XLOC_014300


Basic Information

Item Value
gene id XLOC_014300
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43787003 ~ 43791576 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030041
ATCAATTTAAAACCGAATACATCTGGACATTTTAAAGGGTGAAAATTATGTGTTGTTCTGCAGAGTCACACTGCTGTGGTCTTCATGGGACGGGGTGTTTCGGTGTCTGCGGGACGTGTGTCTTGGAGGCAAACCCAGAGCGCAGCAGGACACTCCAACGATGGGTTCAGGTAGATCCTCCACTGCTGCCCAGCTGTCGGTGCCAGGATCATACCTCTGCACCGCCGACTTGTAGCGCTTTTCTGCTTCATTCCATCCACCTAATATATACAGATGACTCCCGATTGGGGACATCCCAGCCGTGCTCACTCCTATTGGCAGATTAGCAGCTCTACTCCACTCCTGGCTCTCCGAAGAATAAACCTCCATGGTCATCACATCAATACGGACTCCACCCGCTCCCAATTGGCTTCCACCAACAACATACACTTTTCCTGCTAGTAATGCAGAGCAATGCCACCCGCGTGGTGTTTCCAGCTCTCCTTTCTCGCTCCATGCATCTCTGTCAATGCTGTATTGGATGACAGAGCGGGAGTATGCGCAGTTGACGTAGCCGCCGGTCACTAATATATCTCCTGAGGGAAGGACCGCGCTGGAATGGCAGCATCTTGGCATATCCATTGGGGTGCGGAGCTGCCATGTGTTGGTTGAAGGTTGGTAGCTTTCTATGGTGGCCAATAGGCCGTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030041 True 687 lncRNA 0.52 2 43787003 43791576

Neighbor

gene id symbol gene type direction distance location
XLOC_014299 rpl11 coding upstream 63 43780970 ~ 43786940 (+)
XLOC_014298 si:ch1073-513e17.1 coding upstream 18282 43750676 ~ 43768721 (+)
XLOC_014297 cap1 coding upstream 49932 43715911 ~ 43737071 (+)
XLOC_014296 si:ch211-193k19.1 coding upstream 79742 43669122 ~ 43707261 (+)
XLOC_014295 CR356238.1 coding upstream 121492 43665391 ~ 43665511 (+)
XLOC_014302 NA coding downstream 9256 43800832 ~ 43804410 (+)
XLOC_014303 eloa coding downstream 31392 43822968 ~ 43833995 (+)
XLOC_014304 pithd1 coding downstream 86473 43878049 ~ 43880951 (+)
XLOC_014305 lypla2 coding downstream 92544 43884120 ~ 43901467 (+)
XLOC_014306 ankib1a coding downstream 114095 43905671 ~ 43960753 (+)
XLOC_014291 NA non-coding upstream 237992 43546647 ~ 43549011 (+)
XLOC_014282 NA non-coding upstream 535809 43250553 ~ 43251194 (+)
XLOC_014280 CU207343.3 non-coding upstream 705943 43080925 ~ 43081060 (+)
XLOC_014279 CU207343.4 non-coding upstream 709124 43077744 ~ 43077879 (+)
XLOC_014314 NA non-coding downstream 1125523 44917099 ~ 44959698 (+)
XLOC_014315 NA non-coding downstream 1567701 45359277 ~ 45365727 (+)
XLOC_014316 CT737154.1 non-coding downstream 1717289 45508865 ~ 45508981 (+)
XLOC_014317 NA non-coding downstream 1935638 45727214 ~ 45728062 (+)

Expression


Co-expression Network