Fish Transcriptome and Expression Database

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model fish

XLOC_014295 (CR356238.1)

Basic Information

Item	Value
gene id	XLOC_014295
gene name	CR356238.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007130.7
NCBI id	CM002903.2
chromosome length	48449771
location	43665391 ~ 43665511 (+)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028411
CAAAAAGCGCAATTTTTTGGTGTGAACACaacaagaccagttactcactgaagctaagcagggctgagcctggttagtacctggataggagaccacacgGGAAAACTAGGTTActtttgga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000082166

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00028411	True	121	rRNA	0.45	1	43665391	43665511

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_014294	si:ch211-199g17.9	coding	upstream	53511	43604256 ~ 43611880 (+)
XLOC_014293	si:ch211-199g17.2	coding	upstream	61459	43579786 ~ 43603932 (+)
XLOC_014292	cd164l2	coding	upstream	93093	43563179 ~ 43572298 (+)
XLOC_014291	NA	coding	upstream	116380	43546647 ~ 43549011 (+)
XLOC_014290	wasf2	coding	upstream	122263	43523690 ~ 43543128 (+)
XLOC_014296	si:ch211-193k19.1	coding	downstream	3611	43669122 ~ 43707261 (+)
XLOC_014297	cap1	coding	downstream	50400	43715911 ~ 43737071 (+)
XLOC_014298	si:ch1073-513e17.1	coding	downstream	85165	43750676 ~ 43768721 (+)
XLOC_014299	rpl11	coding	downstream	115459	43780970 ~ 43786940 (+)
XLOC_014300	NA	coding	downstream	121492	43787003 ~ 43791576 (+)
XLOC_014282	NA	non-coding	upstream	414197	43250553 ~ 43251194 (+)
XLOC_014280	CU207343.3	non-coding	upstream	584331	43080925 ~ 43081060 (+)
XLOC_014279	CU207343.4	non-coding	upstream	587512	43077744 ~ 43077879 (+)
XLOC_014274	dre-mir-128-2	non-coding	upstream	749850	42915419 ~ 42915541 (+)
XLOC_014301	NA	non-coding	downstream	121631	43787142 ~ 43790716 (+)
XLOC_014302	NA	non-coding	downstream	135321	43800832 ~ 43804410 (+)
XLOC_014314	NA	non-coding	downstream	1251588	44917099 ~ 44959698 (+)
XLOC_014315	NA	non-coding	downstream	1693766	45359277 ~ 45365727 (+)

Expression

Co-expression Network