XLOC_014110


Basic Information

Item Value
gene id XLOC_014110
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 29105935 ~ 29107694 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029722
ccataattGAAACAGagtatcagagttgcagcaatgttttgtcagcttgtcatccacTGAAAAAACAGTTGGTGATTGCCTAGAAACATCATTTTAGATTCAACATCAGATTTCGTTTCATAATTTAAAACTGACCTCAATCCTGAGTCTAGATATTCAGCTTTCTATTTGAAATTCATAGTGTCCTGTGGAACACCACTGATGTAACAACATGATTACacagatattttttttccagACATCATAAAGTGTCTGAAAGAGCGTAAGTCAAGGAACATTTATGTTCACCTGACATTTGACCATTTTATGGATTGACTTACGGTTCAGCGAGCTTAAATTCTTAGCCTCAAGCAGACACAGGTAGAGAAGCAATTTAAGACAAAAAAATCACCATGCTTCAGTCATTCAACCAATCAGAGCTCTGCCAGAGGGTGTTAAGGCCTGTCACAACACATGAGTCCTCAGAAAACCTGTCATATGGCTGATGGGCTTTTATAAAAATTCCCTTTGaaatggtatatatatatgtcatttgTTTGAAGTTTAAGTTTCCATTTGTGAAGATGAGTCTGTATTGGATGTTGCCAAGCTCATCTCATCTATACTTAACACCCTTTCTGACCCTGGGCATGGTCTAAGAAGGTTGAATGGGCTTTTAGGTCAATGAGAATCTGTGAGGGGAAAACCTAAGATGACTGAACACAAACACGTTTGAAGTGAAGTGTCACTGGCAGCGACTCTCTCGGGCCCAACGGTGTGATTCGTTCCTTGATAAATATTTCAGTTCAACGACTTTCTTCACTTACGGTCAAATGTAAACACACTAATCCAACCTACGTCGACCAAAGAGCATCAGATGGGCTCTGCGCTCAACACGGACCACCTCAGGCGCTCGAAACATCCTTTGATTACACTTCCACACTTCTCCAGTCCATTCCACACCTCGGCACTGTTCCTAACCCCACAGGTGAGAGTTACCCGACTAAATGGGATTTCATTCAATGCCCCTTTTGGATGTTACCATGGAAACACCGACAATAACAGCATGCAGAGTTGCATGTGGCTTTGTATATGCTGGTTGTCGCCGAGGCATCATGGTAGAGAAAAACAGGAGGCTATTGTGCGCAGCCCTAGGGAGTGGCATTGACATTTGCTTTTGCAGGATGCACTCTCAGCTCTATTATAACAAGATCCATGGCAGAGTGCCTCAACACAATACCAGCCTCCTTCTATTGAAGACTTGTTGTCCAGGAGTGATTCATCACCAAAGCTGTGGGGACTCACTAGGCGCAAGGTGGACAAAGCTAAGCAGGACACGGCCATGGAAAAAAAAAGATGCATCATTACAGTCGGGGTCACTGCAGAGCGAAGCAGGGGGACTCCTTTTAACAGACAGACAGCCACTGCTCAGGAACACCACCTTCATCCACCTCAAACTGGAAGACCTCATCGCTGCCTGCTGCCCAGACTAACAAGCTACAGTGTGCTGGAATATAAACAGGAAAAGGAGAAAAATTCAGGCAAGGGAACAAAAGTGTCAAACTGGGACAGTATTGACTGAAACTCGGAAATCTAAAATCTATGTACTGTACAACTGCAAGTGGAAGGAGCGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029722 True 1613 lncRNA 0.43 2 29105935 29107694

Neighbor

gene id symbol gene type direction distance location
XLOC_014109 NA coding upstream 281545 28788968 ~ 28824390 (+)
XLOC_014108 lpcat1 coding upstream 771771 28291062 ~ 28334164 (+)
XLOC_014107 mrpl36 coding upstream 815722 28284120 ~ 28290213 (+)
XLOC_014105 irx4b coding upstream 843038 28114503 ~ 28262897 (+)
XLOC_014106 BX511306.1 coding upstream 962681 28143135 ~ 28143254 (+)
XLOC_014111 CU469458.1 coding downstream 95448 29203142 ~ 29203257 (+)
XLOC_014112 maco1a coding downstream 196153 29303847 ~ 29333867 (+)
XLOC_014113 ldlrap1a coding downstream 230095 29337789 ~ 29363779 (+)
XLOC_014114 NA coding downstream 351423 29459117 ~ 29607003 (+)
XLOC_014115 NA coding downstream 638444 29746138 ~ 29751743 (+)
XLOC_014104 NA non-coding upstream 1129452 27974665 ~ 27976483 (+)
XLOC_014097 NA non-coding upstream 2064407 27033873 ~ 27041528 (+)
XLOC_014093 FP085398.3 non-coding upstream 2300053 26805766 ~ 26805882 (+)
XLOC_014123 BX510301.1 non-coding downstream 1410761 30518455 ~ 30518573 (+)
XLOC_014124 BX510301.3 non-coding downstream 1480172 30587866 ~ 30589951 (+)

Expression


Co-expression Network