XLOC_014301


Basic Information

Item Value
gene id XLOC_014301
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43787142 ~ 43790716 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030042
GTTGGTTGGTGAGTCGTTGTAATGCTTTAGAGGGAAAAAAGAAGCATGTTCGGGTTTAATCAATTAAGCTTTATTTAAATCTGAGATCTAGTAGCAGATACACTCTAGgctGTTCTCTTATACTGGAATTCCCACTTGGCTGTGCATTCGGGAGCTGacatctttgttttggaagatcATGTTTTATCTGTTACAGATGTTCATTGTAATGATCATATAAAGAAAGTAAAGAGATGTTATTGAGACATTACGGTCACTTTAAAACAAGAAACATCAATGGGCTAGAATGGGGAAGGAAACTTTTACCATTAGTCAGTTTATAGACCATGAGTTAAAGAGATGGCTCATTTAAACctgaaaattcatttatttgcccatcacttgtttcaaacctcaTTGGAATATCTTGTGTTTGACAAAAAGACGAAGAAACCGGTAAACATTGACTTCTGTaggatttgtttttcctgctatgaatgtcaatggttacaggtttcagcttcaAAATGATAGTGTTTAACAGAATGAAGAAACCCCTGAGGGTTTGGAGAACTTGAGGTTGAACAATTGAGTGTATTTTAAATTTGTGGCTGCGCTAATTTAAAATTGGCAACATTTGAAACCCCTTTCTAACTAATttcatgtgtttgtgtataaataatacaaatcttAAATACCCCTGAGTGATATTTGCGGTGACTGAGTTTGAAAAGTGAGAGAGaacatttagaataaaaaataaataaatatgaggaataaataaacaattgctgCTTTATTCAGCACTACTGAATGAAGCTTTTTATATAATGGTGTTTTCAGTAGAACTGTTCGGCTCAATTTCTAAAACTCTTCCATAAACTTCACTATATTCCTCACACTGCAGAGGCGTGTGTGAAATGTACCTTTCATATTCTTCATTCATGTAGTGCCTGTTCTCTGAACTTCCAGTGAATCTAAAAGCATCTCTGGTGTTTAAGAACAAGACTAAAACAAagacttaaagggttagttcacccaaaaatttgaaatgactatttactcaacctcaagtgatcccaaacctttgagtttcccTATTCTGTTGAAGAATAGGATATTCTAAAGATGTaaccttgacttccatagtaagaaaaacaaatactatagaggtTAATGGTTACAAGTATCTacagatttttcaaaatatctttagtgtctaacagaagacagaaacccAAAGGTTTGTGATGAGTAAATCATTTCATAAATTTCAGGTTTTAGTGAACTACACCTTTTGATGGTGTTACACTCAGTGTTGGGGGTACCACATTACAAGTAATGcgagttatttaatatttttcaagtaaCTAGtagcattactttttttttttttttttaatcaatatttgagttactttttgaaaCTTATCTGGGCTACTTTTCTGCgatggaagtattctcattagtaactcaaaagtaatgtaatgcattattCAGGGCTGCCACTGCCTGGTATAGGCCCAATGGCAACATTTCGTAGGTGTCGCGGACGAAATAGGAGGACGGATGGAGTTGACATACGAAAGTGGGGGGGCGGGGGCGGCATGGAGTCGCAGACAAAAGTGATTAGCGCCCGGGTGGGCCCCTAATAGTATCTCTGGGGGACCAATGTGGCATGAGCCCAATCGTCCTAACTTTCTCCCCCTAGTGGCGCCCCTGGCATTAACCACAATAAGAAGTAAcgaagtaacgcaactagttttAATTaagaaaagtaactcaaaagtaatgaaACGCATTATTCAGGGACGCCACAGGCAGGTTCGGGCCCTATAACAACATTGGGTGGGGGACGTGTAGtcgtggacaaaagtgaagagcgggggggaGGGGGGTTGTGGGCCCCTGATAGTATCTCTGGGGGGCTCTTAGAATCGTTCATTTGTCTCAATACAAAGTAATAAAGTGATGCAACTATTTACTTAACGTAACATATTACTCGGGGTCCCCGCTGAGGGGTATGGGTCCTGTGACAACATTTTGAGGGTGTCGAGAACGAAAGTGGGAAAAAAAGGAAAGGGAGGTGGGAGAGGTGAGTGGAGTCACGGACGGAAGTGAAGAGCGGGTGGGCCTCTTCGGCATGGACCCCGTCGTCCTAACTCCACATATCCCCCACCTCCCTTAGTGGCACCCCTGCCACTAATCACAATAAAAAGTAACGCAACTAACTACTTTCTCTTAattaaaagtaactcaaaagatAACGTAACGCATTATTGCCCTATGACAACATTGGGGGTGTGGAACGTGTAGTCGTGAACAAAAGTGAAGAGTGGGGTTGGTGGGGGTGTTGTGGTGGTATAGTGTCTCTGGGGGGCCCCAAAACGTCATGGGCCCTTAGAATTGTCCTATCTTCATTAGTCACAGTAaaaagtaacacaactagttacttttacTTAAGAAAAAGTAACTAAAAGTAACGTAACACTACTTAAAGGTGCTGCTGGCCATTACAGGCCCTGTGACAAGATTTTGAGTGTGTCGCGGACTAaagttagcaaaaaaaaaaaaagagggaggGGGTGGAGtcatggacgaaagtgaagattaaaagtaaatcaaaagtattgtaatgcattattCAGGGACGCCGTTTGCCGGTACGGGCCCGATGACAACATTGGGGGTGGGAGACGTGTAGTCGAGAACAAAAGTGCAGAGCGGAGGGTGGTGGGGCCCCAAAACAgcatgggcccttagaatcgtcctaatTTTATTAGTCACATTAAAAAGTAACAAAGTAACGCAACTTACTTAagaaaaagtaacttaaaagtaacgTAACACATTACTCAAGTACAGACGTGGAGTCGCCCTTAGAATCGTCATAACCCCCCTCCCTCCCTGCGGCACCCCTGgcattaattacaataaaaagtaatgtaactagttactctttgggggagtaactccatatcgtaatgcattactttcaaaagtaactttccccaacactgtttaCTCTTTATACTCTCAAATTTTCAATCCCAAATTTCTCTTTCTTGTTCTCTCACTTCTTCTCTCcatcaatctctctcttttcacCCTACACTGGTgtaaaatatccgtaaattagcagctttcttatattttgtgattcatactTTGATTTTTCCTCATTGTTTATGCTTTTgacttgcattatgggactttaatCTTTCGTCCAACAACCTTTAACCGTCAGAATTTCAAATATAGTCACTtttctgaacatttttaatagtttaaagtgctattttgtctgggttggtgttggaGATTACGCTACAAACACCATGCAATCAACTCCCAGAACATTTTactgacttatttctctatatattatttattatac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030042 True 3376 lncRNA 0.39 2 43787142 43790716

Neighbor

gene id symbol gene type direction distance location
XLOC_014299 rpl11 coding upstream 202 43780970 ~ 43786940 (+)
XLOC_014298 si:ch1073-513e17.1 coding upstream 18421 43750676 ~ 43768721 (+)
XLOC_014297 cap1 coding upstream 50071 43715911 ~ 43737071 (+)
XLOC_014296 si:ch211-193k19.1 coding upstream 79881 43669122 ~ 43707261 (+)
XLOC_014295 CR356238.1 coding upstream 121631 43665391 ~ 43665511 (+)
XLOC_014302 NA coding downstream 10116 43800832 ~ 43804410 (+)
XLOC_014303 eloa coding downstream 32252 43822968 ~ 43833995 (+)
XLOC_014304 pithd1 coding downstream 87333 43878049 ~ 43880951 (+)
XLOC_014305 lypla2 coding downstream 93404 43884120 ~ 43901467 (+)
XLOC_014306 ankib1a coding downstream 114955 43905671 ~ 43960753 (+)
XLOC_014291 NA non-coding upstream 238131 43546647 ~ 43549011 (+)
XLOC_014282 NA non-coding upstream 535948 43250553 ~ 43251194 (+)
XLOC_014280 CU207343.3 non-coding upstream 706082 43080925 ~ 43081060 (+)
XLOC_014279 CU207343.4 non-coding upstream 709263 43077744 ~ 43077879 (+)
XLOC_014314 NA non-coding downstream 1126383 44917099 ~ 44959698 (+)
XLOC_014315 NA non-coding downstream 1568561 45359277 ~ 45365727 (+)
XLOC_014316 CT737154.1 non-coding downstream 1718149 45508865 ~ 45508981 (+)
XLOC_014317 NA non-coding downstream 1936498 45727214 ~ 45728062 (+)

Expression


Co-expression Network