XLOC_014317



Basic Information


Item Value
gene id XLOC_014317
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 45727214 ~ 45728062 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030046
TACTTCTTATTCAAACTTCAAGCTGAATACCTTCAGACCCTCAAACATTTCCTTTTCACATTGTGATCATTCCCGCTTTTTCTTGAGGTCACAGAGACCGTACAGTATCCACCGAACACAGTTGAAGGTCAACAGGTACAAACTGACTCAAGACCTGAACTGCTCCCCCTACAGGACACATATCATCACataCACTAAATGAGTCAGGCAGTTTCCCTCCATAAAAAGCTAGAAAACTACAACACAGGCTTTCTCCTGCATTACAGCATGCACATATTTCAGAAGCCGCTCAGGAAATTCCTGTGAAATAATACGAGGAATTAAAATCCCAGAGCTTCTGTTGATGCTAATCACAATTAATtattgatcacacacacacacataaacacacacaaactcccgCTGACATTACAAGCCGAAGCTGCTTGATCGTAAACACAGAACAAATCTGGACAATAAACAAACTTCACATATAACCAGTACCTGCTCATCTGTTTTTCCAGAACTCAGTTGAACTAAAATAAGCCAGCCACAGGAATCCAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030046 True 543 lncRNA 0.41 2 45727214 45728062

Neighbor


gene id symbol gene type direction distance location
XLOC_014316 CT737154.1 coding upstream 218233 45508865 ~ 45508981 (+)
XLOC_014315 NA coding upstream 361487 45359277 ~ 45365727 (+)
XLOC_014314 NA coding upstream 767516 44917099 ~ 44959698 (+)
XLOC_014313 lrrc14b coding upstream 1680038 44039849 ~ 44047176 (+)
XLOC_014312 nkd3 coding upstream 1690422 44009473 ~ 44036792 (+)
XLOC_014318 FO704771.1 coding downstream 116301 45844363 ~ 45963264 (+)
XLOC_014319 utp23 coding downstream 233954 45962016 ~ 45967718 (+)
XLOC_014320 si:ch211-153f2.7 coding downstream 242630 45970692 ~ 45980732 (+)
XLOC_014321 NA coding downstream 363255 46091317 ~ 46093652 (+)
XLOC_014322 stmnd1 coding downstream 367148 46095210 ~ 46100763 (+)
XLOC_014302 NA non-coding upstream 1922804 43800832 ~ 43804410 (+)
XLOC_014300 NA non-coding upstream 1935638 43787003 ~ 43791576 (+)
XLOC_014325 NA non-coding downstream 488273 46216335 ~ 46219040 (+)
XLOC_014331 NA non-coding downstream 695029 46423091 ~ 46438135 (+)
XLOC_014334 NA non-coding downstream 1460468 47188530 ~ 47191501 (+)
XLOC_014337 CU138512.1 non-coding downstream 1578561 47306623 ~ 47306738 (+)

Expression



Co-expression Network