC_013989 NA non-coding upstream 1222975 18959908 ~ 18978279 (+)
XLOC_013987 FP074902.6 non-coding upstream 1317719 18881888 ~ 18883535 (+)
XLOC_014024 NA non-coding downstream 583501 20830837 ~ 21098279 (+)
XLOC_014026 NA non-coding downstream 1331933 21579269 ~ 21612272 (+)

Expression

Expression of XLOC_014012(igf2bp3) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Expression of XLOC_014012(igf2bp3) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000321_01491101_01521160 IGF2BP3 coding CI01000321 null 1490893 ~ 1521421 (+)
bowfin (Amia calva) AMCG00016686 LOC101072148 coding CM030122.1 CM030122.1 27484633 ~ 27496345 (+)