XLOC_014188


Basic Information

Item Value
gene id XLOC_014188
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 35720977 ~ 35723375 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029999
GGAACATGAGGCTCTTTCTTGAAATGTTGCTTTTAGATTAGCCATCTAGAGTTGTTTTGGACATGAAAACAGCACTGTGATATGGTCTGCTCAATAAGTGCTTTATTATAACCAAGTGAATATTAGTTTGTGTCAAAGGCCTATTGATAAAATGGACCAATGCTCAACGGTAGGTCAGAATTAATGATttattcacactgtaaaaaatttttaagtcagtacaacaacaaaaaaaaaaagaaaaaaaaagaaaaaaaaaacataatctttatttcctttcactttttcttgtttactcaacttttgaaaacatcagctgcactgacctaaaattatttgtcagcaatacaaaaaacatttagtatCATTTTTGGaacatttagttgggttaacataagattattagttttctggacaggtgaactactctgtaacaaaactttttaagttgtgccaactgaacattttttgtCTGCATAACTGGAAAGCCTGaagttgaatgaaaaaaaaattccttttgttcttttctcctgtactcaatatatatttttattataatttttttcacctCAAATTAACAGAACACTAGAGAGTACTCAGCTGCACTGAGTACAAagacaaagatcaaaacatggcaggacaaacagggAAAAATGTTTTGTAATGCTTCCCATGTGAAGCATGCCTTCCtgtttttttaattgaacaatGTTTGTTCGTTCTTATAATGTATTTTATCTTAGTTCCAATTTCCAAAAgagttttttgttcactcaacttcagacattttaggtcggtgcaactgatgttttcaaaagttgagtacaCATCAGTgccaatggtgtagtggttagtgcgttgacacatAGCACTCCAGTGTTCACAGCGAAGTTCAATTTCCACCTACaggtcctatgccaatccttcGCCTCTCCCCATGCTTTTCTGTCTATACTCCCTACTGTCCTAAAAAAtaaacgtgaaaaaaaaaaattggatagaCGAGGAAAAAAGACAAAGGAAATaagagttatgttttttttttgttcactcaactcaACTTCATGTTTTTTTGTTCAGTTGGCACAAAGTGAAAAAGCTTTGTTACAGAGTAGCTCACCTCTCTAGAAAACAAATAATCTTATCCAAGTAACCCAACTTgatgttttttgtattactgacaaagAATTTTAGGtaagtgcagctgatgttttcaacagttgagtgaacaagaaaaagcgAAAGAAAATAaggattgtttttttgttgtactgactgaattttttttttttacaaagcatATATGGGTAAATAAATTAGTCCTACTAGACTTTATGCCCAACTTAAAtgaaaagttcacccaaaaagaaaaAATTCTCTCTTCTCTCTGTGTGTGACCATTTGATGATTTCCATTTACCTCCATATTATTTTTCTCCACTATGGAGTTCATTGGGGACTATCAACAATTGTGTTACTAATGGTCTTCAAAGCTATGCTTTTCAACAGCTTGAGGGGGAGTACATGGTGAACAAATCTTTATTTGGGGGGTGAACTTTAACTTTCTCTTTAAATGCAGTAAGCATACAAAAACGCTATAGACAAATTGTTATAAGAAAAGACTTAAGAAGGTAtttgcatgaaataaaaaaacctgGACCAGgtggaaaaaaaacatgccatCCTTGGTGAAACATCAAGAGAATCTTCTTGACACAAGCTCTCAATGCAATACTTACAATGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029999 True 1744 lncRNA 0.33 2 35720977 35723375

Neighbor

gene id symbol gene type direction distance location
XLOC_014187 NA coding upstream 340992 35373533 ~ 35379985 (+)
XLOC_014186 CR753876.1 coding upstream 351140 35368602 ~ 35369837 (+)
XLOC_014185 NA coding upstream 357387 35361480 ~ 35363590 (+)
XLOC_014184 zgc:91910 coding upstream 703930 35013129 ~ 35017047 (+)
XLOC_014183 wdyhv1 coding upstream 716030 35002479 ~ 35004947 (+)
XLOC_014189 BX537287.1 coding downstream 55467 35778842 ~ 35778957 (+)
XLOC_014190 angpt2b coding downstream 76009 35799384 ~ 35852390 (+)
XLOC_014191 NA coding downstream 139834 35863209 ~ 36018954 (+)
XLOC_014192 NA coding downstream 387567 36110942 ~ 36115841 (+)
XLOC_014193 CR936278.1 coding downstream 479703 36203078 ~ 36203195 (+)
XLOC_014181 NA non-coding upstream 806178 34887575 ~ 34914799 (+)
XLOC_014180 NA non-coding upstream 969200 34749038 ~ 34751777 (+)
XLOC_014194 AL732499.1 non-coding downstream 519416 36242791 ~ 36242908 (+)

Expression


Co-expression Network