XLOC_014143 (acot13)


Basic Information

Item Value
gene id XLOC_014143
gene name acot13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 31576849 ~ 31579383 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028169
GTATAACTTGGGCCAGCTTTCAAGCGGTTTACAATAGTGAACTTGTCCTTCTCTGTGTTTTGTTACTTAATGCTAGAATCAGTAATGGCTTCATTAACGCTGAATACAGTCAAACAGATCTTCAGAGCGATGGCGGACAGTCCTGGGTTTGACCGGGTTTTAAGTAAGGTGGAGGTTCTGTCTGCGGCTCCCGGTAAGGTGGTGTGTGAGATGAAGGTGGAGGAGCAGCACACGAACAGAGGGGGAACTCTTCACGGAGGAATGACAGCCACGCTCGTGGACATGATCTCCACCATGGCCATCATGTACAGTGAGAGAGGAGCTCCTGGAGTCAGTGTGGACATGAACATAACATATATGAATGCCGCTAAAATTGGAGAAGACATCCTGATCACTGCACAGGTTTTAAAACAAGGACGGACTCTGGCATTCGCAACAGTAGATCTCACCAACAAGGCCAACGGAAAACTCATCGCTCAGGGAAGACACACAAAACACCTCGGCAGCTAATTACGCACATGCCCTGTATATTATGTCTGTCTTGATGTTACGCAATAAAGTCTGGCATCAAATTATGTTA
>TCONS_00028170
ATGGCTTCATTAACGCTGAATACAGTCAAACAGATCTTCAGAGCGATGGCGGACAGTCCTGGGTTTGACCGGGTTTTAAGTAAGGTGAGTGTTGTGGAGGTTCTGTCTGCGGCTCCCGGTAAGGTGGTGTGTGAGATGAAGGTGGAGGAGCAGCACACGAACAGAGGGGGAACTCTTCACGGAGGAATGACAGCCACGCTCGTGGACATGATCTCCACCATGGCCATCATGTACAGTGAGAGAGGAGCTCCTGGAGTCAGTGTGGACATGAACATAACATATATGAATGCCGCTAAAATTGGAGAAGACATCCTGATCACTGCACAGGTTTTAAAACAAGGACGGACTCTGGCATTCGCAACAGTAGATCTCACCAACAAGGCCAACGGAAAACTCATCGCTCAGGGAAGACACACAAAACACCTCGGCAGCTAATTACGCACATGCCCTGTATATTATGTCTGTCTTGATGTTACGCAATAAAGTCTGGCATCAAATTATGTTA

Function

symbol description
acot13 Enables palmitoyl-CoA hydrolase activity. Orthologous to human ACOT13 (acyl-CoA thioesterase 13).

GO:

id name namespace
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0016290 palmitoyl-CoA hydrolase activity molecular_function

KEGG:

id description
ko01004 Lipid biosynthesis proteins

ZFIN:

id description
ZDB-GENE-060503-437 Enables palmitoyl-CoA hydrolase activity. Orthologous to human ACOT13 (acyl-CoA thioesterase 13).

Ensembl:

ensembl_id ENSDARG00000061728

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028169 False 580 mRNA 0.47 3 31576849 31579383
TCONS_00028170 True 505 mRNA 0.48 3 31576933 31579383

Neighbor

gene id symbol gene type direction distance location
XLOC_014141 tmem64 coding upstream 23331 31532043 ~ 31553518 (+)
XLOC_014140 pip4p2 coding upstream 145822 31404686 ~ 31431027 (+)
XLOC_014139 NA coding upstream 228501 31250920 ~ 31348348 (+)
XLOC_014138 NA coding upstream 358750 31157647 ~ 31218099 (+)
XLOC_014137 NA coding upstream 423759 31138827 ~ 31153090 (+)
XLOC_014144 BX957279.1 coding downstream 12141 31591524 ~ 31591540 (+)
XLOC_014145 stmn2b coding downstream 191887 31771270 ~ 31790551 (+)
XLOC_014146 NA coding downstream 221122 31800505 ~ 31859540 (+)
XLOC_014147 si:dkeyp-34f6.4 coding downstream 293925 31873308 ~ 31895595 (+)
XLOC_014148 tpd52 coding downstream 325453 31904836 ~ 31939039 (+)
XLOC_014133 NA non-coding upstream 606824 30969012 ~ 30970025 (+)
XLOC_014130 NA non-coding upstream 733616 30841639 ~ 30843233 (+)
XLOC_014149 NA non-coding downstream 364125 31943508 ~ 31954728 (+)
XLOC_014150 NA non-coding downstream 375576 31954959 ~ 31969766 (+)
XLOC_014151 BX119962.1 non-coding downstream 479094 32058477 ~ 32058599 (+)

Expression


Co-expression Network