XLOC_014178


Basic Information

Item Value
gene id XLOC_014178
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 34701677 ~ 34738365 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029977
GAGAAATGGAGGAGGCTAAAAGCTGTCTATGAGTAAGGAGCTCGATAAACCCTGGAGGAAGCTGTTAGAGTTCCCATTCATCTTGCTGGATCTTATTTCTTAAGGGGTTTAAgCCCAGCAGTTTCTCCAGAGAGGTGCCTGATATGTGGGCGAAGTTCTCCACAAAATTCCGCGGAGCCTTGAACACTCGAAGGACCTTTTCGTCAGCACCGGACACAAACTGAAAGCGGCCAACCATAGTCAGACACTGCATATCGTAGCCGTGGATCTGCGGTCTTGAGATCTCATGCCAGGCCAATACGGGAACTGCAAGAGACGGAAATATTCTCCTCACTCACACGGAAAAAAGGGACCAAGTCTATTCCCGGCTCCCAGACGCAAAATACAGCTACAGTCCAGACGTGAATAATGTAACAGGCAGGCTACCGTCACCCCAGGACATATTTAAAGCACAGAATGAGATTTGAACATGTGGGAGATGGACAATACAGCAAATCAACATGAAGCAGAGGGTGCCTCAGCTTACCTCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029977 True 531 lncRNA 0.49 3 34701677 34738365

Neighbor

gene id symbol gene type direction distance location
XLOC_014177 gabbr2 coding upstream 21939 34311374 ~ 34679738 (+)
XLOC_014176 NA coding upstream 419699 34280764 ~ 34281978 (+)
XLOC_014175 si:ch211-9n13.3 coding upstream 422504 34274504 ~ 34279173 (+)
XLOC_014174 galnt12 coding upstream 442011 34230108 ~ 34259666 (+)
XLOC_014172 poc1bl coding upstream 483521 34169055 ~ 34218156 (+)
XLOC_014179 abitram coding downstream 4341 34742706 ~ 34746878 (+)
XLOC_014180 NA coding downstream 10673 34749038 ~ 34751777 (+)
XLOC_014181 NA coding downstream 149210 34887575 ~ 34914799 (+)
XLOC_014182 ccn4a coding downstream 211835 34950200 ~ 34958185 (+)
XLOC_014183 wdyhv1 coding downstream 264114 35002479 ~ 35004947 (+)
XLOC_014173 BX649545.1 non-coding upstream 494397 34207162 ~ 34207280 (+)
XLOC_014171 dre-mir-187 non-coding upstream 565982 34135607 ~ 34135695 (+)
XLOC_014169 NA non-coding upstream 903267 33795748 ~ 33798410 (+)
XLOC_014159 NA non-coding upstream 1920759 32765283 ~ 32780918 (+)
XLOC_014185 NA non-coding downstream 623115 35361480 ~ 35363590 (+)
XLOC_014186 CR753876.1 non-coding downstream 630237 35368602 ~ 35369837 (+)
XLOC_014187 NA non-coding downstream 635168 35373533 ~ 35379985 (+)

Expression


Co-expression Network