XLOC_014207 (nxph1)


Basic Information

Item Value
gene id XLOC_014207
gene name nxph1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 37848830 ~ 37928041 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028253
AAAAACTTCATTGATTTCGCTCATGAAACTTCTTGAAACTTTCTCAAAAGGCCCATGCTGAAACGAACAACTTGAGAGCATACTGAAATCAAAAAAACATTTGCCGTCTTGAGCAGTGAGACATTTGTCATTGTTTAAATAGTCGAGTTTGTAATTCACCATAATCGGAGTCATTAACCCTCCTGATTGTGTGCGGCTTTCTGAGATGCAGATGCGCTGGACTTTGTGTACGAGTATCGGTCTGGCCGCGTCTTCGAGTCCAGCCGTCAGTTTAATTGCCATGCGGAAGCACTTGATGCGCGCCAGCTGCATCCTGCGACCGGTGCTCTGATCCCGCATTTGTCTCTGTCATTGCCTTCGGCTCCGCCCGCTCCAGCACTCTTATGAGCCATGCTGGCAGCACTACCAGCCTGCACCAACTCCACATGAAAAgtctccctctctttctttcaAAAACCTGCACACACATATGTCCTTCAAATCAAGCTTTCAGGATGACAGGGTATGCCAGGGTTATTATAGTTCAGTATTTTAAACGAGATTTTATTTCAGTGTTGTTATGACATTTGCTTTATATTTCAGTTGAGTGTTGACTAGTGTCGTTGATGTTTTTAAGTTAGTAAGTCAATTTTTTCTGTTCTGCAGGAGAAAAAAGCTGGTTTGGATGATGTGATGgagACAAAAGAAACAGCGCAGGGAAATTAGTGGAAGTTTGAGAGAAGGGAGGATGCGGGCGACGTGTTGGTGTGCCGTGTTTCTCATCACTCCGGCGGTCTACCTGGTTTCAAGTGCCCACGCTTCTGTCCCGGGGAAGTCGGAGCTGCTCAAATCAGGAAGCCCCAAGTCAACGCTAAAGCATATATGGACAGAAAGCAGTAAGGACTTGTCCATCAGTCGACTTCTGTCACAGACTCTCCATGGGAAGGAAAATGCAACAGCCCTGGATCTGCACTATGACACTCCAGAGCCTTACTCGGAGCAGGACCTGTGGGACTGGCTGAGGAATACCACGGACCCGCAGGACTCCAGGCCCCGAGCTAAACGGCGGCCAATGGTCAAGACGGGCAAGTTCAAGAAAATGTTTGGCTGGGGAGATTTCCACTCCAACATCAAAACAGTCAAGCTCAACCTCCTGATCACCGGCAAGATCGTCGATCACGGTAACGGCACCTTCAGCGTCTACTTCCGCCATAACTCCACGGGCCAAGGCAACGTGTCCGTCAGCCTGGTCCCGCCCACCAAAATCGTTGAGTTTGACTTGACAGCCCAGCAGTCGGTCATCGACGCCAAGGATTCCAAGTCCTTCAACTGCCGCATCGAGTACGAGAAGGTGGAGAGGGGTTCCAAGAACACACTCTGCAACTTCGACCCATCCAAGACATGTTTCCAGGAGCAGACGCAAAGCCACGTGTCCTGGCTCTGCTCGAAGCCCTTCAAAGTCATTTGCATTTACATCTCCTTCTACAGCACCGACTACAAGCTAGTGCAGAAAGTTTGCCCAGATTATAACTACCACAGCGATACTCCTTACTTCCCCTCTGGCTGAAGGTAGTCGTTGATCCATATGAAGGACAACAAGAGGCAAAGGATGGAGCTCTCTCCCCATCCACAACAAATACACGTTCCCTGTACTGTCCATACCATGCGTCCAAGGCCTGGATCTATTCAAATGAAGAGAAGAATTTGGCTATTTGCACAAGTACCACATACAAACTCTCCTTAGTTTGATCACATGGAATCCCTCAAGTTATGTTGTTGattaatttattctttattttttttaatgttcttagCATATTGTTTTACCACCAAGGTGTGCTTTTTTGACCATGTAAACTCCCAGTTTCTGTCTTGTGTTGTTCTGTTATACTTTAGAGATGTGTAAGTAATTGATttctcttattattttatttttaattagtttatttttatgagTATGTTTCATAGAACTGCCAGAAGGCCACAAGGGTGTAGATATAGTTGGAATTTTTTCGTTTAGATGGTAGAAGCAATGGCGGAGGAGAATTACCCACAATCAGAATCACAATGTTCCCTCCACCTACAAACTTTTCAGCCCTGAAGTCCCCACATGTTATTCCTCCCAGCCCCAAAGGCCCAAAGATGAGGAGAATGGCTTTGTTCTGCTGGTTATGAGCAGGCCTTAACTACAGGCATGTTTTCTACCTATCTTGAAGAAGCTGTACTGTAATAATTGCGGATTGTTCGGCCCGAGCTGTCTCCTGTAGTTTAATAAGATCCAGAAATGGATGGAGGGCTTGCTCATTGTCACTTATAATACACTGTAATGTAATGAATTCTGTATCTTAGAGCCTAATTTGTATGAATGGTTTGTATTGTACATAGTTGATCCTGATGGAGCTGCTTCTGTATATGCCTTCATTCATTGTCTGTTAACCCAAACCCCCACACTCTCTACCAGAAAACCCTATCCCATATATGCTTGTTCTCAGTTCCTCGAACAAAGAAACTGATGTTGCTGATGTAGATGTGAACTCCATGAAACTCCATGCTCTTGTACAGGGGCTGTAAAACTGTCAGAAATATATATTAGAAGTACTTATCATCTGTATGATCATGTTTACTTTCAGGGGGAACGAGGGAATGGAGatgtacaaattaataaaatactgaaAGTTTTATCAGGTGAAGTCTGTTATTGTCCGTTATTCAGAATCTGCTCTAAgctgcatcattcattcattttccttcagcttggtcactttatcaagggtcaccacaacagaatgaagcgccaacttatatagcatatgttttacacagtggatgcccttccagctgcaacccaatactgggaaatatccatacacactcattcacacttatacactatggacaatttagtttatacaatgcatgtctttggactgggggaaaccggagcacctggaggaaactcacatgaacacagggagaacatgaaaacttaaCATACtgtagaaatgccaactggcccagctgggactttaaccagcaaccttcttgttgtgcggcgacagtgctaaccactgagccaccatgtcgccatgAGCTGCATCAATTTTAcataatttacagttttatttcaTGACATAATTTGCCAAACATTCGGAAGGTGTGTGCTAAACACATTTCCAGCAACTATACAGAACATTAACACATCTATGAAGAGGAAAAAACAGGTAAATATATTCTTG
>TCONS_00028252
AAAAACTTCATTGATTTCGCTCATGAAACTTCTTGAAACTTTCTCAAAAGGCCCATGCTGAAACGAACAACTTGAGAGCATACTGAAATCAAAAAAACATTTGCCGTCTTGAGCAGTGAGACATTTGTCATTGTTTAAATAGTCGAGTTTGTAATTCACCATAATCGGAGTCATTAACCCTCCTGATTGTGTGCGGCTTTCTGAGATGCAGATGCGCTGGACTTTGTGTACGAGTATCGGTCTGGCCGCGTCTTCGAGTCCAGCCGTCAGTTTAATTGCCATGCGGAAGCACTTGATGCGCGCCAGCTGCATCCTGCGACCGGTGCTCTGATCCCGCATTTGTCTCTGTCATTGCCTTCGGCTCCGCCCGCTCCAGCACTCTTATGAGCCATGCTGGCAGCACTACCAGCCTGCACCAACTCCACATGAAAAgtctccctctctttctttcaAAAACCTGCACACACATATGTCCTTCAAATCAAGCTTTCAGGATGACAGGGAGAAAAAAGCTGGTTTGGATGATGTGATGgagACAAAAGAAACAGCGCAGGGAAATTAGTGGAAGTTTGAGAGAAGGGAGGATGCGGGCGACGTGTTGGTGTGCCGTGTTTCTCATCACTCCGGCGGTCTACCTGGTTTCAAGTGCCCACGCTTCTGTCCCGGGGAAGTCGGAGCTGCTCAAATCAGGAAGCCCCAAGTCAACGCTAAAGCATATATGGACAGAAAGCAGTAAGGACTTGTCCATCAGTCGACTTCTGTCACAGACTCTCCATGGGAAGGAAAATGCAACAGCCCTGGATCTGCACTATGACACTCCAGAGCCTTACTCGGAGCAGGACCTGTGGGACTGGCTGAGGAATACCACGGACCCGCAGGACTCCAGGCCCCGAGCTAAACGGCGGCCAATGGTCAAGACGGGCAAGTTCAAGAAAATGTTTGGCTGGGGAGATTTCCACTCCAACATCAAAACAGTCAAGCTCAACCTCCTGATCACCGGCAAGATCGTCGATCACGGTAACGGCACCTTCAGCGTCTACTTCCGCCATAACTCCACGGGCCAAGGCAACGTGTCCGTCAGCCTGGTCCCGCCCACCAAAATCGTTGAGTTTGACTTGACAGCCCAGCAGTCGGTCATCGACGCCAAGGATTCCAAGTCCTTCAACTGCCGCATCGAGTACGAGAAGGTGGAGAGGGGTTCCAAGAACACACTCTGCAACTTCGACCCATCCAAGACATGTTTCCAGGAGCAGACGCAAAGCCACGTGTCCTGGCTCTGCTCGAAGCCCTTCAAAGTCATTTGCATTTACATCTCCTTCTACAGCACCGACTACAAGCTAGTGCAGAAAGTTTGCCCAGATTATAACTACCACAGCGATACTCCTTACTTCCCCTCTGGCTGAAGGTAGTCGTTGATCCATATGAAGGACAACAAGAGGCAAAGGATGGAGCTCTCTCCCCATCCACAACAAATACACGTTCCCTGTACTGTCCATACCATGCGTCCAAGGCCTGGATCTATTCAAATGAAGAGAAGAATTTGGCTATTTGCACAAGTACCACATACAAACTCTCCTTAGTTTGATCACATGGAATCCCTCAAGTTATGTTGTTGattaatttattctttattttttttaatgttcttagCATATTGTTTTACCACCAAGGTGTGCTTTTTTGACCATGTAAACTCCCAGTTTCTGTCTTGTGTTGTTCTGTTATACTTTAGAGATGTGTAAGTAATTGATttctcttattattttatttttaattagtttatttttatgagTATGTTTCATAGAACTGCCAGAAGGCCACAAGGGTGTAGATATAGTTGGAATTTTTTCGTTTAGATGGTAGAAGCAATGGCGGAGGAGAATTACCCACAATCAGAATCACAATGTTCCCTCCACCTACAAACTTTTCAGCCCTGAAGTCCCCACATGTTATTCCTCCCAGCCCCAAAGGCCCAAAGATGAGGAGAATGGCTTTGTTCTGCTGGTTATGAGCAGGCCTTAACTACAGGCATGTTTTCTACCTATCTTGAAGAAGCTGTACTGTAATAATTGCGGATTGTTCGGCCCGAGCTGTCTCCTGTAGTTTAATAAGATCCAGAAATGGATGGAGGGCTTGCTCATTGTCACTTATAATACACTGTAATGTAATGAATTCTGTATCTTAGAGCCTAATTTGTATGAATGGTTTGTATTGTACATAGTTGATCCTGATGGAGCTGCTTCTGTATATGCCTTCATTCATTGTCTGTTAACCCAAACCCCCACACTCTCTACCAGAAAACCCTATCCCATATATGCTTGTTCTCAGTTCCTCGAACAAAGAAACTGATGTTGCTGATGTAGATGTGAACTCCATGAAACTCCATGCTCTTGTACAGGGGCTGTAAAACTGTCAGAAATATATATTAGAAGTACTTATCATCTGTATGATCATGTTTACTTTCAGGGGGAACGAGGGAATGGAGatgtacaaattaataaaatactgaaAGTTTTATCAGGTGAAGTCTGTTATTGTCCGTTATTCAGAATCTGCTCTAAgctgcatcattcattcattttccttcagcttggtcactttatcaagggtcaccacaacagaatgaagcgccaacttatatagcatatgttttacacagtggatgcccttccagctgcaacccaatactgggaaatatccatacacactcattcacacttatacactatggacaatttagtttatacaatgcatgtctttggactgggggaaaccggagcacctggaggaaactcacatgaacacagggagaacatgaaaacttaaCATACtgtagaaatgccaactggcccagctgggactttaaccagcaaccttcttgttgtgcggcgacagtgctaaccactgagccaccatgtcgccatgAGCTGCATCAATTTTAcataatttacagttttatttcaTGACATAATTTGCCAAACATTCGGAAGGTGTGTGCTAAACACATTTCCAGCAACTATACAGAACATTAACACATCTATGAAGAGGAAAAAACAGGTAAATATATTCTTG
>TCONS_00028254
GCGCGCCTGAAAAGCCTCTGTCCTTGTTTCTAAGAGGACTTACGCCGCAGTCACTCCAGGCAGAAAGACCAGCGAGCATCTCCCATGACATCTTAATGAAATATGACTGTGCTTCACTCCTTCACTGGATTAATGCCTATTTAAGCGTGCATTCGCGCTCTCCCTCCCTTATCTGTGTCCAAGTTTAAAGCCTATTCTGTGGTCATGGGGTCTATAATGTCATTTTTGCCTAGGCTAAAGGTCTAAAGCGGATACCAAGTGGATCTATGTTCCTTACAGACAAAAGAAACAGCGCAGGGAAATTAGTGGAAGTTTGAGAGAAGGGAGGATGCGGGCGACGTGTTGGTGTGCCGTGTTTCTCATCACTCCGGCGGTCTACCTGGTTTCAAGTGCCCACGCTTCTGTCCCGGGGAAGTCGGAGCTGCTCAAATCAGGAAGCCCCAAGTCAACGCTAAAGCATATATGGACAGAAAGCAGTAAGGACTTGTCCATCAGTCGACTTCTGTCACAGACTCTCCATGGGAAGGAAAATGCAACAGCCCTGGATCTGCACTATGACACTCCAGAGCCTTACTCGGAGCAGGACCTGTGGGACTGGCTGAGGAATACCACGGACCCGCAGGACTCCAGGCCCCGAGCTAAACGGCGGCCAATGGTCAAGACGGGCAAGTTCAAGAAAATGTTTGGCTGGGGAGATTTCCACTCCAACATCAAAACAGTCAAGCTCAACCTCCTGATCACCGGCAAGATCGTCGATCACGGTAACGGCACCTTCAGCGTCTACTTCCGCCATAACTCCACGGGCCAAGGCAACGTGTCCGTCAGCCTGGTCCCGCCCACCAAAATCGTTGAGTTTGACTTGACAGCCCAGCAGTCGGTCATCGACGCCAAGGATTCCAAGTCCTTCAACTGCCGCATCGAGTACGAGAAGGTGGAGAGGGGTTCCAAGAACACACTCTGCAACTTCGACCCATCCAAGACATGTTTCCAGGAGCAGACGCAAAGCCACGTGTCCTGGCTCTGCTCGAAGCCCTTCAAAGTCATTTGCATTTACATCTCCTTCTACAGCACCGACTACAAGCTAGTGCAGAAAGTTTGCCCAGATTATAACTACCACAGCGATACTCCTTACTTCCCCTCTGGCTGAAGGTAGTCGTTGATCCATATGAAGGACAACAAGAGGCAAAGGATGGAGCTCTCTCCCCATCCACAACAAATACACGTTCCCTGTACTGTCCATACCATGCGTCCAAGGCCTGGATCTATTCAAATGAAGAGAAGAATTTGGCTATTTGCACAAGTACCACATACAAACTCTCCTTAGTTTGATCACATGGAATCCCTCAAGTTATGTTGTTGattaatttattctttattttttttaatgttcttagCATATTGTTTTACCACCAAGGTGTGCTTTTTTGACCATGTAAACTCCCAGTTTCTGTCTTGTGTTGTTCTGTTATACTTTAGAGATGTGTAAGTAATTGATttctcttattattttatttttaattagtttatttttatgagTATGTTTCATAGAACTGCCAGAAGGCCACAAGGGTGTAGATATAGTTGGAATTTTTTCGTTTAGATGGTAGAAGCAATGGCGGAGGAGAATTACCCACAATCAGAATCACAATGTTCCCTCCACCTACAAACTTTTCAGCCCTGAAGTCCCCACATGTTATTCCTCCCAGCCCCAAAGGCCCAAAGATGAGGAGAATGGCTTTGTTCTGCTGGTTATGAGCAGGCCTTAACTACAGGCATGTTTTCTACCTATCTTGAAGAAGCTGTACTGTAATAATTGCGGATTGTTCGGCCCGAGCTGTCTCCTGTAGTTTAATAAGATCCAGAAATGGATGGAGGGCTTGCTCATTGTCACTTATAATACACTGTAATGTAATGAATTCTGTATCTTAGAGCCTAATTTGTATGAATGGTTTGTATTGTACATAGTTGATCCTGATGGAGCTGCTTCTGTATATGCCTTCATTCATTGTCTGTTAACCCAAACCCCCACACTCTCTACCAGAAAACCCTATCCCATATATGCTTGTTCTCAGTTCCTCGAACAAAGAAACTGATGTTGCTGATGTAGATGTGAACTCCATGAAACTCCATGCTCTTGTACAGGGGCTGTAAAACTGTCAGAAATATATATTAGAAGTACTTATCATCTGTATGATCATGTTTACTTTCAGGGGGAACGAGGGAATGGAGatgtacaaattaataaaatactgaaAGTTTTATCAGG
>TCONS_00028255
TGCCCACGCTTCTGTCCCGGGGAAGTCGGAGCTGCTCAAATCAGGAAGCCCCAAGTCAACGCTAAAGCATATATGGACAGAAAGCAGTAAGGACTTGTCCATCAGTCGACTTCTGTCACAGACTCTCCATGGGAAGGAAAATGCAACAGCCCTGGATCTGCACTATGACACTCCAGAGCCTTACTCGGAGCAGGACCTGTGGGACTGGCTGAGGAATACCACGGACCCGCAGGACTCCAGGCCCCGAGCTAAACGGCGGCCAATGGTCAAGACGGGCAAGTTCAAGAAAATGTTTGGCTGGGGAGATTTCCACTCCAACATCAAAACAGTCAAGCTCAACCTCCTGATCACCGGCAAGATCGTCGATCACGGTAACGGCACCTTCAGCGTCTACTTCCGCCATAACTCCACGGGCCAAGGCAACGTGTCCGTCAGCCTGGTCCCGCCCACCAAAATCGTTGAGTTTGACTTGACAGCCCAGCAGTCGGTCATCGACGCCAAGGATTCCAAGTCCTTCAACTGCCGCATCGAGTACGAGAAGGTGGAGAGGGGTTCCAAGAACACACTCTGCAACTTCGACCCATCCAAGACATGTTTCCAGGAGCAGACGCAAAGCCACGTGTCCTGGCTCTGCTCGAAGCCCTTCAAAGTCATTTGCATTTACATCTCCTTCTACAGCACCGACTACAAGCTAGTGCAGAAAGTTTGCCCAGATTATAACTACCACAGCGATACTCCTTACTTCCCCTCTGGCTGAAGGTAGTCGTTGATCCATATGAAGGACAACAAGAGGCAAAGGATGGAGCTCTC

Function

symbol description
nxph1 Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Is expressed in brain and spinal cord. Orthologous to human NXPH1 (neurexophilin 1).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0005102 signaling receptor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-231 Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Is expressed in brain and spinal cord. Orthologous to human NXPH1 (neurexophilin 1).

Ensembl:

ensembl_id ENSDARG00000033447

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028253 False 3215 mRNA 0.44 3 37848830 37928041
TCONS_00028252 False 3072 mRNA 0.45 4 37848830 37928041
TCONS_00028254 False 2266 mRNA 0.45 2 37857936 37927491
TCONS_00028255 True 810 mRNA 0.53 1 37925616 37926425

Neighbor

gene id symbol gene type direction distance location
XLOC_014205 thsd7aa coding upstream 6827 37620342 ~ 37842003 (+)
XLOC_014206 CR627498.1 coding upstream 179056 37669660 ~ 37669774 (+)
XLOC_014204 NA coding upstream 278154 37569661 ~ 37570676 (+)
XLOC_014203 si:ch211-250g4.3 coding upstream 329220 37509638 ~ 37519610 (+)
XLOC_014202 NA coding upstream 350151 37494319 ~ 37498679 (+)
XLOC_014208 NA coding downstream 9766 37937807 ~ 37948286 (+)
XLOC_014209 NA coding downstream 89558 38017599 ~ 38020095 (+)
XLOC_014210 phf14 coding downstream 239427 38167468 ~ 38327733 (+)
XLOC_014211 BX530058.2 coding downstream 328235 38256276 ~ 38256392 (+)
XLOC_014212 NA coding downstream 450358 38378399 ~ 38384624 (+)
XLOC_014197 CABZ01036526.1 non-coding upstream 1168623 36680091 ~ 36680207 (+)
XLOC_014196 NA non-coding upstream 1221196 36625129 ~ 36627634 (+)
XLOC_014214 NA non-coding downstream 545399 38473440 ~ 38475865 (+)

Expression


Co-expression Network