XLOC_014164 (spire1a)


Basic Information

Item Value
gene id XLOC_014164
gene name spire1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 32979132 ~ 33072157 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028203
ATGTTCCTTACTAGTTTcaattttacttactttttaaattgataagaattttaaattaataaaaaaattcatttaatcGTCGTTTTAATTCCATGGCCGAGGACTGACTGACTCTTAGACCATGCGGAAAAGTCATATGAGCGCCTCCGGCAgtccaacagcagcagcagcaaccgCTCACAGTCCGCGCTCAGTCATAAGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGGCTCACGCACTAGGCAGCGGTCATGCGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAG
>TCONS_00028204
ATGTTCCTTACTAGTTTcaattttacttactttttaaattgataagaattttaaattaataaaaaaattcatttaatcGTCGTTTTAATTCCATGGCCGAGGACTGACTGACTCTTAGACCATGCGGAAAAGTCATATGAGCGCCTCCGGCAgtccaacagcagcagcagcaaccgCTCACAGTCCGCGCTCAGTCATAAGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGGCGCAGGCAAAAGTATAAGCACTCCACAGGACTTGTTCAGAAGCTCAGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGATGTCTTCAGACGGCAAGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAG
>TCONS_00028202
ATGTTCCTTACTAGTTTcaattttacttactttttaaattgataagaattttaaattaataaaaaaattcatttaatcGTCGTTTTAATTCCATGGCCGAGGACTGACTGACTCTTAGACCATGCGGAAAAGTCATATGAGCGCCTCCGGCAgtccaacagcagcagcagcaaccgCTCACAGTCCGCGCTCAGTCATAAGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGTAATGCGTCCTCTTAGCATGTCTGTCAGTTTTGACTCATCAGGCGCAGGCAAAAGTATAAGCACTCCACAGGACTTGTTCAGAAGCTCAGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGATGTCTTCAGACGGCAAGGCTCACGCACTAGGCAGCGGTCATGCGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAG
>TCONS_00028201
ATGTTCCTTACTAGTTTcaattttacttactttttaaattgataagaattttaaattaataaaaaaattcatttaatcGTCGTTTTAATTCCATGGCCGAGGACTGACTGACTCTTAGACCATGCGGAAAAGTCATATGAGCGCCTCCGGCAgtccaacagcagcagcagcaaccgCTCACAGTCCGCGCTCAGTCATAAGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGTAATGCGTCCTCTTAGCATGTCTGTCAGTTTTGACTCATCAGGCGCAGGCAAAAGTATAAGCACTCCACAGGACTTGTTCAGAAGCTCAGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGGCTCACGCACTAGGCAGCGGTCATGCGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAG
>TCONS_00028205
ATGTTCCTTACTAGTTTcaattttacttactttttaaattgataagaattttaaattaataaaaaaattcatttaatcGTCGTTTTAATTCCATGGCCGAGGACTGACTGACTCTTAGACCATGCGGAAAAGTCATATGAGCGCCTCCGGCAgtccaacagcagcagcagcaaccgCTCACAGTCCGCGCTCAGTCATAAGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGGCGCAGGCAAAAGTATAAGCACTCCACAGGACTTGTTCAGAAGCTCAGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAGCGTCCCAAACGTCAAGGAAAaaag
>TCONS_00028206
AGTATCGACACACAGGCGGCAGAGGTGGACACGCATACGGTGTTTCTCGATGACAGAACTAACGTAAACCTACTGTTTCTGTCTCTTTTTCACCCAAACGCACAGTCAGTCCCGCTCTCGGGAAGCCCGGAGACCAAGAATGACTGACGGAGGAATGTTAATCTCACCGTCGGCTCTCCAGGATCCCGGAGATGGAGCGCGACCTGAAGACATCGCTATGGATTGTACGGACGGGGAAGAGGAATTGTGCTTGGAGGAGATTTTAACACTGTACAGTCAACCGATCAACGAGGAACAAGCCTGGGCCGTGTGTTATCAGTGCTGCAGGTGGTTAACGCAAAAACACAGGCGGAAAGAGACAGGCGTGAGTCCACCTGGACGGATTGCGGGTCCTGGAGATGTGAGGATCCGGAAGGACGGGAATGTGAAATTATATCAGCCGAGCAATCCAGATAAGCACACACCGCCCAGCTCATCAATAGAGATCATCGAGTCTCTGGGCATCATGATCTATAAGGCTCTGGATTATGGCCTGAAGGAGCACGAGGAAAGAGAACTGAGTCCTCCTCTGGAGCAACTTATCGACCTCATGACCAACATGGCGGACACAGAAACAGACTGTCCTGATGAGGGATACGAGGCCACggaggaggaggatgagggaGAAGAAGAGAACGCTGAAGTTTCCAATGTTCGAGGATACCGAGACATAATTTCTCTCTGTTTGTCTCACCTTCCCAGTCCATCTGATGCTCCAAACCACTACCAGGCCGTGTGTCGAGCCCTGTACGCTGAGACCAAGGAGCTCCGCACTTTCCTAGAGAAGATCAAGAGTGCCAAAGAGAATTTGCGGAAGATGGAAGGAGAAACAGAGGAGCCCGTCAGAGACCTGAATGAGCTGCAGAATGCTGACTGGGCTCGGTTTTGGGTGCAGGTGATGAGGGACCTGAGGCACGGCGTGAAGCTGAAGAAGGTGCAGGAGCGTCAGTATAACCCTCTAGCCATCGAGTACCAGCTCACGCCTTACGAGATGCTCATGGATGACATCCGATCCAAACGCTACAAACTCCGCAAGGTCATGGTTAATGGTGACATTCCTCCGAGGTTAAAGAAAAGTGCTCACGAGATCATCCTGGAGTTCATTCGATCGAGGCCTCCATTAAATCCTgTTTCTGCTCGTAAACTGAAGCCTCATGCTCCTCAACCTCCGACTCTCCATGAGCGTATCCTTGAGGAGATCCGATCAGAGAGAAAGCTTAGGCCCGTGTCTCCTGATATGATCCGCAGGAGTCGACTCGGCGCAGGCAAAAGTATAAGCACTCCACAGGACTTGTTCAGAAGCTCAGATATCCCAGATGGACCTCGCAAGTTGGCCATCAGCACACTATCTCTGGCTAACGGCACGTCACCGGCTCGAAGTCCTGTGAACGGTGTAGCCGGAGGGCATTCACTGTCCCAGAGGAAAAGGTTACTCAAAGCACCTACACTAGCCGAACTGGACAGCTCCGACTCTGAGGAGGAGCAAAGCACCCGCAAATCTGACAGCAGCTCCAGCATATCCACCTCACTGGTTGAGGACACGTCTCCAGAGTCTGTCATGGGCAAAAAACctccACCTCAGTTCCTGCCCATTTCTTCCACACCTCAGCCTGATAAACGCATCGCTCCTCAGAGGAGACACTCCATTGAGAAAGAGGCTCCCACCAACATACGCCACTTCCTGCCTCCATCTCGACAGAACTCCAAATCTCTGGCTCACGCACTAGGCAGCGGTCATGCGGAGGAGTTCTGCTTCCCTGTCGAGTGTTTGACTCTGACCGTGGAGGAGGTGATGCACATCAGACAGGTTCTTGTCAAAGCCGAACTGGAGAAGTTCCAGCAgtataaagacatttataatgcaCTGAAGAAAGGAAAGCTTTGCTTCTCATGTCGGTCGAAGAAGTTCTCATTATTTACCTGGTCCTACACCTGTCAGTTCTGTAAGAGGCCGGTTTGCTCACAGTGCTGCAAGAAGATGAAATTGCCCTCCAAGCCTCACGCCAGCCTGCCCATCTCCTCTTTGGGTCCCAGTATCCTGCCCAAAAAAGAGCCCGGAGCATCATCAGCCCCGACAGATAAAACCTCCTCCACATCCAGCCACAAGAAAAACAGCCTTCAGCGCTCATTGTCTAGATCATCAAAACACGGCGATCGCTCGTCTTCTAAAGACGAGCTGGAGCTTCCGGAGCAGTTCACCGAGGACTGGAGCACCATGGAGGTCTGCGTGGACTGCAAAAAATTCATCAACGACATCATCAGCAACAGCCGCCGCAACCTGTCCACCAAACGTGCCCGCCTGCACCGCCGGACACACTCCGTCTACTCGTCCAGCACCAGCTCCTCCAACTACAAACCAACCGAGCGCACCATCAAAGAGGTCTAGCGTCCCAAACGTCAAGGAAAaaaggtgtttgtttttttctctgttaCGTCCGACAGCCCACTTTTAGCTTTGTAAGCATACCTTCCATACCTCTTCTTTTCCTTTTAAAAAGTGCCAGAGGCGAAGGAAGTTAAAAAGCCCGTCCCTCTTCCAGCATGAGTCCTTAAGCACCAGCCTTCTCAGGAAACGGTTTGGAATGTAGTTTCGACTTATTTTAACCAACAAATCTGAATTATTAATGACAAAGTGTGAACAAAAGAAAGCGCAAGGCTGCTTTGAGCACCGAAAGGCCTGAATGTACACTTTTTTCAATGTAGTGAAGTCAAACAGAGCTGGAGTTtgtgtaaataatcactaaaggTTGTAAATATCCATactttttcccccttttagtTAAGATTTAGTCGATTGCTTGACCGACCAAGAGACTGTAGATGAATTCAGCCTCCGTGACAATTCAAGATCAAGTCTTACCaaatgttttctctctctctctctctctcttgtcgTTTGTTAAAATTGCTGCTGTATTAGTGATGAACGCCGTTTTAGAGTACTTacagatatatatttttcctgATGGCAGATTTTAGATGAAGTCaaggttgtttttttaaagagcgGATGCTGAAAGCTGTGGCGTTTCTTAAAGGAGTTGATCGGCTGTGCCAAACAAATCTCCACAATCCGAGCAATATGTGTCTTGGACCTGATGTACATATTCAAAAAAAGCATTTAGCAGAGACGACACACGAAGAAGGAAAGCAGTTCTCTCTTTTAAAACAGGACTTTTGTATGGATATGTTTGTGTACATGCTGTATATCCAAATCTCATCCGATCCACTTATCTATTAAAAATAGGCTCTATTGTTAAAAAGCTATGATTTCTATTATAAATAATgatccttttatttttttgtttagtgtcAAATAGCTTTTTTCAACTTCACTATTCACTtcactgttttttgttttcattattatgtcttaaattaagttataatatattattaattacccatTTTGTGCAATGAAATGCTCCGGCATCTCGAATATGAAGGTACTTATGTCAGGGTATCTGGAAGattgtttctgtttttacttaattaaaaaacaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgtagtgGTGTACAGGCCTGTTGACATGCTTTTCTGTTTTGTGCAAAACTGACTGTACTGCCTTTCTCTACAGAATGATTGGTGTGCATGatgaaatagattttttaaaataagaacagAATTGCCAATAAATAAAGCATTTGAAATTTGA

Function

symbol description
spire1a Predicted to enable actin binding activity. Predicted to be involved in several processes, including actin filament organization; cytoskeleton-dependent cytokinesis; and establishment of meiotic spindle localization. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in several cellular components, including cleavage furrow; cytosol; and perinuclear region of cytoplasm. Predicted to be active in cell cortex and cytoplasmic vesicle membrane. Orthologous to human SPIRE1 (spire type actin nucleation factor 1).

GO:

id name namespace
GO:0048193 Golgi vesicle transport biological_process
GO:0036089 cleavage furrow formation biological_process
GO:0046907 intracellular transport biological_process
GO:2000781 positive regulation of double-strand break repair biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0015031 protein transport biological_process
GO:0051295 establishment of meiotic spindle localization biological_process
GO:0040038 polar body extrusion after meiotic divisions biological_process
GO:0030041 actin filament polymerization biological_process
GO:0045010 actin nucleation biological_process
GO:0051639 actin filament network formation biological_process
GO:0048471 perinuclear region of cytoplasm cellular_component
GO:0005829 cytosol cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005886 plasma membrane cellular_component
GO:0032154 cleavage furrow cellular_component
GO:0005938 cell cortex cellular_component
GO:0031410 cytoplasmic vesicle cellular_component
GO:0016020 membrane cellular_component
GO:0030659 cytoplasmic vesicle membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-119 Predicted to enable actin binding activity. Predicted to be involved in several processes, including actin filament organization; cytoskeleton-dependent cytokinesis; and establishment of meiotic spindle localization. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in several cellular components, including cleavage furrow; cytosol; and perinuclear region of cytoplasm. Predicted to be active in cell cortex and cytoplasmic vesicle membrane. Orthologous to human SPIRE1 (spire type actin nucleation factor 1).

Ensembl:

ensembl_id ENSDARG00000035868

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028203 False 2576 mRNA 0.52 17 32979132 33070812
TCONS_00028204 False 2615 mRNA 0.51 18 32979132 33070812
TCONS_00028202 False 2684 mRNA 0.51 20 32979132 33070812
TCONS_00028201 False 2666 mRNA 0.51 19 32979132 33070812
TCONS_00028205 False 2621 mRNA 0.51 17 32979132 33070836
TCONS_00028206 True 3770 mRNA 0.47 18 32979331 33072157

Neighbor

gene id symbol gene type direction distance location
XLOC_014163 atp6v1c1b coding upstream 12370 32947910 ~ 32966762 (+)
XLOC_014161 rida coding upstream 94619 32822269 ~ 32884513 (+)
XLOC_014162 rpl30 coding upstream 118352 32855139 ~ 32860780 (+)
XLOC_014160 stk3 coding upstream 159025 32807236 ~ 32820107 (+)
XLOC_014159 NA coding upstream 198214 32765283 ~ 32780918 (+)
XLOC_014165 fam91a1 coding downstream 21238 33093395 ~ 33137720 (+)
XLOC_014166 lratd2 coding downstream 67007 33139164 ~ 33140403 (+)
XLOC_014167 triqk coding downstream 392531 33464688 ~ 33515742 (+)
XLOC_014168 runx1t1 coding downstream 481429 33553586 ~ 33785914 (+)
XLOC_014169 NA coding downstream 723591 33795748 ~ 33798410 (+)
XLOC_014158 NA non-coding upstream 260336 32716578 ~ 32718796 (+)
XLOC_014151 BX119962.1 non-coding upstream 920533 32058477 ~ 32058599 (+)
XLOC_014150 NA non-coding upstream 1009366 31954959 ~ 31969766 (+)
XLOC_014149 NA non-coding upstream 1024404 31943508 ~ 31954728 (+)
XLOC_014171 dre-mir-187 non-coding downstream 1063450 34135607 ~ 34135695 (+)
XLOC_014173 BX649545.1 non-coding downstream 1135005 34207162 ~ 34207280 (+)
XLOC_014176 NA non-coding downstream 1208607 34280764 ~ 34281978 (+)
XLOC_014178 NA non-coding downstream 1629520 34701677 ~ 34738365 (+)

Expression


Co-expression Network