XLOC_014072


Basic Information

Item Value
gene id XLOC_014072
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 24758171 ~ 24760474 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029912
ATCTGAACATGACAGTAAAGTACAGAAAGCTTACAATATTTTGAACTGTTCCTGGACCTGTGTAGCTGTCTGCTCATCTAATAAGAATAGGATATGCAGTCAAGAGTTTTCAGCCATCTTCTGAGTATAGTCAGGAATGCAGTGTTAGCTGATCGATCCCCCAGCAAGGAACAAAGAAGCAACACAATGGCCCAGTGTGTTTGAAGCTGAAACACGAGGAAGGTTCAGGTTGACACATGGGTTTTGAATCAGACAACACAGACAGCCACACTGCAATAAGAACACACAGCACTGTGCCAAGACAGCTAAATTGGGACAACATACAACTGTGCCAAGAATCAGACATCAGAGTTGTGTCATGAAATCAAGCTCTTAAGCAGATGGAACAGCAAACTCCCCTGTGCTTACAGACTTTCACTTTCTTAGTCCTTATTTAATTGCTTTTTTCAGAAAATCCCAGGTCTGCTTAGCATATCAAAATCTAAAACTGATTAAATCAAC
>TCONS_00029913
CCTGGACCTGTGTAGCTGTCTGCTCATCTAATAAGAATAGGATATGCAGTCAAGAGTTTTCAGCCATCTTCTGAGTATAGTCAGGAATGCAGTGTTAGCTGATCGATCCCCCAGCAAGGAACAAAGAAGGTAAAAGTTCCGGAAGATGCTTTTTTGTCTTTTACATATAAATTAACTAATGGAGCTAAGTAATACAGGCATTAGAGCCAGAATTCGTGCTTATCAAACTCTGTATTGCCAGTAGAGGACAAGGAGAAATCTTTGCCTTCTGTCTCTGCACTCACCGACTGTCACTGTTTGTCCACTCATTCTACAAGTGGTTATGCAAATGTGCCCTTCATCTGTTTGTGTGACAGCAACACAATGGCCCAGTGTGTTTGAAGCTGAAACACGAGGAAGGTTCAGGTTGACACATGGGTTTTGAATCAGACAACACAGACAGCCACACTGCAATAAGAACACACAGCACTGTGCCAAGACAGCTAAATTGGGACAACATACAACTGTGCCAAGAATCAGACATCAGAGTTGTGTCATGAAATCAAGCTCTTAAGCAGATGGAACAGCAAACTCCCCTGTGCTTACAGACTTTCACTTTCTTAGTCCTTATTTAATTGCTTTTTTCAGAAAATCCCAGGTCTGCTTAGCATATCAAAATCTAAAACTGATTAAATCAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029912 False 501 lncRNA 0.41 4 24758171 24760474
TCONS_00029913 True 678 lncRNA 0.41 2 24758671 24760474

Neighbor

gene id symbol gene type direction distance location
XLOC_014071 NA coding upstream 88 24756852 ~ 24758083 (+)
XLOC_014070 NA coding upstream 153841 24600028 ~ 24604330 (+)
XLOC_014069 si:dkeyp-92c9.2 coding upstream 160894 24596324 ~ 24597277 (+)
XLOC_014068 si:dkeyp-92c9.4 coding upstream 168928 24575077 ~ 24589243 (+)
XLOC_014067 BX530091.1 coding upstream 184974 24569365 ~ 24573197 (+)
XLOC_014073 NA coding downstream 42068 24802542 ~ 24802792 (+)
XLOC_014074 si:ch211-195b13.1 coding downstream 111685 24872159 ~ 24889227 (+)
XLOC_014075 eya3 coding downstream 131273 24891747 ~ 24917208 (+)
XLOC_014076 NA coding downstream 162057 24922531 ~ 24935295 (+)
XLOC_014077 NA coding downstream 198755 24959229 ~ 24983508 (+)
XLOC_014065 NA non-coding upstream 308973 24448021 ~ 24449198 (+)
XLOC_014063 NA non-coding upstream 413513 24344005 ~ 24344658 (+)
XLOC_014078 NA non-coding downstream 243043 25003517 ~ 25060967 (+)
XLOC_014079 CR855860.2 non-coding downstream 390942 25151416 ~ 25152577 (+)

Expression


Co-expression Network