XLOC_014159


Basic Information

Item Value
gene id XLOC_014159
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 32765283 ~ 32780918 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029971
gtctgaattattattttatagttccTTCTTTAAACTGAACTAGGAGCAGCTGAAGGACTGTtatgtaatttgttttgtttatacagCGTTTGCAAGTGAAATATGCTGACGGTgaaactaataagactttttgTGCCGCGTTGCACATGCGAGAAAGTTCTGTGTCCTCATAAAATTCTGCATTCCTCGAAGTTTTACCTTTTGTTGGAGGTAGATTTTCATATTAGGCTCCAAAATACAAACAGACCTGGACAAATTCATTCAGACGGAACAGAAAGTCCTGGCACGTGGGCAGCGATGGCACCCATTTCCACGGCTCCCTCCACATGGAACATCTGGTCATCAAAGTATATGTGGGGCCGGATTTTCTCCAGCATGGGGCCTTTTGGAGCCCCGGCCAGGAAAAGAGCCTCGTCTGTTTCGAGTCCCCAGGCACGGAGAGTCTTTAAGGCGCGGATGCCTGAGCTGGCTGCGCTGCGGGCCGTCACGAGTTCGCCACCGGAACGATCAAAACCAGTCCAGCTGTGGCGCTGCAGGGAGCTGAGCAGGAAGTGGCTGCTTTGTGATACAGAGGTTACAGGAGTCATATGCATCTCTGTGGGAAGATGTGATTGGCCAGCTGGAGATCTATCGTCTAAGaaaacatttgcatttacagTTCTGTGTCCTCAAAGTTTTGAAgctacttaaagggatagctcacgcaaaaatgaaaacattctcatcatttactcactcttcatttGTTACAAAcgtttctctcttctgttgaaaaaaaacatttttttaaagaaagctaaaaacctgtaattagggatgctccgatcaggatttttgcagcagaTACCGAGTacattccttgtcatggtgatcgccAGATACCGAgaaccgattctgatgcttcaagctttataatgtataaagcacattttccctttaAGTATGATACTTAAATGGAGTTTcctccttacctaagagaataaattaaagaTCTGCATATAATCCCCTAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029971 True 1010 lncRNA 0.43 3 32765283 32780918

Neighbor

gene id symbol gene type direction distance location
XLOC_014158 NA coding upstream 46487 32716578 ~ 32718796 (+)
XLOC_014157 tmem54b coding upstream 146026 32603627 ~ 32619257 (+)
XLOC_014156 heyl coding upstream 204692 32553874 ~ 32560591 (+)
XLOC_014155 atxn1a coding upstream 303687 32257472 ~ 32461596 (+)
XLOC_014154 fam8a1a coding upstream 558464 32201991 ~ 32206819 (+)
XLOC_014160 stk3 coding downstream 26318 32807236 ~ 32820107 (+)
XLOC_014161 rida coding downstream 41351 32822269 ~ 32884513 (+)
XLOC_014162 rpl30 coding downstream 74221 32855139 ~ 32860780 (+)
XLOC_014163 atp6v1c1b coding downstream 166992 32947910 ~ 32966762 (+)
XLOC_014164 spire1a coding downstream 198214 32979132 ~ 33072157 (+)
XLOC_014151 BX119962.1 non-coding upstream 706684 32058477 ~ 32058599 (+)
XLOC_014150 NA non-coding upstream 795517 31954959 ~ 31969766 (+)
XLOC_014149 NA non-coding upstream 810555 31943508 ~ 31954728 (+)
XLOC_014146 NA non-coding upstream 905743 31800505 ~ 31859540 (+)
XLOC_014169 NA non-coding downstream 1014830 33795748 ~ 33798410 (+)
XLOC_014171 dre-mir-187 non-coding downstream 1354689 34135607 ~ 34135695 (+)
XLOC_014173 BX649545.1 non-coding downstream 1426244 34207162 ~ 34207280 (+)
XLOC_014176 NA non-coding downstream 1499846 34280764 ~ 34281978 (+)
XLOC_014178 NA non-coding downstream 1920759 34701677 ~ 34738365 (+)

Expression


Co-expression Network