XLOC_014117 (hdac1)


Basic Information

Item Value
gene id XLOC_014117
gene name hdac1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 29808471 ~ 29821601 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028128
TTACAACTAACTgtcttaaataaattaaatattccgGTATATTATAGATCCAGTCCATGTTGGCGCACGTTTAAACAGCTGTGTAGTAAATGGATCTAGATCTAAATGCATAATTAAAGCAGAAGATAAATCATTGGCGGAGAAACAAAAGAATCACGCCTACAGTGATGGAACCTGTACCGTGATTGGCTCAAAGCTGCCCGAGACAAGTTGCTATTGAAGTTTCTCAGTGCGCAGAAAGCCCGGCAGGCGCAGGCTGTAATTGGAGGGTAAAATGGCGCTGAGTTCTCAAGGAACAAAGAAGAAAGTTTGCTATTATTATGACGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTATGGGCTGTATAGGAAAATGGAGATTTATCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATTTAACGTAGGGGAGGATTGTCCTGTCTTTGACGGCTTATTTGAGTTCTGTCAGCTCTCAACAGGTGGATCTGTTGCTGGTGCGGTGAAACTCAACAAACAGCAGACAGACATTGCCATTAACTGGGCAGGAGGTCTACATCATGCTAAGAAATCAGAGGCATCTGGATTCTGCTATGTCAACGACATTGTACTGGCCATTCTGGAGCTGCTCAAGTACCATCAAAGAGTGCTTTACATCGACATTGACATTCATCACGGTGATGGAGTTGAGGAAGCCTTTTACACAACAGACCGTGTCATGACTGTGTCTTTCCACAAGTATGGAGAGTATTTCCCGGGTACTGGAGACCTCAGAGATATTGGTGCAGGCAAGGGGAAGTATTACGCTGTAAATTACCCGCTCAGGGATGGTATTGATGATGAGTCCTATGAAGCCATATTCAAACCTATCATGTCCAAAGTGATGGAGATGTACCAGCCCAGTGCTGTGGTGCTCCAGTGCGGCGCTGACTCTCTGTCCGGAGATCGATTGGGCTGCTTTAACCTTACCATTAAAGGTCATGCCAAGTGTGTAGAGTACATGAAGAGCTTTAACCTGCCGCTGCTCATGCTGGGAGGTGGAGGCTACACCATTAGAAACGTGGCCCGCTGCTGGACTTTCGAGACAGCTGTAGCACTGGACAGCACCATTCCTAATGAGCTCCCGTACAATGATTACTTTGAGTATTTTGGACCTGACTTCAAGCTCCACATCAGCCCCTCCAACatgaccaatcagaacacaaatgaCTACCTGGAAAAGATCAAGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCTCCAGGCGTTCAGATGCAGGCCATCCCGGAGGATGCAGTTCAGGAAGACAGCGGAGATGAAGAGGACGACCCTGACAAACGCATCTCCATTCGTGCTCACGATAAGCGGATAGCCTGTGATGAAGAGTTCTCAGACTCTGAGGATGAAGGCCAGGGTGGACGGAGAAACGCAGCCAATTACAAGAAGCCAAAACGAGTGAAGACTGAAGAAGAGAAGGATGGAGAAGAGAAGAAAGGTGAGCCAACAGATGTTAAAGAAGAGGAGAAAGCTTCAGAAGAGAAAATGGACACAAAGGGGCCAAAAGAAGAATTAAAAACAGTGTGAGGTGGGGGAGAAGGACTGCCAGTCCTCCTGGATGCATGTACTTAAGTCGTCAAACACCCTCATCTTCAAACATCAAacccacatttacacacacacacatacacatacatgctAGATGTTAGCTCTAGTCCTGAGCTAAGGACTGTAAATTATTTTGTAAGACTCGTTTTACTATTTGTAATCTAATGAAGCGGTATaaaagtttttacatttacaagtGTGAAATGACCAGATGTTTTTTTGTTTCGTGCTTTGGAACCATGTTTGTTTGCCTCCCTTATGTTACTATTTAGCGACGATAGCACCTCAGACACAGGACCACAAATAGCACATAACTTTACTGTCCCATCATGGGatgcttttttttctcttccccCTCCCCctcaaataattttaaatcatGGATGGAGATACTTATTGGCCGCTCTTACTTGGGTTTTCTCTGCGGATGCTGTTTGGTGTCCGGTGTCCTTTACCTCGTTTTTAAGCGCTAAATGTTTGGTTTTTATTCTGGTGTCTGTCTCTCGATACCTACATCTGTGCGGTGTGTAAGTACTCCGGTATGGTCGGGGCATGGCGAAGGCTTGCTGTATTGCTGTTAGATTCAAGATTTTTCTTTCTGTTGTGCTTTATTCTAGCATGTCAGTCGTGCAGCTGACCAGACATTTAGCCGTTTGGATTTTCCAGAGTTCAGTGGTTGTGAAATGTCCTTATTATAACAATGATTTTGGTAAATAAAGAGAAGTTCTCTGATGTTTgtggacttttttatttttatttttattttttacttttacacaGACATTTCTTGTCTTCTGATAGAGGATTTACAATAAttttaatgcagtttatttaatcctgtctattttttaaaataaaattattaatcttAATTTCTTTATACCTAGACTAAATTAATTTAGCaaattaacatttgtttaaagaagAAAGTTTAGACTTAATTTTGTAACATTCTTGATACAATTACAAATATACATTGACTGGTCACTTTATaaggcactttattaggtatactgtCCCAACTGCTGCAATCCCATGGTAGAACTCAGTGTATGCAGACATAATCAAGACGGTCTGcagcagtttaaaccgagcatcagaatggggaagatgATTTAAAGTATCTTGGAACATGGCATGCTTGTTGGTGCTGGtctttatttcagaaactgcttatctactaggattttcatgcacaaccatctctagggtttacagagaatagtctgaaaggggaaatatccagtgagtggcacaAATGTgctgttgatgtcagaggagaatggccagactggtttgagctgataggaAGACAacggtaactcaaataaccacttgttacaatcgAAGTATACAATGAGCATCTCTGAACGTACAACACGTCTAACCTTGAGGCTGGTGGGGTAGAGCAGCAGAAgtccacaccgggtgccactccagtcagctcaagaacaggaaactgaggctacaattcacacagactcagcaaaattggacaatagaagattggaaaaatgttgcctggtctgagtctcgatttctgctgcgacattcagattgTAGGTACAAAATCTATttgcaggataacacgccatgtcattaAGCATCTTGAtgttagactggtttcttgaacatgacaatgagtttaagGTACTCAAATGGCCCCACAGTCAACAaagctcaattcaatagagcacctttggatgtggttgaacaggagattcgcatcatgaatgtgcagtcgacaaatctgcagcaactgtgtgatgttatcatgtcaatatgtagCAAAAtatctgaagaatatttccagtaccttgttgaatctatgccatgaaggattacagcagttctgaaggcaaaaggggttccaaccctgtattagtaaggtgtacctaataaagtgaatggtaagtatatattttaattggGACAATTTCtacactgtacaaaaaaataaCTTCACATATGTTATTAACCTACAGTGTAAATCTAGACATGCATGTGTGAATGTATAGGGGTGGTTTTGAATCTCTGGGATAAACATGTCAGTTTTCAAAAACGTTAATGTAAGCATTTTTAATCAAACCATAaagttatttctaaaaataatgtgtgtatttagtgagattttgtctaaaaaaatgttgaacttaAATACTGCCACTGTAGACTAgcttatttttgattgtctaagccaggggtgcctaaacttggtcttggagggccggtgtcctgcaaagtttagttccaactccaatcagacacacctgggctagctaatcaagctcttactgggctttctagaaacatccgtttAGGtgtgaggcaagttggagctaatccgcaggacactggccctccaggaccgagtttagacacccctggtctaagctTTCTCAATCACACATTCAGCATCGATTATCATGAGTCTAACTTATTTTGAATCTCTATTTTCTTTCCTTTtagtttaatgtaaaataaacatttgtatgaAATATCGGTTTTGGgcattatttgtaattttagaaATCTTCACCAgcaacacataaatatatattttaattttaacactGATATCAAAGTGTGTGTATCCTCGAGTCACATTAAAGGATAATTTATTAAAGCCTAAAAggcattaaatataaaaatgaaattgtATAACATGTAGACAATTTCGACtatgttgttttacatttgattatagacaatttcattatttaaatactgttagactcttcAGATAAAACATCAAGCagcttttatatttattctaaagtatttttttttttgcttgtaaattatatatattttttcaattgcaCAGGATACAAAAAGATTAGATCATCCGTGTCTGTCTAATTGATTAAATCTTTCCAACTATTCAAATCTGGTAAAATTATATTGATATCACAATATATAATCGCATCATATATAGTGCAGCCCAGTTGAGATGTTCATTTTGTATCACTTTGAATTTTTGATTAACGTGATTTAGTTTCAATTCAACCTTTAATATACAGGTCAAATCACATCCAATCATCAtgcataatgtaaaaaaaaattgttagacAATCTGAACTGTAGCTACTCGATTCTTTTCCAGGATAGATCTTAAAATCCCTTTCATTTAAAGgagcagtaggtgatcttccacaatacTAACAGCTTAgtataaatctctgaatcacagtccctcccctgccgtccagagCCATGCCTCCTGAAACGAGAGCACACGCACCTTTAAGATGACagcagaaccctctctcatgtgagcgattagtgcttgtccggcggtgTGCAGAAATTACACCCATTACTACTGaaatgctatttcagagcgaatatacagagtagcatggtaaacaatataaggagaGGGTCACAGGTagttattgttaaaaaattatattcacaTGTGACgtaaatataaaaccatcttcacctcaataaagcaggctaggtggaatagtgatatttacttgtgttttgttattaaataaaatctacattttcgatactgtaaaaggtcccttacgAAACTAAAAATAGCACATCAATCCTTCATCGGAACATTTTAGTGGCCAAAAAagattaaatagttttaaacagaacattatctgtctaaaagaaatccttcagccatggtgtcatcctttcaccagcatgcaaaggtaactcc
>TCONS_00028129
AGTGCGCAGAAAGCCCGGCAGGCGCAGGCTGTAATTGGAGGGTAAAATGGCGCTGAGTTCTCAAGGAACAAAGAAGAAAGTTTGCTATTATTATGACGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTATGGGCTGTATAGGAAAATGGAGATTTATCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATTTAACGTAGGGGAGGATTGTCCTGTCTTTGACGGCTTATTTGAGTTCTGTCAGCTCTCAACAGGTGGATCTGTTGCTGGTGCGGTGAAACTCAACAAACAGCAGACAGACATTGCCATTAACTGGGCAGGAGGTCTACATCATGCTAAGAAATCAGAGGCATCTGGATTCTGCTATGTCAACGACATTGTACTGGCCATTCTGGAGCTGCTCAAGTACCATCAAAGAGTGCTTTACATCGACATTGACATTCATCACGGTGATGGAGTTGAGGAAGCCTTTTACACAACAGACCGTGTCATGACTGTGTCTTTCCACAAGTATGGAGAGTATTTCCCGGGTACTGGAGACCTCAGAGATATTGGTGCAGGCAAGGGGAAGTATTACGCTGTAAATTACCCGCTCAGGGATGGTATTGATGATGAGTCCTATGAAGCCATATTCAAACCTATCATGTCCAAAGTGATGGAGATGTACCAGCCCAGTGCTGTGGTGCTCCAGTGCGGCGCTGACTCTCTGTCCGGAGATCGATTGGGCTGCTTTAACCTTACCATTAAAGGTCATGCCAAGTGTGTAGAGTACATGAAGAGCTTTAACCTGCCGCTGCTCATGCTGGGAGGTGGAGGCTACACCATTAGAAACGTGGCCCGCTGCTGGACTTTCGAGACAGCTGTAGCACTGGACAGCACCATTCCTAATGAGCTCCCGTACAATGATTACTTTGAGTATTTTGGACCTGACTTCAAGCTCCACATCAGCCCCTCCAACatgaccaatcagaacacaaatgaCTACCTGGAAAAGATCAAGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCTCCAGGCGTTCAGATGCAGGCCATCCCGGAGGATGCAGTTCAGGAAGACAGCGGAGATGAAGAGGACGACCCTGACAAACGCATCTCCATTCGTGCTCACGATAAGCGGATAGCCTGTGATGAAGAGTTCTCAGACTCTGAGGATGAAGGCCAGGGTGGACGGAGAAACGCAGCCAATTACAAGAAGCCAAAACGAGTGAAGACTGAAGAAGAGAAGGATGGAGAAGAGAAGAAAGATGTTAAAGAAGAGGAGAAAGCTTCAGAAGAGAAAATGGACACAAAGGGGCCAAAAGAAGAATTAAAAACAGTGTGAGGTGGGGGAGAAGGACTGCCAGTCCTCCTGGATGCATGTACTTAAGTCGTCAAACACCCTCATCTTCAAACATCAAacccacatttacacacacacacatacacatacatgctAGATGTTAGCTCTAGTCCTGAGCTAAGGACTGTAAATTATTTTGTAAGACTCGTTTTACTATTTGTAATCTAATGAAGCGGTATaaaagtttttacatttacaagtGTGAAATGACCAGATGTTTTTTTGTTTCGTGCTTTGGAACCATGTTTGTTTGCCTCCCTTATGTTACTATTTAGCGACGATAGCACCTCAGACACAGGACCACAAATAGCACATAACTTTACTGTCCCATCATGGGatgcttttttttctcttccccCTCCCCctcaaataattttaaatcatGGATGGAGATACTTATTGGCCGCTCTTACTTGGGTTTTCTCTGCGGATGCTGTTTGGTGTCCGGTGTCCTTTACCTCGTTTTTAAGCGCTAAATGTTTGGTTTTTATTCTGGTGTCTGTCTCTCGATACCTACATCTGTGCGGTGTGTAAGTACTCCGGTATGGTCGGGGCATGGCGAAGGCTTGCTGTATTGCTGTTAGATTCAAGATTTTTCTTTCTGTTGTGCTTTATTCTAGCATGTCAGTCGTGCAGCTGACCAGACATTTAGCCGTTTGGATTTTCCAGAGTTCAGTGGTTGTGAAATGTCCTTATTATAACAATGATTTTGGTAAATAAAGAGAAGTTCTCTGA
>TCONS_00028130
CCGGCAGGCGCAGGCTGTAATTGGAGGGTAAAATGGCGCTGAGTTCTCAAGGAACAAAGAAGAAAGTTTGCTATTATTATGACGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTATGGGCTGTATAGGAAAATGGAGATTTATCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATTTAACGTAGGGGAGGATTGTCCTGTCTTTGACGGCTTATTTGAGTTCTGTCAGCTCTCAACAGGTGGATCTGTTGCTGGTGCGGTGAAACTCAACAAACAGCAGACAGACATTGCCATTAACTGGGCAGGAGGTCTACATCATGCTAAGAAATCAGAGGCATCTGGATTCTGCTATGTCAACGACATTGTACTGGCCATTCTGGAGCTGCTCAAGTACCATCAAAGAGTGCTTTACATCGACATTGACATTCATCACGGTGATGGAGTTGAGGAAGCCTTTTACACAACAGACCGTGTCATGACTGTGTCTTTCCACAAGTATGGAGAGTATTTCCCGGGTACTGGAGACCTCAGAGATATTGGTGCAGGCAAGGGGAAGTATTACGCTGTAAATTACCCGCTCAGGGATGGTATTGATGATGAGTCCTATGAAGCCATATTCAAACCTGTAAGTCTGTAAACCGTACCAGATGTGACGATGTGTTTCTCTGAAATCAAGTCATGCAAATCTCCTTGTTTCTGATTGTCCTGTAGATCATGTCCAAAGTGATGGAGATGTACCAGCCCAGTGCTGTGGTGCTCCAGTGCGGCGCTGACTCTCTGTCCGGAGATCGATTGGGCTGCTTTAACCTTACCATTAAAGGTCATGCCAAGTGTGTAGAGTACATGAAGAGCTTTAACCTGCCGCTGCTCATGCTGGGAGGTGGAGGCTACACCATTAGAAACGTGGCCCGCTGCTGGACTTTCGAGACAGCTGTAGCACTGGACAGCACCATTCCTAATGAGCTCCCGTACAATGATTACTTTGAGTATTTTGGACCTGACTTCAAGCTCCACATCAGCCCCTCCAACatgaccaatcagaacacaaatgaCTACCTGGAAAAGATCAAGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCT
>TCONS_00029954
CCGGCAGGCGCAGGCTGTAATTGGAGGGTAAAATGGCGCTGAGTTCTCAAGGAACAAAGAAGAAAGTTTGCTATTATTATGACGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTATGGGCTGTATAGGAAAATGGAGATTTATCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATTTAACGTAGGGGAGGATTGTCCTGTCTTTGACGGCTTATTTGAGTTCTGTCAGCTCTCAACAGGTGGATCTGTTGCTGGTGCGGTGAAACTCAACAAACAGCAGACAGACATTGCCATTAACTGGGCAGGAGGTCTACATCATGCTAAGAAATCAGAGGCATCTGGATTCTGCTATGTCAACGACATTGTACTGGCCATTCTGGAGCTGCTCAAGTACCATCAAAGAGTGCTTTACATCGACATTGACATTCATCACGGTGATGGAGTTGAGGAAGCCTTTTACACAACAGACCGTGTCATGACTGTGTCTTTCCACAAGTATGGAGAGTATTTCCCGGGTACTGGAGACCTCAGAGATATTGGTGCAGGCAAGGGGAAGTATTACGCTGTAAATTACCCGCTCAGGGATGGTATTGATGATGAGTCCTATGAAGCCATATTCAAACCTGTAAGTCTGTAAACCGTACCAGATGTGACGATGTGTTTCTCTGAAATCAAGTCATGCAAATCTCCTTGTTTCTGATTGTCCTGTAGATCATGTCCAAAGTGATGGAGATGTACCAGCCCAGTGCTGTGGTGCTCCAGTGCGGCGCTGACTCTCTGTCCGGAGATCGATTGGGCTGCTTTAACCTTACCATTAAAGGTCATGCCAAGTGTGTAGAGTACATGAAGAGCTTTAACCTGCCGCTGCTCATGCTGGGAGGTGGAGGCTACACCATTAGAAACGTGGCCCGCTGCTGGACTTTCGAGACAGCTGTAGCACTGGACAGCACCATTCCTAATGAGCTCCCGTACAATGATTACTTTGAGTATTTTGGACCTGACTTCAAGCTCCACATCAGCCCCTCCAACatgaccaatcagaacacaaatgaCTACCTGGAAAAGATCAAGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCTCCAGGCGTTCAGATGCAGGCCATCCCGGAGGATGCAGTTCAGGAAGACAGCGGAGATGAAGAGGACGACCCTGACAAACGCATCTCCATTCGTGCTCACGATAAGCGGATAGCCTGTGATGAAGAGTTCTCAGACTCTGAGGATGAAGGCCAGGGTGGACGGAGAAACGCAGCCAATTACAAGAAGCCAAAACGAGTGAAGACTGAAGAAGAGAAGGATGGAGAAGAGAAGAAAGGTGAGCCAACAGGTACAAGCtgcttattttcatttattagcaAGTACAGCAGATAGATTTGAGATCTTTTGTTTGATTATACAGAAGTATTGTGTTTGAGTTTAGACAAGTGAGATTAACACTCTTCATGTTTAATACCAGATGTTAAAGAAGAGGAGAAAGCTTCAGAAGAGAAAATGGACACAAAGGGGTAGGTCATCACTCTCATTGTGGACTTGAGAATATGTGCTTTTCTGATATCAAGTGTCTCACTCGAAATTGGAGCCATTTTAGTTCCACGTGCCCATAACTTAATGTGACCTCAGAATCTAGATGGGCACATAATTATTATATCACATCTTCTGCATTGCCTTGCACATGAATGCTGGATCAGGCTAAAAGATGAACTTTTATATGCAGTGCTGCTtaatgtcagttccaaagcagtgggTCAATCAATAAATCTAAGGCAGGGTGGATGTTGCAAGCTTCTGTTTACAAAACATGGCATGACAACCATTTTATTTAATGTGCAACACACTGCAAGAGATGCAGACATGAGCTTTACGGTCAAGCAT
>TCONS_00028131
GCAGGCTGTAATTGGAGGGTAAAATGGCGCTGAGTTCTCAAGGAACAAAGAAGAAAGTTTGCTATTATTATGACGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTATGGGCTGTATAGGAAAATGGAGATTTATCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATTTAACGTAGGGGAGGATTGTCCTGTCTTTGACGGCTTATTTGAGTTCTGTCAGCTCTCAACAGGTGGATCTGTTGCTGGTGCGGTGAAACTCAACAAACAGCAGACAGACATTGCCATTAACTGGGCAGGAGGTCTACATCATGCTAAGAAATCAGAGGCATCTGGATTCTGCTATGTCAACGACATTGTACTGGCCATTCTGGAGCTGCTCAAGTACCATCAAAGAGTGCTTTACATCGACATTGACATTCATCACGGTGATGGAGTTGAGGAAGCCTTTTACACAACAGACCGTGTCATGACTGTGTCTTTCCACAAGTATGGAGAGTATTTCCCGGGTACTGGAGACCTCAGAGATATTGGTGCAGGCAAGGGGAAGTATTACGCTGTAAATTACCCGCTCAGGGATGGTATTGATGATGAGTCCTATGAAGCCATATTCAAACCTATCATGTCCAAAGTGATGGAGATGTACCAGCCCAGTGCTGTGGTGCTCCAGTGCGGCGCTGACTCTCTGTCCGGAGATCGATTGGGCTGCTTTAACCTTACCATTAAAGGTCATGCCAAGTGTGTAGAGTACATGAAGAGCTTTAACCTGCCGCTGCTCATGCTGGGAGGTGGAGGCTACACCATTAGAAACGTGGCCCGCTGCTGGACTTTCGAGACAGCTGTAGCACTGGACAGCACCATTCCTAATGAGCTCCCGTACAATGATTACTTTGAGTATTTTGGACCTGACTTCAAGCTCCACATCAGCCCCTCCAACatgaccaatcagaacacaaatgaCTACCTGGAAAAGATCAAGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCTCCAGGCGTTCAGATGCAGGCCATCCCGGAGGATGCAGTTCAGGAAGACAGCGGAGATGAAGAGGACGACCCTGACAAACGCATCTCCATTCGTGCTCACGATAAGCGGATAGCCTGTGATGAAGAGTTCTCAGACTCTGAGGATGAAGGCCAGGGTGGACGGAGAAACGCAGCCAATTACAAGAAGCCAAAACGAGTGAAGACTGAAGAAGAGAAGGATGGAGAAGAGAAGAAAGATGTTAAAGAAGAGGAGAAAGCTTCAGAAGAGAAAATGGACACAAAGGGG
>TCONS_00028132
GTTTCCCCTCTACACAGGCAGCGTCTGTTTGAGAATCTGCGGATGTTGCCTCATGCTCCAGGCGTTCAGATGCAGGCCATCCCGGAGGATGCAGTTCAGGAAGACAGCGGAGATGAAGAGGACGACCCTGACAAACGCATCTCCATTCGTGCTCACGATAAGCGGATAGCCTGTGATGAAGAGTTCTCAGACTCTGAGGATGAAGGCCAGGGTGGACGGAGAAACGCAGCCAATTACAAGAAGCCAAAACGAGTGAAGACTGAAGAAGAGAAGGATGGAGAAGAGAAGAAAGGTGAGCCAACAGGTACAAGCtgcttattttcatttattagcaAGTACAGCAGATAGATTTGAGATCTTTTGTTTGATTATACAGAAGTATTGTGTTTGAGTTTAGACAAGTGAGATTAACACTCTTCATGTTTAATACCAGATGTTAAAGAAGAGGAGAAAGCTTCAGAAGAGAAAATGGACACAAAGGGGTAGGTCATCACTCTCATTGTGGACTTGAGAATATGTGCTTTTCTGATATCAAGTGTCTCACTCGAAATTGGAGCCATTTTAGTTCCACGTGCCCATAACTTAATGTGACCTCAGAATCTAGATGGGCACATAATTATTATATCACATCTTCTGCATTGCCTTGCACATGAATGCTGGATCAGGCTAAAAGATGAACTTTTATATGCAGTGCTGCTtaatgtcagttccaaagcagtgggTCAATCAATAAATCTAAGGCAGGGTGGATGTTGCAAGCTTCTGTTTACAAAACATGGCATGACAACCATTTTATTTAATGTGCAACACACTGCAAGAGATGCAGACATGAGCTTTACGGTCAAGCAT

Function

symbol description
hdac1 Enables transcription corepressor activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within with a positive effect on secondary heart field specification. Acts upstream of or within several processes, including animal organ development; determination of dorsal identity; and nervous system development. Predicted to be located in nucleus. Predicted to be part of histone deacetylase complex. Is expressed in immature eye; nervous system; pectoral fin; and pharyngeal arch. Orthologous to human HDAC1 (histone deacetylase 1).

GO:

id name namespace
GO:0002244 hematopoietic progenitor cell differentiation biological_process
GO:0006325 chromatin organization biological_process
GO:0033687 osteoblast proliferation biological_process
GO:0001764 neuron migration biological_process
GO:0031017 exocrine pancreas development biological_process
GO:0048263 determination of dorsal identity biological_process
GO:0048565 digestive tract development biological_process
GO:0050673 epithelial cell proliferation biological_process
GO:0021903 rostrocaudal neural tube patterning biological_process
GO:0060218 hematopoietic stem cell differentiation biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0016575 histone deacetylation biological_process
GO:0031101 fin regeneration biological_process
GO:0008285 negative regulation of cell population proliferation biological_process
GO:0050769 positive regulation of neurogenesis biological_process
GO:0001889 liver development biological_process
GO:0070932 histone H3 deacetylation biological_process
GO:0070933 histone H4 deacetylation biological_process
GO:0048935 peripheral nervous system neuron development biological_process
GO:0030318 melanocyte differentiation biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0060028 convergent extension involved in axis elongation biological_process
GO:0007420 brain development biological_process
GO:0021754 facial nucleus development biological_process
GO:0060042 retina morphogenesis in camera-type eye biological_process
GO:0048706 embryonic skeletal system development biological_process
GO:0048709 oligodendrocyte differentiation biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0000118 histone deacetylase complex cellular_component
GO:0005634 nucleus cellular_component
GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) molecular_function
GO:0046872 metal ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0004407 histone deacetylase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-020419-32 Enables transcription corepressor activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within with a positive effect on secondary heart field specification. Acts upstream of or within several processes, including animal organ development; determination of dorsal identity; and nervous system development. Predicted to be located in nucleus. Predicted to be part of histone deacetylase complex. Is expressed in immature eye; nervous system; pectoral fin; and pharyngeal arch. Orthologous to human HDAC1 (histone deacetylase 1).

Ensembl:

ensembl_id ENSDARG00000015427

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028128 False 5435 mRNA 0.40 14 29808471 29821601
TCONS_00028129 False 2242 mRNA 0.46 14 29808699 29818648
TCONS_00028130 False 1249 lncRNA 0.48 10 29808713 29814838
TCONS_00029954 False 2041 lncRNA 0.46 11 29808713 29815732
TCONS_00028131 False 1439 mRNA 0.48 13 29808722 29815366
TCONS_00028132 True 849 lncRNA 0.43 2 29814782 29815732

Neighbor

gene id symbol gene type direction distance location
XLOC_014116 marcksl1b coding upstream 7659 29798064 ~ 29800812 (+)
XLOC_014115 NA coding upstream 56728 29746138 ~ 29751743 (+)
XLOC_014114 NA coding upstream 201468 29459117 ~ 29607003 (+)
XLOC_014113 ldlrap1a coding upstream 444692 29337789 ~ 29363779 (+)
XLOC_014112 maco1a coding upstream 474604 29303847 ~ 29333867 (+)
XLOC_014118 si:ch73-130a3.4 coding downstream 32622 29854223 ~ 29860334 (+)
XLOC_014119 tspan13b coding downstream 566398 30387999 ~ 30399876 (+)
XLOC_014120 mrps18b coding downstream 601516 30423117 ~ 30428901 (+)
XLOC_014121 si:ch211-215a10.4 coding downstream 628524 30450125 ~ 30468234 (+)
XLOC_014122 BX510301.2 coding downstream 673508 30495109 ~ 30516680 (+)
XLOC_014111 CU469458.1 non-coding upstream 605214 29203142 ~ 29203257 (+)
XLOC_014110 NA non-coding upstream 700777 29105935 ~ 29107694 (+)
XLOC_014109 NA non-coding upstream 984081 28788968 ~ 28824390 (+)
XLOC_014123 BX510301.1 non-coding downstream 696854 30518455 ~ 30518573 (+)
XLOC_014124 BX510301.3 non-coding downstream 766265 30587866 ~ 30589951 (+)
XLOC_014125 CU463182.1 non-coding downstream 809342 30630943 ~ 30631060 (+)
XLOC_014127 NA non-coding downstream 903395 30724996 ~ 30725703 (+)
XLOC_014128 NA non-coding downstream 978451 30800052 ~ 30801988 (+)

Expression


Co-expression Network