XLOC_014278 (pum1)


Basic Information

Item Value
gene id XLOC_014278
gene name pum1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43037657 ~ 43090728 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028373
CTTGCATCGAGCCGCCATGTTGTTGGTGTGAAAGCCAGAGAGCTGCAGCGACCCGGGGCTGAAATCCGTCACCATCCGCATCCTCCACCTTCTCTGGTGGAATGAGCGTAGCGTGTGTGTTGAAGAGGAAAGCTGTGCTCTGGCAGGATTCGTTCAGCCCCCACCTGAGACTGCCTCCCCCTGACAGGCCATTACCCAGCATGCCTGTGGTGCTGAGTGCTGCGGGCCACACCCCTCAACCCGGCCCTTCTCCTCAGGCCCCTGCCCCGACACAGGGAGCCGGACGATCGCAAGATGACGCAATGGTGGATTATTTCTTTCAGCGGCAGCACGGGGACCAGCCCGGATACAACAACTGCAAACACCGCTGGCCGACCGGCGACAATATTCATGCAGACAACCAGGTACGATCCATGGATGAGCTAAATCATGACTTCCAGGCACTGGCACTGGAGGGTCGGGCCATGGGAGAGCAGCTCCTTACTGGGAAGAAGTTTTGGGAAACTGATGATTCAGGGAAAGATGGACCAAAAGGGATCTTTCTGGACCAGTGGAGAGACAGCGCTTGGGGAGCCtctgATCACTCAGTGTCTCAGCCAATCATGGTGCAGCGCCGACCGGGTCAGGGCTTCCACGGAGTGGGAGAGGCGGGATCTGTGCTGTCGCCGCGGTCCGAGAGCGGTGGGTTAGGGGTTTCCATGGTGGAGTATGTGCTCAGCTCCTCACCTGCTGAGAAGATGGACTCGTGTCTGCGCAAAGGAGCCTATGGTCCAAGAGATTCAGAGGCTGATGACCCTGAGAAAAGGGTGGAACAAAAACCCAAGACAACGTTTGACCCCGAACGAAAGGAACTGAAGGAGACCGAACCAGATGTTTTGGATAATCCTAATGGACTGCCCAATCAGAATGGACTTGATGTGGATGTTAAAGATTTTAGTCGGACCCCTGGAAATTGCCCTCCAACTGGTCAAGAGGTGGAGTTGGGAGGACCAGAGATGGTAGGAGGTGCAGGGCCGAAACCAGCCGAGGAGTTTTCAAATGTTGAAACccaaaatgtgaccctggaccccATGGAGTCAGTGTCTATGGAGACTTTGCAGTTCGAGTACCCTGGAGGACAGTTGCCGCTTGACTCCACAGCTGCTACCGTCGGCCTGTTTGACTACAACTCCCCTCAGCAGCTGTTCCAGAGACCCAATGCTCTGGCAGTCCAGCAGCTGACCGCAGCCCAGCAGCAGCAGTACGCGCTCGCCGCAGCCCAACAGCCACACATTGGTTTGGCTCCAGCTGCATTTGTACCGAATCCGTACATCATCAGCGCTGCTCCGCCCGGCACCGACCCGTATGCTGCAGGACTCGCTGCTGCCGCCACTCTAGGCCCAGCGGTGATGCCCCCTCAGTACTATGGAGTGACTCCATGGGGAGTGTATCCTGCCAACCTGTTCCAGCAGCAGGCTGCCACGCCATCCAACTCGGCCAACCAGCAGTCAGCAGCGCAGAACCAGCAGAACCAACAGCAGGTGATGCGTGCAGGTGGAAACCAGCGACCTCTCACTCCAAGTCAAGGACAGCAGGGTCAGCAGACGGAGCAGCTCGTAGCGGCAGCAGCTGTGAACTCGGCATTGGCTTTTGGGCAGGGTCTGGCAGCAGGTGTACCAGGTTATCCAGTGTTGGCTCCTGCTGCATATTATGACCAGACAGGTGCACTTGTGGTGAATACAGGAGCTCGTGGAGGACCCGTTCGACTTATGGCCCCCGCATCAGTAATCATCAGCCCATCAGCCGCagTGGCTGCTGCCGCCGCTTCAGCAGGAGGGGCGAATGCAGGTCTCGGTGGTGGAGCCAGCGGTGCGTTTCGTGCATTGAGTTCCCAGCAGGCTCCTGGGCAGCAAGGGAGCGGGGCTTTGGGAGGAAGCTCTTTTTATGGGAGCGGATCTCCGAGCTCCTCTTCACAGAGCTCCTCCCTGTTCTCCCAAGGCTCCGCTCAGCCGGGAAACACCTCACTCGGATTCAATGCCAACCCAACATCATCTCTCGGAGCCACGCTTGGAGCAGCACTCGGGGGTTTTGGCACGGCAGtgGCTAATTCCAGTTCCAGCGGGTCTCGTCGGGATTCTCTGACGGGCAGCTCTGATCTGTACAAGCGGACAGCCAGCAGCCTCACTCCTATTGGCCATGGAGCCTTTTACAACGGCCTCAGCTTTAGCTCCTCCCCTGGTCCGGTTGGCATGCCGCTTCCAAACCAAGGCCCCTCCCACTCTCTCACCCCACCACCCTCGCTCTCAACTCATGGATCCTCAAGCAGTCTTAATCTTGGTGGACTGACCAATGGCAGTGGGCGCTTCATCTCAGCAGCTCCTGGAGCGGAGGCGAAGTACCGCAGCGCCACCACCGGCTCGTCTCTCTTCAGTCCCAGCAGTCAGCTCTTCCCCTCGTCACGGCTGCGCTACGGGATGTCTGACGTGATGCCGTCGGGACGCAGCCGTCTGCTGGAGGACTTCAGAAACAACCGCTACCCCAACCTGCAGCTGAGAGAGATCGCAGGACACGTCATGGAGTTCTCTCAGGACCAGCACGGCTCCAGGTTTATTCAGCTGAAATTGGAGAGAGCAAGTCCTGCAGAGCGTCAGCTGGTCTTCAATGAGATCCTGCAGGCCGCCTACCAGCTCATGGTTGATGTGTTTGGAAATTATGTCATCCAGAAGTTCTTTGAGTTTGGCAGTCTGGACCAGAAGCTGGCGCTGGCCGAGCGGATTCGTGGTCATGTGTTATCCCTGGCGCTGCAGATGTACGGCTGCAGAGTCATTCAGAAAGCCCTGGAGTTCATCCCCTCCGACCAGCAAGTCATTAATGAGATGGTTCGGGAGCTCGACGGACACGTGTTAAAGTGTGTGAAGGATCAAAACGGCAATCATGTGGTGCagaaatgcattgagtgtgttcaGCCTCATGCTCTTCAGTTCATCATTGATGCCTTCAAAGGACAGGTGTTTGCTCTGTCCACACACCCATATGGCTGTCGGGTGATCCAGCGTATTCTGGAGCACTGCCTGCCCGAGCAGACTTTATCCATCCTGGAGGAAATCCATCAGCACACCGAGCAGCTGGTGCAGGATCAGTATGGGAATTATGTAATCCAGCACGTGTTGGAGCACGGCCGCGCTGAGGACAAGAGCAAGATTGTATCTGAAATCCGAGGAAATGTTTTGGGGCTCAGCCAGCATAAGTTTGCCAGtAATGTGGTGGAGAAGTGTGTGACCCACTCTCTGCGTGCCGAACGGGCCATGCTGATCGATGAGGTGTGCAGTATGGCGGACGGGCCACACAGTGCCTTATACACCATGATGAAGGACCAGTACGCAAACTATGTTGTGCAGAAGATGATCGATGTGGCCGAGCCAACACAACGAAAGATTGTAATGCACAAGATCCGGCCCCATATTGCGACGCTGAGGAAGTACACGTACGGAAAGCACATTTTGGCCAAGCTGGAGAAGTACTACATGAAGAACGGTGTTGACCTGGGCCCGCTCTGCGCTCCTCCCAATGGCATCATGTAA
>TCONS_00028374
CTTGCATCGAGCCGCCATGTTGTTGGTGTGAAAGCCAGAGAGCTGCAGCGACCCGGGGCTGAAATCCGTCACCATCCGCATCCTCCACCTTCTCTGGTGGAATGAGCGTAGCGTGTGTGTTGAAGAGGAAAGCTGTGCTCTGGCAGGATTCGTTCAGCCCCCACCTGAGACTGCCTCCCCCTGACAGGCCATTACCCAGCATGCCTGTGGTGCTGAGTGCTGCGGGCCACACCCCTCAACCCGGCCCTTCTCCTCAGGCCCCTGCCCCGACACAGGGAGCCGGACGATCGCAAGATGACGCAATGGTGGATTATTTCTTTCAGCGGCAGCACGGGGACCAGCCCGGATACAACAACTGCAAACACCGCTGGCCGACCGGCGACAATATTCATGCAGACAACCAGGTACGATCCATGGATGAGCTAAATCATGACTTCCAGGCACTGGCACTGGAGGGTCGGGCCATGGGAGAGCAGCTCCTTACTGGGAAGAAGTTTTGGGAAACTGATGATTCAGGGAAAGATGGACCAAAAGGGATCTTTCTGGACCAGTGGAGAGACAGCGCTTGGGGAGCCtctgATCACTCAGTGTCTCAGCCAATCATGGTGCAGCGCCGACCGGGTCAGGGCTTCCACGGAGTGGGAGAGGCGGGATCTGTGCTGTCGCCGCGGTCCGAGAGCGGTGGGTTAGGGGTTTCCATGGTGGAGTATGTGCTCAGCTCCTCACCTGCTGAGAAGATGGACTCGTGTCTGCGCAAAGGAGCCTATGGTCCAAGAGATTCAGAGGCTGATGACCCTGAGAAAAGGGTGGAACAAAAACCCAAGACAACGTTTGACCCCGAACGAAAGGAACTGAAGGAGACCGAACCAGATGTTTTGGATAATCCTAATGGACTGCCCAATCAGAATGGACTTGATGTGGATGTTAAAGATTTTAGTCGGACCCCTGGAAATTGCCCTCCAACTGGTCAAGAGGTGGAGTTGGGAGGACCAGAGATGGTAGGAGGTGCAGGGCCGAAACCAGCCGAGGAGTTTTCAAATGTTGAAACccaaaatgtgaccctggaccccATGGAGTCAGTGTCTATGGAGACTTTGCAGTTCGAGTACCCTGGAGGACAGTTGCCGCTTGACTCCACAGCTGCTACCGTCGGCCTGTTTGACTACAACTCCCCTCAGCAGCTGTTCCAGAGACCCAATGCTCTGGCAGTCCAGCAGCTGACCGCAGCCCAGCAGCAGCAGTACGCGCTCGCCGCAGCCCAACAGCCACACATTGGTTTGGCTCCAGCTGCATTTGTACCGAATCCGTACATCATCAGCGCTGCTCCGCCCGGCACCGACCCGTATGCTGCAGGACTCGCTGCTGCCGCCACTCTAGGCCCAGCGGTGATGCCCCCTCAGTACTATGGAGTGACTCCATGGGGAGTGTATCCTGCCAACCTGTTCCAGCAGCAGGCTGCCACGCCATCCAACTCGGCCAACCAGCAGTCAGCAGCGCAGAACCAGCAGAACCAACAGCAGGTGATGCGTGCAGGTGGAAACCAGCGACCTCTCACTCCAAGTCAAGGACAGCAGGGTCAGCAGACGGAGCAGCTCGTAGCGGCAGCAGCTGTGAACTCGGCATTGGCTTTTGGGCAGGGTCTGGCAGCAGGTGTACCAGGTTATCCAGTGTTGGCTCCTGCTGCATATTATGACCAGATTTGCCATTCTTTTGTCTACTTGTAAGTGTAACATAATGGCCATTTGGTTTTTTGATTTGGAACACTCTCCGGTGTATATTTAAACAGCCTTGTGTATATTTCCTATTCTCTTTATGCAGGCACACTTGTAACCATAATGTGTATAGGTAACAGATGCTGTGTGTGCTTTCTGCCTGGGCAACTATTTTTTGTAACTCCAGTTGTAGATTGTCTCTAAACAATGTGTGATCTTTATtttgaaacaaaacaatgaaaacatttcaaaatttC
>TCONS_00028375
TTGCATCGAGCCGCCATGTTGTTGGTGTGAAAGCCAGAGAGCTGCAGCGACCCGGGGCTGAAATCCGTCACCATCCGCATCCTCCACCTTCTCTGGTGGAATGAGCGTAGCGTGTGTGTTGAAGAGGAAAGCTGTGCTCTGGCAGGATTCGTTCAGCCCCCACCTGAGACTGCCTCCCCCTGACAGGCCATTACCCAGCATGCCTGTGGTGCTGAGTGCTGCGGGCCACACCCCTCAACCCGGCCCTTCTCCTCAGGCCCCTGCCCCGACACAGGGAGCCGGACGATCGCAAGATGACGCAATGGTGGATTATTTCTTTCAGCGGCAGCACGGGGACCAGCCCGGATACAACAACTGCAAACACCGCTGGCCGACCGGCGACAATATTCATGCAGACAACCAGGTACGATCCATGGATGAGCTAAATCATGACTTCCAGGCACTGGCACTGGAGGGTCGGGCCATGGGAGAGCAGCTCCTTACTGGGAAGAAGTTTTGGGAAACTGATGATTCAGGGAAAGATGGACCAAAAGGGATCTTTCTGGACCAGTGGAGAGACAGCGCTTGGGGAGCCtctgATCACTCAGTGTCTCAGCCAATCATGGTGCAGCGCCGACCGGGTCAGGGCTTCCACGGAGTGGGAGAGGCGGGATCTGTGCTGTCGCCGCGGTCCGAGAGCGGTGGGTTAGGGGTTTCCATGGTGGAGTATGTGCTCAGCTCCTCACCTGCTGAGAAGATGGACTCGTGTCTGCGCAAAGGAGCCTATGGTCCAAGAGATTCAGAGGCTGATGACCCTGAGAAAAGGGTGGAACAAAAACCCAAGACAACGTTTGACCCCGAACGAAAGGAACTGAAGGAGACCGAACCAGATGTTTTGGATAATCCTAATGGACTGCCCAATCAGAATGGACTTGATGTGGATGTTAAAGATTTTAGTCGGACCCCTGGAAATTGCCCTCCAACTGGTCAAGAGGTGGAGTTGGGAGGACCAGAGATGGTAGGAGGTGCAGGGCCGAAACCAGCCGAGGAGTTTTCAAATGTTGAAACccaaaatgtgaccctggaccccATGGAGTCAGTGTCTATGGAGACTTTGCAGTTCGAGTACCCTGGAGGACAGTTGCCGCTTGACTCCACAGCTGCTACCGTCGGCCTGTTTGACTACAACTCCCCTCAGCAGCTGTTCCAGAGACCCAATGCTCTGGCAGTCCAGCAGCTGACCGCAGCCCAGCAGCAGCAGTACGCGCTCGCCGCAGCCCAACAGCCACACATTGGTTTGGCTCCAGCTGCATTTGTACCGAATCCGTACATCATCAGCGCTGCTCCGCCCGGCACCGACCCGTATGCTGCAGGACTCGCTGCTGCCGCCACTCTAGGCCCAGCGGTGATGCCCCCTCAGTACTATGGAGTGACTCCATGGGGAGTGTATCCTGCCAACCTGTTCCAGCAGCAGGCTGCCACGCCATCCAACTCGGCCAACCAGCAGTCAGCAGCGCAGAACCAGCAGAACCAACAGCAGGTGATGCGTGCAGGTGGAAACCAGCGACCTCTCACTCCAAGTCAAGGACAGCAGGGTCAGCAGACGGAGCAGCTCGTAGCGGCAGCAGCTGTGAACTCGGCATTGGCTTTTGGGCAGGGTCTGGCAGCAGGTGTACCAGGTTATCCAGTGTTGGCTCCTGCTGCATATTATGACCAGACAGGTGCACTTGTGGTGAATACAGGAGCTCGTGGAGGACCCGTTCGACTTATGGCCCCCGCATCAGTAATCATCAGCCCATCAGCCGCagTGGCTGCTGCCGCCGCTTCAGCAGGAGGGGCGAATGCAGGTCTCGGTGGTGGAGCCAGCGGTGCGTTTCGTGCATTGAGTTCCCAGCAGGCTCCTGGGCAGCAAGGGAGCGGGGCTTTGGGAGGAAGCTCTTTTTATGGGAGCGGATCTCCGAGCTCCTCTTCACAGAGCTCCTCCCTGTTCTCCCAAGGCTCCGCTCAGCCGGGAAACACCTCACTCGGATTCAATGCCAACCCAACATCATCTCTCGGAGCCACGCTTGGAGCAGCACTCGGGGGTTTTGGCACGGCAGtgGCTAATTCCAGTTCCAGCGGGTCTCGTCGGGATTCTCTGACGGGCAGCTCTGATCTGTACAAGCGGACAGCCAGCAGCCTCACTCCTATTGGCCATGGAGCCTTTTACAACGGCCTCAGCTTTAGCTCCTCCCCTGGTCCGGTTGGCATGCCGCTTCCAAACCAAGGCCCCTCCCACTCTCTCACCCCACCACCCTCGCTCTCAACTCATGGATCCTCAAGCAGTCTTAATCTTGGTGGACTGACCAATGGCAGTGGGCGCTTCATCTCAGCAGCTCCTGGAGCGGAGGCGAAGTACCGCAGCGCCACCACCGGCTCGTCTCTCTTCAGTCCCAGCAGTCAGCTCTTCCCCTCGTCACGGCTGCGCTACGGGATGTCTGACGTGATGCCGTCGGGACGCAGCCGTCTGCTGGAGGACTTCAGAAACAACCGCTACCCCAACCTGCAGCTGAGAGAGATCGCAGGACACGTCATGGAGTTCTCTCAGGACCAGCACGGCTCCAGGTTTATTCAGCTGAAATTGGAGAGAGCAAGTCCTGCAGAGCGTCAGCTGGTCTTCAATGAGATCCTGCAGGCCGCCTACCAGCTCATGGTTGATGTGTTTGGAAATTATGTCATCCAGAAGTTCTTTGAGTTTGGCAGTCTGGACCAGAAGCTGGCGCTGGCCGAGCGGATTCGTGGTCATGTGTTATCCCTGGCGCTGCAGATGTACGGCTGCAGAGTCATTCAGAAAGCCCTGGAGTTCATCCCCTCCGACCAGCAAGTCATTAATGAGATGGTTCGGGAGCTCGACGGACACGTGTTAAAGTGTGTGAAGGATCAAAACGGCAATCATGTGGTGCagaaatgcattgagtgtgttcaGCCTCATGCTCTTCAGTTCATCATTGATGCCTTCAAAGGACAGGTGTTTGCTCTGTCCACACACCCATATGGCTGTCGGGTGATCCAGCGTATTCTGGAGCACTGCCTGCCCGAGCAGACTTTATCCATCCTGGAGGAAATCCATCAGCACACCGAGCAGCTGGTGCAGGATCAGTATGGGAATTATGTAATCCAGCACGTGTTGGAGCACGGCCGCGCTGAGGACAAGAGCAAGATTGTATCTGAAATCCGAGGAAATGTTTTGGGGCTCAGCCAGCATAAGTT
>TCONS_00028376
GAGCCGCCATGTTGTTGGTGTGAAAGCCAGAGAGCTGCAGCGACCCGGGGCTGAAATCCGTCACCATCCGCATCCTCCACCTTCTCTGGTGGAATGAGCGTAGCGTGTGTGTTGAAGAGGAAAGCTGTGCTCTGGCAGGATTCGTTCAGCCCCCACCTGAGACTGCCTCCCCCTGACAGCCCAGCAGCAGCAGTACGCGCTCGCCGCAGCCCAACAGCCACACATTGGTTTGGCTCCAGCTGCATTTGTACCGAATCCGTACATCATCAGCGCTGCTCCGCCCGGCACCGACCCGTATGCTGCAGGACTCGCTGCTGCCGCCACTCTAGGCCCAGCGGTGATGCCCCCTCAGTACTATGGAGTGACTCCATGGGGAGTGTATCCTGCCAACCTGTTCCA
>TCONS_00028377
CTCAACTCATGGATCCTCAAGCAGTCTTAATCTTGGTGGACTGACCAATGGCAGTGGGCGCTTCATCTCAGCAGCTCCTGGAGCGGAGGCGAAGTACCGCAGCGCCACCACCGGCTCGTCTCTCTTCAGTCCCAGCAGTCAGCTCTTCCCCTCGTCACGGCTGCGCTACGGGATGTCTGACGTGATGCCGTCGGGACGCAGCCGTCTGCTGGAGGACTTCAGAAACAACCGCTACCCCAACCTGCAGCTGAGAGAGATCGCAGGACACGTCATGGAGTTCTCTCAGGACCAGCACGGCTCCAGGTTTATTCAGCTGAAATTGGAGAGAGCAAGTCCTGCAGAGCGTCAGCTGGTCTTCAATGAGATCCTGCAGGCCGCCTACCAGCTCATGGTTGATGTGTTTGGAAATTATGTCATCCAGAAGTTCTTTGAGTTTGGCAGTCTGGACCAGAAGCTGGCGCTGGCCGAGCGGATTCGTGGTCATGTGTTATCCCTGGCGCTGCAGATGTACGGCTGCAGAGTCATTCAGAAAGCCCTGGAGTTCATCCCCTCCGACCAGCAAGTCATTGTAGGTTTATAAAGCCTGTGTGTTCATGTTATCATCATTAACAAGTCGCTTCGCAGAGCTCATGATCTGAATGTTTGTGGTTTGCAGAATGAGATGGTTCGGGAGCTCGACGGACACGTGTTAAAGTGTGTGAAGGATCAAAACGGCAATCAT
>TCONS_00030037
CTCAACTCATGGATCCTCAAGCAGTCTTAATCTTGGTGGACTGACCAATGGCAGTGGGCGCTTCATCTCAGCAGCTCCTGGAGCGGAGGCGAAGTACCGCAGCGCCACCACCGGCTCGTCTCTCTTCAGTCCCAGCAGTCAGCTCTTCCCCTCGTCACGGCTGCGCTACGGGATGTCTGACGTGATGCCGTCGGGACGCAGCCGTCTGCTGGAGGACTTCAGAAACAACCGCTACCCCAACCTGCAGCTGAGAGAGATCGCAGGACACGTCATGGAGTTCTCTCAGGACCAGCACGGCTCCAGGTTTATTCAGCTGAAATTGGAGAGAGCAAGTCCTGCAGAGCGTCAGCTGGTCTTCAATGAGATCCTGCAGGCCGCCTACCAGCTCATGGTTGATGTGTTTGGAAATTATGTCATCCAGAAGTTCTTTGAGTTTGGCAGTCTGGACCAGAAGCTGGCGCTGGCCGAGCGGATTCGTGGTCATGTGTTATCCCTGGCGCTGCAGATGTACGGCTGCAGAGTCATTCAGAAAGCCCTGGAGTTCATCCCCTCCGACCAGCAAGTCATTAATGAGATGGTTCGGGAGCTCGACGGACACGTGTTAAAGTGTGTGAAGGATCAAAACGGCAATCATGTGGTGCagaaatgcattgagtgtgttcaGCCTCATGCTCTTCAGTTCATCATTGATGCCTTCAAAGGACAGGTGGGCCTCTGttgaagtgtgtgtatgtgtgtgtgagaaggtGTAAACTGGGaagctgtaatttatttatggaGGTCCTGATTTTTTA
>TCONS_00028378
GCAGTCAGCTCTTCCCCTCGTCACGGCTGCGCTACGGGATGTCTGACGTGATGCCGTCGGGACGCAGCCGTCTGCTGGAGGACTTCAGAAACAACCGCTACCCCAACCTGCAGCTGAGAGAGATCGCAGGACACGTCATGGAGTTCTCTCAGGACCAGCACGGCTCCAGGTTTATTCAGCTGAAATTGGAGAGAGCAAGTCCTGCAGAGCGTCAGCTGGTCTTCAATGAGATCCTGCAGGCCGCCTACCAGCTCATGGTTGATGTGTTTGGAAATTATGTCATCCAGAAGTTCTTTGAGTTTGGCAGTCTGGACCAGAAGCTGGCGCTGGCCGAGCGGATTCGTGGTCATGTGTTATCCCTGGCGCTGCAGATGTACGGCTGCAGAGTCATTCAGAAAGCCCTGGAGTTCATCCCCTCCGACCAGCAAGTCATTAATGAGATGGTTCGGGAGCTCGACGGACACGTGTTAAAGTGTGTGAAGGATCAAAACGGCAATCATGTGGTGCagaaatgcattgagtgtgttcaGCCTCATGCTCTTCAGTTCATCATTGATGCCTTCAAAGGACAGGTGGGCCTCTGttgaagtgtgtgtatgtgtgtgtgagaaggtGTAAACTGGGaagctgtaatttatttatggaGGTCCTGATTTTTTA

Function

symbol description
pum1 Enables mRNA binding activity. Involved in pole plasm mRNA localization. Predicted to be active in cytosol. Is expressed in ovary. Human ortholog(s) of this gene implicated in cerebellar ataxia type 47. Orthologous to human PUM1 (pumilio RNA binding family member 1).

GO:

id name namespace
GO:0010608 posttranscriptional regulation of gene expression biological_process
GO:0043488 regulation of mRNA stability biological_process
GO:0035196 production of miRNAs involved in gene silencing by miRNA biological_process
GO:0005829 cytosol cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003723 RNA binding molecular_function
GO:0003729 mRNA binding molecular_function
GO:0003730 mRNA 3'-UTR binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2074 Enables mRNA binding activity. Involved in pole plasm mRNA localization. Predicted to be active in cytosol. Is expressed in ovary. Human ortholog(s) of this gene implicated in cerebellar ataxia type 47. Orthologous to human PUM1 (pumilio RNA binding family member 1).

Ensembl:

ensembl_id ENSDARG00000099256

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028373 False 3560 mRNA 0.57 22 43037657 43089455
TCONS_00028374 False 1969 mRNA 0.54 13 43037657 43090728
TCONS_00028375 False 3228 mRNA 0.57 20 43037658 43084065
TCONS_00028376 False 399 mRNA 0.61 5 43037665 43065877
TCONS_00028377 False 721 lncRNA 0.54 4 43072693 43079678
TCONS_00030037 False 794 lncRNA 0.53 5 43072693 43079838
TCONS_00028378 True 660 lncRNA 0.52 4 43074643 43079838

Neighbor

gene id symbol gene type direction distance location
XLOC_014277 nkain1 coding upstream 2470 43017628 ~ 43035187 (+)
XLOC_014276 snrnp40 coding upstream 21262 43004408 ~ 43016395 (+)
XLOC_014275 fabp3 coding upstream 44351 42955280 ~ 42993306 (+)
XLOC_014273 arpp21 coding upstream 120431 42886413 ~ 42917226 (+)
XLOC_014274 dre-mir-128-2 coding upstream 122116 42915419 ~ 42915541 (+)
XLOC_014281 eef1a1l1 coding downstream 28286 43119014 ~ 43137740 (+)
XLOC_014282 NA coding downstream 159825 43250553 ~ 43251194 (+)
XLOC_014283 DGKD coding downstream 166258 43256986 ~ 43272332 (+)
XLOC_014284 laptm5 coding downstream 206818 43297546 ~ 43309596 (+)
XLOC_014285 matn1 coding downstream 223972 43314700 ~ 43338280 (+)
XLOC_014266 NA non-coding upstream 434368 42560956 ~ 42603289 (+)
XLOC_014267 NA non-coding upstream 464530 42565358 ~ 42573127 (+)
XLOC_014265 NA non-coding upstream 490453 42518577 ~ 42547204 (+)
XLOC_014264 BX950855.1 non-coding upstream 521523 42505974 ~ 42516134 (+)
XLOC_014291 NA non-coding downstream 455919 43546647 ~ 43549011 (+)
XLOC_014295 CR356238.1 non-coding downstream 574663 43665391 ~ 43665511 (+)
XLOC_014300 NA non-coding downstream 696275 43787003 ~ 43791576 (+)
XLOC_014301 NA non-coding downstream 696414 43787142 ~ 43790716 (+)

Expression


Co-expression Network