XLOC_014214


Basic Information

Item Value
gene id XLOC_014214
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 38473440 ~ 38475865 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030013
ataaacttcacatctGTAAACTCCATACCATTAATGCCATTTCAAGTATTTCAGTTCGTTCATCCATTATGAAAGCAAAATTTCATTATTGTTACAAACTGAAGATTTGGAGTTGAGAGACCAGCAAGAGAACAAGCCAGTAGGACTTTGCTTTCAAAACCTTTATTGGTTCTCTTAAGTTTCTTCAAACAGAATTTGCACACAAATGACTTTATTTATAAAAGCGCTGTGGTGAGATGCATGACGATGGGGGGGAGATTCTTTAAAAATTGGAATGTTAAAAGATTGAAAGCCAATCTGAAATCGGCATGCTCGTAACGTTCATGAAAGCTGCATAATTTGACAATTGTAAATGGCTCTGCGTAAAACTTTTCAGCTATCCTCCTAATACAGATTGAGATTCATTCTCTCCATCCttgcgcacactcacacacacacatacagaccgaGGGAGTGACAATGAGAGGATAAAGTGCAAAGTGTAAAAGCATCAGACTGGCTGACGCAGCAGAGGATCAGAGATGCCGTTTGCTTTAAAGATGACTGAATGTTGGGGATCTGCTGTGTTTTAGGATGACTAGCAAAGCATATTTGAGATATTCTAGAAGCACACGATGGTTCAGCTGCAAGTGGTACAGTATATCAAATGTCAATTCAAGTTTAAGAGTCCAGAGTGGTGGAGGAGGAGATGTCGTCACAGAGCTCATCAAGAGATTGGTGTCGATGaaaaaaaagtcttacaaaaataaaatctcaTTCCATCCCAAATTGCAAATCGCATATAAACCTACCTTTACAAAGCAACCGAGCTTACAACATTGTtccaaaatataaaacaacaataGAAAGGGCTGCCATGCCGATGTCAATTTTTTAAGTACAAAAAGCCattacatataaatatgaatatgtacAACACAAGCCCTTTGGGGAGTTCATTTTGAataattaacataatttattaggGCAACTGCATCTATGCCTAATGGTAGTCTTAGCCTATTTTATATGCAGCGGCTCACACTGTAAAAGGACAGGAGTAAGATGGATATTTATGCCACATGTCTTTACCAAAGCACTAAAATACTGAAACTAGCAGCTGCCAAAACAATCCCCTCACGAAAAAATATAGTTAAACGAATATTTTGGATTTAATACAAGCACTACCAACAGCATCACTGGCATGAAGTCAATCTCAGTGGAAAATCATTTTCACTCGTACCTAATTTTatactaaattaaaaagaaaaatccgTATACACTTAGCCCATGGAGTTCCACTATAATTTATGCCAAAATAATTCCTGCTTTAACAAACGGCATGCTGTAGATGATTTTAACTTGCATTTAACTCAAGGATATTGCTTTAATAGATAACAAATGGCCTTGATGTGACATTGAGAAACTAATATCCTGTGGGGGGTTAGTAAGAAATTAAAAATGCTGAATTCTGAATAAATCTGGAAATTAATAACAACTGTCAAAGCCTTATATGTCCAGGAATCTAGAGGTCTTCAATTTACTGCAACAGTAAAAGCACCATCTCTACTGCAAGTGTAGCATTACTCAGAGGTTAAGGCACTCAGGTTTGGAATGTGGCACTTATTGTAGTGGTGTTAATGCCAGACTATATTAAATTCCCCATTGGTGGAGAACCAGTGTTTTGGCTTTGCGGAACGGAAATGCACATCAATCCTTTGGTTCTCCGTGGAGCCTTAGAGCAGGTGCAGGTAGGTAATTGTGTGAATGTTAATATTTGGGTACCATCCTCCAGCTTTTACTTCTCTTAAAATCTCTTTTAGTACATGGGACCTTTGGGAGGTGGACCCTTGGGATTGTATTCCATAGGCATACTCATACAGTCCGATGGATGACAGCGGCCATCCTTGCCCTTCTGTCCTGATGGTCCTGGAGGTCCAGGAATGCCAGGGACTCCCTGTTGACCAGAAGGACCTGGTGGTCCCATCTTTCCATAACCAGGAGGACCAGGGAGACCTGAGAGGGAAATGAGAAAATAATTACAGACCACCTGGGGACACATTTGAGAGCATCCATGTGGAAGACTGGACAAATGGAAATATGGATCGCTGTGGGATACAGGAGCACATTAGTTCCCCTTACCGGGCGGACCCATGGGTCCCTGCCTTCCTTCACGCCCAATCTGCCCAGGACGGCCTGGCATCCCTGCAGGACCTGGAAGGCCTGGATTTCCATCTTTACCCGGGGGTCCCGGTCGTCCGGGGGATGCAACCATCTCCACAGGCATCTGCATTCGTGACATGTAGTAACCCATGCGCTCTGTAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0048869 cellular developmental process biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0005515 protein binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030013 True 2304 lncRNA 0.41 2 38473440 38475865

Neighbor

gene id symbol gene type direction distance location
XLOC_014213 col9a2 coding upstream 5840 38422059 ~ 38467600 (+)
XLOC_014212 NA coding upstream 88816 38378399 ~ 38384624 (+)
XLOC_014210 phf14 coding upstream 145707 38167468 ~ 38327733 (+)
XLOC_014211 BX530058.2 coding upstream 217048 38256276 ~ 38256392 (+)
XLOC_014209 NA coding upstream 453345 38017599 ~ 38020095 (+)
XLOC_014215 NA coding downstream 257229 38733094 ~ 38778761 (+)
XLOC_014216 CABZ01045414.1 coding downstream 471764 38947629 ~ 38959047 (+)
XLOC_014217 CABZ01045413.1 coding downstream 472707 38948572 ~ 38948686 (+)
XLOC_014218 CT737129.1 coding downstream 800108 39275973 ~ 39293345 (+)
XLOC_014219 NA coding downstream 933458 39409323 ~ 39415701 (+)
XLOC_014208 NA non-coding upstream 525154 37937807 ~ 37948286 (+)
XLOC_014206 CR627498.1 non-coding upstream 803666 37669660 ~ 37669774 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G231353 NA non-coding CI01000054 null 3914849 ~ 3916392 (+)