XLOC_014309 (CR786578.2)


Basic Information

Item Value
gene id XLOC_014309
gene name CR786578.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 43987389 ~ 43989462 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028430
GTGAACTGATCGACAGCTACTTTCGTGTCTTTCAGTGTTTTTTGACGACTTTTGAATTGAGCATTGACTGTTCATAATGTCACTGTTTACCAGTGTATTTCGGCAGCTGTCTGCATGTTTTACACCTTCATGGGGCAGAAGGCTGAGCCCTCAGATCGCTGATATAGGTGCAGAGGCAGGAGAAAGCAAGGCCatgtccacacagaaacaccgcaAGGTGAAGTCCCATCATGGACACAGACCGGGCAAAGAGGGAGAGGGTCTGAAAGACCAGGCTGAAGAGGAAAAACAAGCTCTCAGTGCTGAAAACATACAGAGCACCGAGAGAGAAGGAGGAaacggagaacctggaggaaagaaaagaaagaggagaaagctgaaaaacaaaaaGACTCTTCCTCTTCCTGTAGAGGTCAAACCTCTGCCAGCTCCAGCCTGTTTCTCCTCCTCCCCTCCAGTTGGAGATCAACCTGAACATCCAGATGTCCTCGCTCTCCCAGCTGCTGGCCTCAAACCTCTGCTGAAAGACAAAGAGTCTCTTCCTCGTCTTGTTGAGGTCAAACCTCTGCCAGCTTCAGCCTGTTTCTCCTCCTTAACACCAGTTGGAGATCAACCTGAACATCCAGAGGTTCTCGTTCTCCCAGCCTCTCACCTCAAAGCCTTGTCACCTCTCTCAAACCCAGCATCCCGTCCTCAATCGCCTGTTGAGGAAACTGATGAGGTGCTGCCAAGCTCAGTGATCCAAGTGGCTCCATGTGTCTCTCCAGAACCAGTCCTCCTTCCCCTCCAGAGCTCTTCTGAGGTGGCTTCTCTGTGCTCGATTCCTTCATTCAGTGAGCCGTCTCTCCTCCAGAGTCCTCCTGAAACGCTGCCGATTCCTCCAATCTTTGCGTTTGACGAGGTGGTGTCTCTTGTAAAGCCTCAAGCATCTGAGTGTTCTCCCTCTTCAGGCCTCATGCTCTTTGACTTTGAGGATGAGGAGCTTGAATTTATGGAGTACACGGAGGAAGACATAGAAGCTTTCTATGAGTCTGAAATGAAGCCGAGGCGGATGGCGGCTTGGCTGGAGCAGGAGGAAGTGACGGAGGTCCAGAAAGATGGAGGAAAGGGAGCCTCGCAGGTCATACAAAACCCGCTGAATGAGGTGTCTCGTGATGAGGCGTTTGAGGAGCTCCTGATTCAGGCGTTCTGCACCGGGCCTCCTGTGTACACCGAAATCAAGAGCAGGAAGAAGCCAAAGAGGAACGGCCCGCTGGTTCTGTTCAGCTTGATGGAGGAGAAGGTGAAGAAAAAGCAGGAAAAGAAACTGCGTAAGGAGGAGGAGAGAAATGAGAGAAATCTCCTGCGGGAACGCTACAGAAATGATCCAAAACTCAAACACTTGTGCATCAATAAGCACAATCCCAACTTCTGCTGGTCCTGAAGCGGATCACCGTCCCTCCCTGACACCTCCTTACACCTTTACCCTACTGCACATTCCTGCCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096299

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028430 True 1485 mRNA 0.51 2 43987389 43989462

Neighbor

gene id symbol gene type direction distance location
XLOC_014308 nkd3 coding upstream 6513 43978814 ~ 43980876 (+)
XLOC_014307 gatad1 coding upstream 10867 43969363 ~ 43976522 (+)
XLOC_014306 ankib1a coding upstream 26636 43905671 ~ 43960753 (+)
XLOC_014305 lypla2 coding upstream 85922 43884120 ~ 43901467 (+)
XLOC_014304 pithd1 coding upstream 106438 43878049 ~ 43880951 (+)
XLOC_014310 nkd3 coding downstream 6474 43995936 ~ 43998061 (+)
XLOC_014311 nkd3 coding downstream 14886 44004348 ~ 44006445 (+)
XLOC_014312 nkd3 coding downstream 20011 44009473 ~ 44036792 (+)
XLOC_014313 lrrc14b coding downstream 50387 44039849 ~ 44047176 (+)
XLOC_014314 NA coding downstream 927637 44917099 ~ 44959698 (+)
XLOC_014302 NA non-coding upstream 182979 43800832 ~ 43804410 (+)
XLOC_014300 NA non-coding upstream 195813 43787003 ~ 43791576 (+)
XLOC_014301 NA non-coding upstream 196673 43787142 ~ 43790716 (+)
XLOC_014295 CR356238.1 non-coding upstream 321878 43665391 ~ 43665511 (+)
XLOC_014291 NA non-coding upstream 438378 43546647 ~ 43549011 (+)
XLOC_014315 NA non-coding downstream 1369815 45359277 ~ 45365727 (+)
XLOC_014316 CT737154.1 non-coding downstream 1519403 45508865 ~ 45508981 (+)
XLOC_014317 NA non-coding downstream 1737752 45727214 ~ 45728062 (+)
XLOC_014321 NA non-coding downstream 2101855 46091317 ~ 46093652 (+)

Expression


Co-expression Network