XLOC_014078



Basic Information


Item Value
gene id XLOC_014078
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 25003517 ~ 25060967 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00029915
CCTGTAAAAATCTCAAACTCTCCTCTTTGTAGAGTTAAAGTCATCATGAGTATTAGCTGCGGAGCACTTTCAGAAAACGCCTCAAATAGACGAAGCATCTGAAGATCATGGCTCAAGTACACAGTTACACCCTCGGTGAAAGTATTAGTCTGACGAATAAAATGCGTCGTCGAGATCTCCATCAGCCCAGTATACCTGAGGTAAACACCAAGCTGCAGAAAGTGGAATGGTttgatcaatttttttttctttgcaaattTCTCCACCTTAGTTTCAAGCTCATCCAAAGAGTCAGAGTACCAGACCCAACTGAATATCTGTAATAGCACTGAGGAGCCCAGTAGAAAAAAGATCATCAGCCCCATAGACACATAATTCTCCTCCTGATAAAGTGACACAACAGTCAAGATGTCCATTACTACATCCAGCAGGAAAAATAACAACCCCACCCAAGAAAACAGATATTCCCATAAAGAGTAATGAAAAGGAAAGCTCTCCTCCATGGTGCAGTCCAGTGCATGAAACCTTATAGTGACAGCTAACACACGCTTTCCATTTTTATACACTTGAACAGAGTTGAAACAGAAAGTAAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00029915 True 593 lncRNA 0.41 2 25003517 25060967

Neighbor


gene id symbol gene type direction distance location
XLOC_014077 NA coding upstream 20009 24959229 ~ 24983508 (+)
XLOC_014076 NA coding upstream 68222 24922531 ~ 24935295 (+)
XLOC_014075 eya3 coding upstream 86309 24891747 ~ 24917208 (+)
XLOC_014074 si:ch211-195b13.1 coding upstream 114290 24872159 ~ 24889227 (+)
XLOC_014073 NA coding upstream 200725 24802542 ~ 24802792 (+)
XLOC_014079 CR855860.2 coding downstream 90449 25151416 ~ 25152577 (+)
XLOC_014080 si:ch211-239d6.2 coding downstream 93099 25154066 ~ 25155258 (+)
XLOC_014081 CR855860.3 coding downstream 114305 25175272 ~ 25175392 (+)
XLOC_014082 rpa3 coding downstream 404058 25465025 ~ 25467185 (+)
XLOC_014083 col28a1a coding downstream 415261 25476228 ~ 25512695 (+)
XLOC_014072 NA non-coding upstream 243043 24758171 ~ 24760474 (+)
XLOC_014071 NA non-coding upstream 245434 24756852 ~ 24758083 (+)
XLOC_014087 BX842609.1 non-coding downstream 1131855 26192822 ~ 26192936 (+)
XLOC_014090 FP017254.1 non-coding downstream 1515627 26576594 ~ 26576708 (+)
XLOC_014093 FP085398.3 non-coding downstream 1744799 26805766 ~ 26805882 (+)

Expression



Co-expression Network