XLOC_014315


Basic Information

Item Value
gene id XLOC_014315
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 45359277 ~ 45365727 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030045
GATAAGCCCACGGCGCAGTCTGAGCACTTGACCGCACATGCAGGACAACGATAGCAGAAGAGAAGCAGGAAGCGCATCATCGGCGGAAGATCCAGCGCCGATTGTGAGATTCTCACTTTCACATCAGGTTTGTTCAGCGGAGTGTTGGAGAGGACAGAAGACTGACTGTGAGAGTCCAGAAAGCCTGACAAGCTGTCCAGCATCAAAGTCTTCCTGCCATCAAACCCTAGAGGATGAAGATGTTGATCTGAGAGCTGAGCAGGTACATGTGCAGAGCCGCTCGGGGTCAGGATCTCTGACTGTGAAGGAGAGCGCAGAGTTAGTGGGAcagaaataagaaagaaagagcaAGAGGAAAAATGGAGGCCATGAGCACTTACTGCAGCTGTCACTGTAGGAGAGGATCTGCAGGAGCTTTATGGCAGCTGTGGATCGCCGTAATCTGCAGTTTTGTCTTCAAAGTTTTGTCCGTTTTAAAATTGAatcaatttagaaaaaaaaagaaaaaagaaaaactaaactaaatcaaAAGTAGAGAAGTCATGGTTCATGGCCAGTGGCTTTTCTAACTAGCAACTAGAGGCAGGGTTTTTTGTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030045 True 597 lncRNA 0.47 2 45359277 45365727

Neighbor

gene id symbol gene type direction distance location
XLOC_014314 NA coding upstream 399579 44917099 ~ 44959698 (+)
XLOC_014313 lrrc14b coding upstream 1312101 44039849 ~ 44047176 (+)
XLOC_014312 nkd3 coding upstream 1322485 44009473 ~ 44036792 (+)
XLOC_014311 nkd3 coding upstream 1352832 44004348 ~ 44006445 (+)
XLOC_014310 nkd3 coding upstream 1361216 43995936 ~ 43998061 (+)
XLOC_014316 CT737154.1 coding downstream 143138 45508865 ~ 45508981 (+)
XLOC_014317 NA coding downstream 361487 45727214 ~ 45728062 (+)
XLOC_014318 FO704771.1 coding downstream 478636 45844363 ~ 45963264 (+)
XLOC_014319 utp23 coding downstream 596289 45962016 ~ 45967718 (+)
XLOC_014320 si:ch211-153f2.7 coding downstream 604965 45970692 ~ 45980732 (+)
XLOC_014302 NA non-coding upstream 1554867 43800832 ~ 43804410 (+)
XLOC_014300 NA non-coding upstream 1567701 43787003 ~ 43791576 (+)
XLOC_014301 NA non-coding upstream 1568561 43787142 ~ 43790716 (+)
XLOC_014295 CR356238.1 non-coding upstream 1693766 43665391 ~ 43665511 (+)
XLOC_014321 NA non-coding downstream 725590 46091317 ~ 46093652 (+)
XLOC_014325 NA non-coding downstream 850608 46216335 ~ 46219040 (+)
XLOC_014331 NA non-coding downstream 1057364 46423091 ~ 46438135 (+)

Expression


Co-expression Network