XLOC_014216 (CABZ01045414.1)


Basic Information

Item Value
gene id XLOC_014216
gene name CABZ01045414.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 38947629 ~ 38959047 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028263
GTAAGCCAGAAAAGGAAGTGCAGAAGTACATTCTAGGCTTTGAAGCAGAAACATCATTGATCTGGGTCTGGAGCAAAGCGAAAGCAGTTTGAAGATATCGACAACCGCCTTAATCTACTTCCCATCTACAGTCTACCAAGCTGGGAGCATAACAAAGTGAAAACAACTTCTCCCTTACTGAATTAACTAGCAGAGTGCTTGTTTTGCGGTCGAACGTCAGAAGACGAACTGTTGACTGTCTAATAACAGTACAGCGGGTGCAGACAATGGCAATCAAAGCTAATTAAGCATTGTCTGATTATAATGAGGGGTTAGTGGACAGGTTAACAGCGCAATCAACCCCATCAAGTATTGCCTCGGTCGAGAGACAGAATTAAAACCCACTCAGCATTATGAACTCAAAGGCAAAGGTCGCGGCTGGGGAATTAAGAAGAGCACACTGAGGTAAGGCTGTTGAATGTGTTAGAAAGCAATCGATCATTAGCAAAATACCCTGGTCTGACAacagactttttttctttttgttttttttacttttatgcaCTTATGGTAAGGACTAGTTCAAAGTGGCATAAGTGAGTTTGGTTTTCTTCATGTGTGTTTTATTCTTCATGAGTTGAAACAGTGctgaaattgacttttttttaaacatttgttaatGCGTGGTCATTGCAGTTATTTTTACTTAAGGCTGCTGAATGTATTAGAAAGCAATCAATCAATAGCAAAACATCCTGCTCTGAAAACAGACAAAAAACAGActttttcttttcgttttttACTTTTAGGCACTTATGGAGAGGACTACTTAAAAGTGGTGTAGAAGCTGAAGCTCTCTTCCACGTCATGGCTACTTGGTACTCATCTTTACATATTTCATGAGGCGCTGCACACGGAGCGAACTTCCTCTCCAGAGCCATCGCATGGATAACCCTGGATCCCTGTGCCTTCACACATGCGGAAGCGCCGCTGCCAGCCCGAGTCACAGGTCTTCGAGCACAGGCTCCAGTGATTCCACGCACCCCAGTTCCCTCCACCTGCAAAGAGGAACAGGAGATAAATACGAGGAGGAGAAACAGCCAGAATACTGCAACGATTCGAGGAGGCTTATCAATGGCCATCCACACACTGGAGGATTGATTTAATAAGAGAACAATCTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117548

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028263 True 1160 lncRNA 0.43 3 38947629 38959047

Neighbor

gene id symbol gene type direction distance location
XLOC_014215 NA coding upstream 168868 38733094 ~ 38778761 (+)
XLOC_014214 NA coding upstream 471764 38473440 ~ 38475865 (+)
XLOC_014213 col9a2 coding upstream 480029 38422059 ~ 38467600 (+)
XLOC_014212 NA coding upstream 563005 38378399 ~ 38384624 (+)
XLOC_014210 phf14 coding upstream 619896 38167468 ~ 38327733 (+)
XLOC_014218 CT737129.1 coding downstream 316926 39275973 ~ 39293345 (+)
XLOC_014219 NA coding downstream 450276 39409323 ~ 39415701 (+)
XLOC_014220 NA coding downstream 791011 39750058 ~ 39752174 (+)
XLOC_014221 BX957260.2 coding downstream 915784 39874831 ~ 39874947 (+)
XLOC_014222 BX957260.1 coding downstream 968359 39927406 ~ 39969458 (+)
XLOC_014211 BX530058.2 non-coding upstream 691237 38256276 ~ 38256392 (+)
XLOC_014209 NA non-coding upstream 927534 38017599 ~ 38020095 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_03558982_03663042 ADGRB2 coding CI01000054 null 3558982 ~ 3663042 (+)