XLOC_014296 (si:ch211-193k19.1)


Basic Information

Item Value
gene id XLOC_014296
gene name si:ch211-193k19.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43669122 ~ 43707261 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028412
GTTTGTGAGTGGCATCTGCGTTATAATTTTCAAAACAAATAATATCGTTAAAACTTTGTCGTAACTCTAATGCCATGTGGATTCAATGTGTTGTCTCTAAAGGTGTAGTATTGTTTTGTGACCGGTTTCTAAACTTTTAAAATGACGAGTCGGTTATGCGGGGCGGAAACGCGACGGTTCTATATTTCTGTTTCCGTGGGAGTGTGTGATAGCGAGAGATTTACTGACCCAGATAGAGATGAAAACAGGTCCTGCTGCTGTAGGGGGTCTCCTGTCATTTTGAGATCTAACTATCTGACTGACACCGAGCAGGACTGGTTTGTGGCAGAAATCCCTGTATTGACCGAGTGCTGTGGTGCCATGCGGCTGTTTCTTGAGGAGGTGTTTGTGTGGATGACTCTTCATTTCCCTCGCTGCAGTGCTGGGGTTTCTGTACTGTTTTTGGGGAAAGATTGCTGCACTTAGTTGTAAGATGCCCAATGTGGAGCTGAGGATGCACCGCTGGAAATGGCAGACACGTTTTACCTCGCTTTACCTGAGCTGTGTGTATTTACTCTGCTCAGTCTCTGGGGTCTCTGGCAGCATCTGCTCAGTGACCGGCGGTGTTTTGGGGATCCACTGGAGCAGCGTCATCGGTCTGGGCTGGCAGCCGCTGGCGGTGGACCAGGGAGGGTCACGCTGCTGGGAGTCCTGCTGTTTGGAGCCGTCCTGCGGGGCCGTGTGGAGCCTCGGCGGACGCTGTGTGCTGTTGGCCTGCTCTCAGAGGGAAACCTGCGGCATCTCGTCTCTTCCGCAGCCACATGTAGAGTCTCTAGGGCTCCTGCAGCTCCTCAACAAGAGCAAGAGGAGGAAAACCCGCAGCGCTCAGGACATCAGAGCAATCAGGGACACGGAGCAGGACATGTCTTCTAACCCTTCAGAGCCACTGACCACATCTAACAGTGCGGCGAGCTCCAGCTCCAGTGGAGAGCAGACAGctgaacacaacacaacactggaTTCAGATGCTGCGAATCATTCAACTCTGAACAACAGTAATCAGTCACCACAGTCCACAGTGGCTCCAGCCACAACACCAGCTGTGCGAGAGCTGGTCGTCTCTGCTGGCCAAAATGTGGAGGTCACTCTACCACGCAATGAAGTGAAGCTCAGTGCTTATGTAGTGCCAGCGCCACCTACAGGGACCAACTATGACTTTGACTGGCGTTTGATAACACATCCAAAAGATTACAGTGGAGAAATGGAGGGTAAACACACCATGACACTTAAGCTGAGTAAGCTGACGGTGGGTCTGTATGAGTTTGAGGTGGTGGTAGATGGAGAGGGTGCTCACGGGGAGGGATACGTCAATGTCACTGTCAAACCAGAGCCACGAGTGAATAAGCCACCTGTTGCAGTGGTTTCTCCAAAGTATCAGGAAATCTCATTACCGACCAGCTCCACTGTGATTGATGGCAGTCGGAGCACTGATGATGATAAAGTGGTGCTGTGGCACTGGGAGGAGGTGAAGGGGCCGCTCCGAGAGGAAAAGGCCTCAGGAGACACTGATATTCTCACCCTCACCAACCTGGTTCCCGGAAACTACACCTTCAGGTTTGATTATTCTTCATCTACATCACAGCATGTTTGCAGTCCTCAGTTATTGATTCTTACAGTCACTGATTCAGATGGGGCTCAGAATTCAACCCAAGCCATGCTGTTAGTCAACAAGGCCACAGACTACAGGCCTACTGCTAATGCTGGACCCAACCAAGTGATCACACTCCCACACAACTACATCACACTGAACGGCAACCAGAGCACTGATGACCACGACAATCTGTCCTACGAATGGTCACTCAGCCCTGAGAGCAAAGGGAAGGTGGTGGAGATGCAGGGAGTGAGGACGCCAACTCTGCAGCTCTCTGCCATGCAGGAGGGAGATTACACCTTTGAATTGACCGTCACTGACTCGTCTGGACAGCAGGACACGACTCAGGTCACTGTCATTGTCCAGCCAGAAAATAACCAGCCTCCTGTAGCGGATGCTGGTCCAGACAAGGAGCTGACGCTGCCAGTTGATCACACCACACTGGATGGCGGCAAGAGCACAGATGACCAGAAAATAGTCACGTACCACTGGAAAAAGACCAAGGGTCCAGAAGGGGTGAAGCTTGATAATGCAGAAACTGTGGTCGCCACCGTCACTGGCCTGCAGGAGGGCGAGTACATTTTCATGCTGACCGTGACGGATGAAAGAAACCTGGAGAGCTCTGACACCGTCTCTGTCATCGTCCGAGAAGAGAATGATCAGCCACCGGTTGCAAAAGTGGTGTCTAGTCCTCCGATCACTTTGCCGGTGCGTACAGCAGTTCTAGATGGTTCTCGATCATCAGATGATAAAGGCAGCATCAGTTATCTGTGGACCCGTGAGGAGAACAGTCCAGCCGCAGGGGATGTCCTGAATCACTCTGACCACCAGGCTGTGCTTTTTCTTGGTAATCTGGTGGAAGGGAAGTACAGTTTCACTCTGACCGTCACTGACAGTAAAGGAAAGACCAGCTCTGACAGTGGCGTTGTAGATGTTCGGCCAGATGTCTACGAGCGGGATTTGGTGGAGCTGATCCTGGAAGTGGCCGTGGCTCAGGTGTCCCGCAGACAGAAGGATATGTACATCAGGCAGGTCGGTGTCCTGCTGGGTGTCCTGGACAGTGACATCACCATTCGAGAGATTAGCGCCTTTAATGAGCACAGCACTCGTCTGGTATTTCTGGTATCAGGAGGTCCAGGAAGGCCTCCATTAACTGGGCATAGTGTGGCTATGGAACTACGCAACAAATTTCGCAAGCAAAAAAACGAGTTCCTCATCTTTAAGGCCCGACGGGTGGACACAGTTATCTGCCAGCTGAACTGCTCTGGTCATGGAGAATGCGACTCTTTCACCAGACGCTGCGTTTGCCACCTGTTCTGGATGGAGAATTTGTTTAGTACTTATTTTGGAGATGCTGAGAGCAACTGTGAATGGAGTGTATTATATGTAACGATAGCATCCTTCATGATCGtggttgccatagcaactgtaataTGGGGCTTGGTGTGCTGTTGTCGAAGGCGGAAAAGCAAAGTGAGACGAAAGAGCCGTTATAAAATGTTGAACGAGGATGATCAAGAGACTATGGAGTTAAAGTTACCTAGACCTGGTCGTCTGAAGTCTGTGCCAGCTCCCACATCTTCTGCACTCATGCACTCAGACTCTGATCTGGAAAGTGACGACGGTCAAGCAGGAATCCCCTGGTCAGATCGAGAGCGCGGGAAGCTGCTTCCACCCCAAAACGGATCTCTACGTAACGGCCAGGGTCCACATAAACCTAAAAAAACACGAGAGGAGCTGCTTTAGCACGGCTCCCGTACTGCACCAACACACTGTATTCACCCCTTATCTGGCACATGGAGGAACTGCAGGACTTCCGGAGTGAATTGAAGCGCAGCCCTGAGCCAACATGAGAAGGAATTAAACCCGACAGGTCAGATCTGTAAAGCCATGCAACTGAATAGGCAATGAGAATGTACCTGCTGTAGTGCAGAGATGGTGTCCGGTGAGTGAATATCTGAGAAACGTTTCAAAAACTGAGCCTCATCACTGTCATCTTCCTAAGAAGCTTCCCGCACTGCTGTAAATGTGTTTCTTACTTTAGTTTGtgccttgtttttagtccaaatatataacaattcttaaatcaagaagctttttataGACGAGTAcaaaatagtgttttgtttttagaaatcgTAAGTCAAAATTAAATTCGTTTacgctaaattatctgccaatgaggtaagaAAAAAAGCATTGTTTTTGGTTTACTTGGAGTGTTCATGAATGCGATCATGTTGTGGTTGTCATATAATCATGTTGTgcatgtgaa
>TCONS_00028413
TTGATGCAGGACATGTCTTCTAACCCTTCAGAGCCACTGACCACATCTAACAGTGCGGCGAGCTCCAGCTCCAGTGGAGAGCAGACAGctgaacacaacacaacactggaTTCAGATGCTGCGAATCATTCAACTCTGAACAACAGTAATCAGTCACCACAGTCCACAGTGGCTCCAGCCACAACACCAGCTGGTACAACACTGCTCTCTGTCATTGTCTTAGGGCTGGTCGTCTCTGCTGGCCAAAATGTGGAGGTCACTCTACCACGCAATGAAGTGAAGCTCAGTGCTTATGTAGTGCCAGCGCCACCTACAGGGACCAACTATGACTTTGACTGGCGTTTGATAACACATCCAAAAGATTACAGTGGAGAAATGGAGGGTAAACACACCATGACACTTAAGCTGAGTAAGCTGACGGTGGGTCTGTATGAGTTTGAGGTGGTGGTAGATGGAGAGGGTGCTCACGGGGAGGGATACGTCAATGTCACTGTCAAACCAGAGCCACGAGTGAATAAGCCACCTGTTGCAGTGGTTTCTCCAAAGTATCAGGAAATCTCATTACCGACCAGCTCCACTGTGATTGATGGCAGTCGGAGCACTGATGATGATAAAGTGGTGCTGTGGCACTGGGAGGAGGTGAAGGGGCCGCTCCGAGAGGAAAAGGCCTCAGGAGACACTGATATTCTCACCCTCACCAACCTGGTTCCCGGAAACTACACCTTCAGTCTTACAGTCACTGATTCAGATGGGGCTCAGAATTCAACCCAAGCCATGCTGTTAGTCAACAAGGCCACAGACTACAGGCCTACTGCTAATGCTGGACCCAACCAAGTGATCACACTCCCACACAACTACATCACACTGAACGGCAACCAGAGCACTGATGACCACGACAATCTGTCCTACGAATGGTCACTCAGCCCTGAGAGCAAAGGGAAGGTGGTGGAGATGCAGGGAGTGAGGACGCCAACTCTGCAGCTCTCTGCCATGCAGGAGGGAGATTACACCTTTGAATTGACCGTCACTGACTCGTCTGGACAGCAGGACACGACTCAGGTCACTGTCATTGTCCAGCCAGAAAATAACCAGCCTCCTGTAGCGGATGCTGGTCCAGACAAGGAGCTGACGCTGCCAGTTGATCACACCACACTGGATGGCGGCAAGAGCACAGATGACCAGAAAATAGTCACGTACCACTGGAAAAAGACCAAGGGTCCAGAAGGGGTGAAGCTTGATAATGCAGAAACTGTGGTCGCCACCGTCACTGGCCTGCAGGAGGGCGAGTACATTTTCATGCTGACCGTGACGGATGAAAGAAACCTGGAGAGCTCTGACACCGTCTCTGTCATCGTCCGAGAAGAGAATGATCAGCCACCGGTTGCAAAAGTGGTGTCTAGTCCTCCGATCACTTTGCCGGTGCGTACAGCAGTTCTAGATGGTTCTCGATCATCAGATGATAAAGGCAGCATCAGTTATCTGTGGACCCGTGAGGAGAACAGTCCAGCCGCAGGGGATGTCCTGAATCACTCTGACCACCAGGCTGTGCTTTTTCTTGGTAATCTGGTGGAAGGGAAGTACAGTTTCACTCTGACCGTCACTGACAGTAAAGGAAAGACCAGCTCTGACAGTGGCGTTGTAGATGTTCGGCCAGATGTCTACGAGCGGGATTTGGTGGAGCTGATCCTGGAAGTGGCCGTGGCTCAGGTGTCCCGCAGACAGAAGGATATGTACATCAGGCAGGTCGGTGTCCTGCTGGGTGTCCTGGACAGTGACATCACCATTCGAGAGATTAGCGCCTTTAATGAGCACAGCACTCGTCTGGTATTTCTGGTATCAGGAGGTCCAGGAAGGCCTCCATTAACTGGGCATAGTGTGGCTATGGAACTACGCAACAAATTTCGCAAGCAAAAAAACGAGTTCCTCATCTTTAAGGCCCGACGGGTGGACACAGTTATCTGCCAGCTGAACTGCTCTGGTCATGGAGAATGCGACTCTTTCACCAGACGCTGCGTTTGCCACCTGTTCTGGATGGAGAATTTGTTTAGTACTTATTTTGGAGATGCTGAGAGCAACTGTGAAGGAAGCTTGTATGTCTTGTTTGATGATCCatttatTGTATTATATGTAACGATAGCATCCTTCATGATCGtggttgccatagcaactgtaataTGGGGCTTGGTGTGCTGTTGTCGAAGTTTAAAAAAAGAGCCAATgaacctggcaataaagctctttctgattctgattttgaACTTGGCATTCAATTTGAAAGTCTTCCTTTTTTTATATCTCCTGCTGTTGTGTGCTCCTTCAGGTCGTCTGAAGTCTGTGCCAGCTCCCACATCTTCTGCACTCATGCACTCAGACTCTGATCTGGAAAGTGACGACGGTCAAGCAGGAATCCCCTGGTCAGATCGAGAGCGCGGGAAGCTGCTTCCACCCCAAAACGGATCTCTACGTAACGGCCAGGGTCCACATAAACCTAAAAAAACACGAGAGGAGCTGCTTTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000035660

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028412 False 3905 mRNA 0.50 22 43669122 43707261
TCONS_00028413 True 2517 mRNA 0.50 18 43684376 43706732

Neighbor

gene id symbol gene type direction distance location
XLOC_014295 CR356238.1 coding upstream 3611 43665391 ~ 43665511 (+)
XLOC_014294 si:ch211-199g17.9 coding upstream 57242 43604256 ~ 43611880 (+)
XLOC_014293 si:ch211-199g17.2 coding upstream 65190 43579786 ~ 43603932 (+)
XLOC_014292 cd164l2 coding upstream 96824 43563179 ~ 43572298 (+)
XLOC_014291 NA coding upstream 120111 43546647 ~ 43549011 (+)
XLOC_014297 cap1 coding downstream 8650 43715911 ~ 43737071 (+)
XLOC_014298 si:ch1073-513e17.1 coding downstream 43415 43750676 ~ 43768721 (+)
XLOC_014299 rpl11 coding downstream 73709 43780970 ~ 43786940 (+)
XLOC_014300 NA coding downstream 79742 43787003 ~ 43791576 (+)
XLOC_014301 NA coding downstream 79881 43787142 ~ 43790716 (+)
XLOC_014282 NA non-coding upstream 417928 43250553 ~ 43251194 (+)
XLOC_014280 CU207343.3 non-coding upstream 588062 43080925 ~ 43081060 (+)
XLOC_014279 CU207343.4 non-coding upstream 591243 43077744 ~ 43077879 (+)
XLOC_014302 NA non-coding downstream 93571 43800832 ~ 43804410 (+)
XLOC_014314 NA non-coding downstream 1209838 44917099 ~ 44959698 (+)
XLOC_014315 NA non-coding downstream 1652016 45359277 ~ 45365727 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000054_01173734_01187846 KIAA0319L coding CI01000054 null 1173734 ~ 1188947 (+)