XLOC_014094 (FP085398.1)


Basic Information

Item Value
gene id XLOC_014094
gene name FP085398.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 26828502 ~ 26844582 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028085
ATTGGCTGCAGTCAGCTGTGAATGCTGTCGTTTTGCTAGCAGACAGTGAACTGTGCCGAAATCATCAACTGAAACAAGCTGGGCCCGAACCACAGCAGGCTCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACAGAGAGGAAAAATCTGATGGCAAATCCCCCACAGGACAGTCACGCACAGCAGGAGAACCAGGCACATCATCCACATGGAGGAACGGTACATATCACTCCAATTCATCCAGTGTTCATAAAAAACAGCTAAACCAAATCATCAAAGAGTACAAATGTGACTGCAGCATGATTTTTACCACCCTGCTTTATTGGCCTCAACTAAACAATAGCACTGAAATGCTTGCAATGCTCTAATGACACTTTCATAACACGTAGATGTTTCTGAAATGCCACAGGAATTAGAAATATGCCTTTCTTTTATATGTATAACTTTCATTTTCATAATTAATAGGGCGTTTAAATCCTGCCTAAattgttttattgcattaaaGCTCACCTGGTGTGTTTTTTTGTCAGGTCAGTGTGTGGCATCAGTCCCCACGTCCTCCTGGTTCACTCCTAAATTTGACTTCTCACGCTGCAGGACTCTTCTGGAAACAAAAGGCTTCCAGATCCCAGCAGATAATTTTGAGGGTCCACTTGAATTAGCGCTGGACCATCCGTCCGTCAGAAGATATCTGCTTTTCAACTCATATGTTTTTAATTTCATCATGGCACCGATTTTGTACATGGTGCTGTGGTGCGCTGTGTATTCAACCCTTCACATGTACCTTCAAAGCAGCACAGCAAGCTTCTGGGTGCTCTGTCTGTGTGTCAGCCTGGTGTCCATCATCCTCACTGCTGTCATCAGCCTCATCTTCCACTACAGCAATAGAGAGATCAACATGAACACAGATGTGCGCTTGGTGGGGGTTAATGAGCGCATGATCAGACACGGGCTGTTGTTAGGAGTGGCTGACTGGGTGCATAAATGCAGAGGAAAACTGCAGCTCTTCTGTGTATACTGGGACTTGTCCCCATGTCTGAGGTCTCTGACTGAATCCCTAGACAACATGAGTTTTTTCAGTGATCAAGTACAGAACAAACTCAAGAAAAGAATGTCGCACCTAGTTTTAGTGACCGAGGTTACGACTCTGGATCCCGAGGCTGGATTACAGGACGAGGGGTTTCCAGAGGAGGAGCAACCCCTGCTGGTGGCGGGACGAGAGCGAAGCGAATCCATCAGTCAACGGGATGACTCCAAACTCACAAAAAACTTCAGCCTGATGCCCAACACCAGGCTTTCTAATCAGGTTATTGCTCAGCAGCTCCTGATGGCCTACAGTGCACTTTATGTTCGACTATTGGTATCAAACAAGCTAACTGTTCCATCCCATCGGCCTTCAGGTGCAGGGAAAAATCACTGTGGTCCCAGTGTTTGTCTGTGCGAGTATGTGGAGCTCAAGGCCCTGCAGTAG
>TCONS_00028084
ATTGGCTGCAGTCAGCTGTGAATGCTGTCGTTTTGCTAGCAGGTTTGTTGAAATGGCTTTAAATGCATGTTGATTGGTGTTCTCTGGGTCATGATGGTCAAACATTAACAGCTTTCTGAAGTGATGTAATGTATGCAAAGGTTCATGCGGATTGATGTATAAAAACACTGCTTGCAATAACTGTGAAACACATTCAGATTGGCATGCAGATTACTGTAATTCAGAGAGACTGCtgcccattttctttatctttgaGATATAGCATAACGTCTTCCTTATACGGTCTCATGTGAAACTGTTAAAAGAGAAGTTGACTGCAAGATTGTTGTTTCCTGTTCTTAAACAGACAGTGAACTGTGCCGAAATCATCAACTGAAACAAGCTGGGCCCGAACCACAGCAGGCTCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACAGAGAGGAAAAATCTGATGGCAAATCCCCCACAGGACAGTCACGCACAGCAGGAGAACCAGGCACATCATCCACATGGAGGAACGGTACATATCACTCCAATTCATCCAGTGTTCATAAAAAACAGCTAAACCAAATCATCAAAGAGTACAAATGTGACTGCAGCATGATTTTTACCACCCTGCTTTATTGGCCTCAACTAAACAATAGCACTGAAATGCTTGCAATGCTCTAATGACACTTTCATAACACGTAGATGTTTCTGAAATGCCACAGGAATTAGAAATATGCCTTTCTTTTATATGTATAACTTTCATTTTCATAATTAATAGGGCGTTTAAATCCTGCCTAAattgttttattgcattaaaGCTCACCTGGTGTGTTTTTTTGTCAGGTCAGTGTGTGGCATCAGTCCCCACGTCCTCCTGGTTCACTCCTAAATTTGACTTCTCACGCTGCAGGACTCTTCTGGAAACAAAAGGCTTCCAGATCCCAGCAGATAATTTTGAGGGTCCACTTGAATTAGCGCTGGACCATCCGTCCGTCAGAAGATATCTGCTTTTCAACTCATATGTTTTTAATTTCATCATGGCACCGATTTTGTACATGGTGCTGTGGTGCGCTGTGTATTCAACCCTTCACATGTACCTTCAAAGCAGCACAGCAAGCTTCTGGGTGCTCTGTCTGTGTGTCAGCCTGGTGTCCATCATCCTCACTGCTGTCATCAGCCTCATCTTCCACTACAGCAATAGAGAGATCAACATGAACACAGATGTGCGCTTGGTGGGGGTTAATGAGCGCATGATCAGACACGGGCTGTTGTTAGGAGTGGCTGACTGGGTGCATAAATGCAGAGGAAAACTGCAGCTCTTCTGTGTATACTGGGACTTGTCCCCATGTCTGAGGTCTCTGACTGAATCCCTAGACAACATGAGTTTTTTCAGTGATCAAGTACAGAACAAACTCAAGAAAAGAATGTCGCACCTAGTTTTAGTGACCGAGGTTACGACTCTGGATCCCGAGGCTGGATTACAGGACGAGGGGTTTCCAGAGGAGGAGCAACCCCTGCTGGTGGCGGGACGAGAGCGAAGCGAATCCATCAGTCAACGGGATGACTCCAAACTCACAAAAAACTTCAGCCTGATGCCCAACACCAGGCTTTCTAATCAGGTTATTGCTCAGCAGCTCCTGATGGCCTACAGTGCACTTTATGTTCGACTATTGGTATCAAACAAGCTAACTGTTCCATCCCATCGGCCTTCAGGTGCAGGGAAAAATCACTGTGGTCCCAGTGTTTGTCTGTGCGAGTATGTGGAGCTCAAGGCCCTGCAGTAG
>TCONS_00028083
ATTGGCTGCAGTCAGCTGTGAATGCTGTCGTTTTGCTAGCAGGTTTGTTGAAATGGCTTTAAATGCATGTTGATTGGTGTTCTCTGGGTCATGATGGTCAAACATTAACAGCTTTCTGAAGTGATGTAATGTATGCAAAGGTTCATGCGGATTGATGTATAAAAACACTGCTTGCAATAACTGTGAAACACATTCAGATTGGCATGCAGATTACTGTAATTCAGAGAGACTGCtgcccattttctttatctttgaGATATAGCATAACGTCTTCCTTATACGGTCTCATGTGAAACTGTTAAAAGAGAAGTTGACTGCAAGATTGTTGTTTCCTGTTCTTAAACAGACAGTGAACTGTGCCGAAATCATCAACTGAAACAAGCTGGGCCCGAACCACAGCAGGCTCTGACAGTGGCCGTCACCATGGAGGAGAGGGAGCGGCAGTGTAACAGAGAGGAAAAATCTGATGGCAAATCCCCCACAGGACAGTCACGCACAGCAGGAGAACCAGGCACATCATCCACATGGAGGAACGGTCAGTGTGTGGCATCAGTCCCCACGTCCTCCTGGTTCACTCCTAAATTTGACTTCTCACGCTGCAGGACTCTTCTGGAAACAAAAGGCTTCCAGATCCCAGCAGATAATTTTGAGGGTCCACTTGAATTAGCGCTGGACCATCCGTCCGTCAGAAGATATCTGCTTTTCAACTCATATGTTTTTAATTTCATCATGGCACCGATTTTGTACATGGTGCTGTGGTGCGCTGTGTATTCAACCCTTCACATGTACCTTCAAAGCAGCACAGCAAGCTTCTGGGTGCTCTGTCTGTGTGTCAGCCTGGTGTCCATCATCCTCACTGCTGTCATCAGCCTCATCTTCCACTACAGCAATAGAGAGATCAACATGAACACAGATGTGCGCTTGGTGGGGGTTAATGAGCGCATGATCAGACACGGGCTGTTGTTAGGAGTGGCTGACTGGGTGCATAAATGCAGAGGAAAACTGCAGCTCTTCTGTGTATACTGGGACTTGTCCCCATGTCTGAGGTCTCTGACTGAATCCCTAGACAACATGAGTTTTTTCAGTGATCAAGTACAGAACAAACTCAAGAAAAGAATGTCGCACCTAGTTTTAGTGACCGAGGTTACGACTCTGGATCCCGAGGCTGGATTACAGGACGAGGGGTTTCCAGAGGAGGAGCAACCCCTGCTGGTGGCGGGACGAGAGCGAAGCGAATCCATCAGTCAACGGGATGACTCCAAACTCACAAAAAACTTCAGCCTGATGCCCAACACCAGGCTTTCTAATCAGGTGACAACAAAAATATTCATATCAACAAAATACACATTTGTCAATTGCACCACAATTCTTACAAATGGTGATTTAAAGAGACTTCTACATGATGAATCATCACCAACTATTAATGTTGAATTAATCAAAGTTAGAACGTCTAACAGTTCTTTTTTTCTTCAGGTTATTGCTCAGCAGCTCCTGATGGCCTACAGTGCACTTTATGTTCGACTATTGGTATCAAACAAGCTAACTGTTCCATCCCATCGGCCTTCAGGTGCAGGGAAAAATCACTGTGGTCCCAGTGTTTGTCTGTGCGAGTATGTGGAGCTCAAGGCCCTGCAGTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000087611

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028085 False 1483 mRNA 0.47 9 26828502 26844582
TCONS_00028084 False 1787 mRNA 0.45 8 26828502 26844582
TCONS_00028083 True 1638 mRNA 0.46 8 26828502 26844582

Neighbor

gene id symbol gene type direction distance location
XLOC_014093 FP085398.3 coding upstream 22620 26805766 ~ 26805882 (+)
XLOC_014092 si:dkey-27c15.3 coding upstream 98252 26681848 ~ 26730250 (+)
XLOC_014091 ints3 coding upstream 154647 26640096 ~ 26673855 (+)
XLOC_014089 npr1a coding upstream 199385 26423590 ~ 26629117 (+)
XLOC_014090 FP017254.1 coding upstream 251794 26576594 ~ 26576708 (+)
XLOC_014095 nelfe coding downstream 78198 26922780 ~ 26932829 (+)
XLOC_014096 tnfa coding downstream 174850 27019432 ~ 27024019 (+)
XLOC_014097 NA coding downstream 189291 27033873 ~ 27041528 (+)
XLOC_014098 ddx39b coding downstream 495266 27339848 ~ 27358545 (+)
XLOC_014099 ppp1r11 coding downstream 604043 27448625 ~ 27453644 (+)
XLOC_014087 BX842609.1 non-coding upstream 635566 26192822 ~ 26192936 (+)
XLOC_014081 CR855860.3 non-coding upstream 1653110 25175272 ~ 25175392 (+)
XLOC_014079 CR855860.2 non-coding upstream 1675925 25151416 ~ 25152577 (+)
XLOC_014104 NA non-coding downstream 1130083 27974665 ~ 27976483 (+)
XLOC_014106 BX511306.1 non-coding downstream 1298553 28143135 ~ 28143254 (+)
XLOC_014109 NA non-coding downstream 1944386 28788968 ~ 28824390 (+)
XLOC_014110 NA non-coding downstream 2261353 29105935 ~ 29107694 (+)

Expression


Co-expression Network