XLOC_014283 (DGKD)


Basic Information

Item Value
gene id XLOC_014283
gene name DGKD
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43256986 ~ 43272332 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028386
ATGATGTGGTACGGAGTTCTGGGAACTAAAGAGCTTCTGCACAGAACATACAAGAACCTGGAGCAGAGAGTTCTGCTGGAGTGTGACGGGAGGCCGATTCCGCTTCCCAGTCTTCAAGGAATCGCTGTGCTGAATATTCCCAGAACAAACTTTTGGGGAGGAACCAAAGAGGATGATacGTTTACCGCACCGTCCTTTGATGATAAGATTCTGGAGGTGGTGGCGGTGTTCGGCAGTATGCAGATGGCGGTTTCTAGGGTTATTAATCTACAGCACCACCGTATcgcacagTGTCGAACAGTGAAGATCACCATTCTGGGAGATGAAGGTGTGCCGGTGCAGGTGGACGGTGAGGCCTGGATTCAGCCGCCAGGATACATCCGCATCCTGCACAAGAACCGCACGCAAACCCTCACCAGAGACCGGGCTTTCGAGAGCACGCTGAAGTCCTGGGAGGATAAACAGAGAGGAGAGATTCCACGGCTGCTTTCCCAGCATGCATCACAGCCGGAGACCGTTTCTGAAGAGGAAACCACTCAGATCAGCCTGTTCGGGCAAGCGGCCGGAGCGCTGATACACAGtatcAGGGAAGTGGCTCAGTCTCATCCGACTATCGAGCAGGAGTTAGCTCATGCTGTTAATGCCAGCTCCAAAGCCATGGATCTGGTGTACGCAAACTCCAAGAGCAGCACGggtttGAGCTGTAATGTggtgatggacatggtcagtaacgtCAGAGCTCTTCACAGTGAGACTGAACTGCTGCTCGCTGGAAAGATGAGTCTGcagTTGGATCCTCCTCAGAGAGATGAGCTGGCGTGTGCGCTCTCCTCCGTCACGCAGCAGTTGCGCAGATTGTCAGACATCGGCTGGCTCAGTCAGCTCATCGACCCGGCCGACCACGAGCTGTCTGATTTCTCCAAGCGGAGTCGCAGTGCAAAATTCCGCCTGGTGCCCAAATTCAAGAaggacaaaaacaataaaaacaaagagaCGTGTGCCGCCCTCAACATGCCAGTGAGTACGTGGGGTGTGGATGAAGTGGGCGTGTGGCTGGAGATGCTCTGTCTGTCTGAATATAAGGAGATCTTCATCAGACACGACATTAGAGGACCAGAACTGCTGCAGCTGGAGAGGAGAGACCTGAAGGACCTCGGTGTGACTAAAGTTGGCCATATGAAGCGGATCCTGCAGGGAATCAGGGATTTGAGTCGTAACAGCACAGCCAGTGAAGCCTAG

Function

symbol description
dgkd Enables diacylglycerol kinase activity; kinase binding activity; and protein dimerization activity. Involved in several processes, including glycerolipid metabolic process; lipid phosphorylation; and positive regulation of clathrin-dependent endocytosis. Located in clathrin-coated pit; cytoplasmic vesicle; and cytosol.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113111

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028386 True 1239 mRNA 0.53 12 43256986 43272332

Neighbor

gene id symbol gene type direction distance location
XLOC_014282 NA coding upstream 5792 43250553 ~ 43251194 (+)
XLOC_014281 eef1a1l1 coding upstream 119246 43119014 ~ 43137740 (+)
XLOC_014278 pum1 coding upstream 166258 43037657 ~ 43090728 (+)
XLOC_014280 CU207343.3 coding upstream 175926 43080925 ~ 43081060 (+)
XLOC_014279 CU207343.4 coding upstream 179107 43077744 ~ 43077879 (+)
XLOC_014284 laptm5 coding downstream 25214 43297546 ~ 43309596 (+)
XLOC_014285 matn1 coding downstream 42368 43314700 ~ 43338280 (+)
XLOC_014286 sesn2 coding downstream 68783 43341115 ~ 43357457 (+)
XLOC_014287 yrk coding downstream 86743 43359075 ~ 43432415 (+)
XLOC_014288 ahdc1 coding downstream 167069 43439401 ~ 43500299 (+)
XLOC_014274 dre-mir-128-2 non-coding upstream 341445 42915419 ~ 42915541 (+)
XLOC_014266 NA non-coding upstream 653697 42560956 ~ 42603289 (+)
XLOC_014291 NA non-coding downstream 274315 43546647 ~ 43549011 (+)
XLOC_014295 CR356238.1 non-coding downstream 393059 43665391 ~ 43665511 (+)
XLOC_014300 NA non-coding downstream 514671 43787003 ~ 43791576 (+)
XLOC_014301 NA non-coding downstream 514810 43787142 ~ 43790716 (+)
XLOC_014302 NA non-coding downstream 528500 43800832 ~ 43804410 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location