XLOC_014324 (cap2)


Basic Information

Item Value
gene id XLOC_014324
gene name cap2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 46158078 ~ 46210904 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028443
GTAACCTTCTCTGATTCATCCTTCTTCCCAAATATGGAGTTCCCGGAAGCGGCCGCCGGGACTCAGTTGAGTGACAGCAGGAGCCGCAGCGCCAGACCTCCTTAATATCCGATCCACATCTCGCTTTTTATAAAGAAAACGTGAGAACAAAGCCCGGACCGCACCATCTGAGGAGTGTTTGTTATGGAGGCTCTGGTTGGTCGTCTGGAGCGGGCAGTGGTGCGTCTGGAGGCTGTGGCTGTCAAACTGCAGAGCTGTCCTGGAGGATTGATCAACGGAGACATCAGCGCCGTCATCAACGGAGGTGAATCCCAGAGCATGGAGGCGTTTGACCGTCTGCTGAGCGGCTCGGTGTCTGAATATGTGCAGTCCAGTGCTGCGATTGGTGGAGACGTAGCGAAGCATGCTGAGATGGTGAATAATGCTCTGCAGGTTCAGCGCACTCTCCTCAAAATGGCCATGACACACCAGGAGCCAGCAAAGACGGAGCTGGCTGACCTCCTCAGACCTCTATCCGACCAGATCCAGGCGGTGCAGAATTTTCGTGAGAAGAACCGCGGCAGCAGCCTGTTCAACCACCTGTCTGCAGTGAGCGAGAGCATCCCTGCGCTGGGCTGGGTGGCTGTGTGTCAGAAACCAGGGCCGTATGTGAAGGAGATGAACGATGCTGCCATGTTTTATACTAATAGAGTGCTGAAAGATTTCAAAGACACTGACGCTCGTCATGTGGAGTGGGTGCGTTCATACCTGAGCATCTGGACTGACCTGCAGACGTTCATCAGAGAGCATCACTGCACTGGACTCATCTGGAGCAAGACTGGTCCAAAAGCTCCTCCCTCTCTGCTCAGtgctcctcttcttcctcctcctcctcctcctcctcctccaatGATGATTGACAGCTGCAGTTCTCCAGCAGATGCTTCATCAGTCCAGCACGCGGCTCTGTTCGCTCAGCTCAACCAGGGAGAGGAGATCACCAAAGGTTTAAAGCATGTGTGTGATGAACAGAAGACCCATAAAAACCCAAACCTGCGTTCTCAGAGTGGAAAAACACACCATGACTCTCCGTCCAAAACCCAGAGCTCTTCCTCATCTAATCCGGCCAGGAAACATCCACCCGTGCTGGAGCTGGAGGGCAAGAAGTGGAGGGTGgagtaTCAGGATCAGTGTGCAGAGCTGCTGATCGAGGACACAGAGCTCAGACAGGTGGTTTACGTCTTCAGCTGCAGCGGCTCCACACTGCAGGTCAAAGGCAAAGTCAACTCCATCATCGTGGATAACTGTAAGAAGCTGGGCCTGGTCTTTGACAATGTGGTGGGCATCGTGGAGATCATCAACTCCAGAGATATTCAGCTTCAGGTGATGGGAAAAGTTCCGACTATCTCCATAAACAAGACCGAGGGCTGCCATGTCTACCTGAGCAAGGATTCACTAGACTGTGAGATCGTCAGTGCCAAGAGCTCCGAGATGAACATCCTGGTTCCCGAGGGAGAAGATGATTATAGGGAGTTTCCAGTTCCAGAGCAGTTTAAAACGGTCTGGGACGGCTCCAGCCTGGTGACCGAGCCCACAAAGATCGCCGGCTGATTGATCTGCCTCCTCCTACCCACAATTCCTCAAGCACTTTCACTAGATCACTGTTAGCTGACACGGAAGAATCCGCACACTGTGCTTGTGGGAGTTGTAGATTTAGACAATTACAGTTATGAGCAATATATGGACAAACACGTCTGACTTCCCCAGACCCACTGTGCTTTAAACAGATCGCTGATGGATATTTTTGTCCTAAAGctgttatcattatcattatttttaccaTTATTATACATTAACAATATTTACACAGCATGATGGAACCATTATGTGTTGAATTAGGGGTGTGCGATATTTAAGGTAAGATAAGgtcataactaggcccacacggaatctgtgcgcgcagattttccacagatttttagcccatcattaattctgtttgtttacttgagtaaatgtgtgtaaatctatatttattcagttttttttttattaatttcagtaatattagtgactaatatgaaaatgttcatgtgatttatgcacaatgcagtttgtacagtcaaattttctgtcttttagtagagatattatatgagagacttgctttgttcaccaaataaagtggatctaattggatttgcattttaaacgttaaataaaagttaaaaaggtattactttttacttcacatattaaggttttagttatgatactctcaaaataatgctgatttttaccaaaattttccgcagaaatagcaaaaaacttctgcagattccgtctggccctggtcataGCTGCTGGTTTATTTATAAGCCATCTGACACAAACACACGAGTCTGAAAGCATTGACTGTGTAATGAAACTTGATCAAATGAATCCAAAAATgtcgtttttatattttaaacttatgATACAGTTCAGTATTTACACAAGCAAGAGCTAACAATGCTTgatgggtttccaccgggtgctccggtttcccacaaagacatgcggtattgaggaattgggtgagctaaattgaccgtagtgtatgtgtatgaatgagagtgtgtggatgtttcccagagatgggttgcagctggaagggcatccactgcgtaaaacatcctggataagttggcggttcattccactgtggcgaccccggataaataaagagacttagctgaaaagaaaatgaatgaaataaaaaaaatgagagATGTGATTTTTGGTCAATATCGCACACTTCTAATGTAAACATGGCAATTTTTAGGTCAGCAACTTAAACGTATTAAGTCAAAGTCATAAATAAGTTAAAATGTAACAGTACTGTATGGTGTTTGCAAAACTCATACGTTAAAACACCTTCTGGTCCTGTATTAGGtattcaaaaaattaaatattcttcAGTATATTTTACCAATACTTGAGTCTCTTGATAGATAAAACCATCCACAATCCTGTTTGATGCAGTTTCCCAGGGTTTACAGATGCTGCTTTCAGCTCATAACATTTCCTCACGCAGTAAATAATCATTGTTGTTATTTGGCTCTGGACGCAGACCCTGTGCAATCATTTGCAGAGGAGAAATGTACACTTAGTCATTTAGCAAACTATTTTCTCCAGATGGAATGAATgccaatttaaaatgaataaacatc
>TCONS_00028444
GTAACCTTCTCTGATTCATCCTTCTTCCCAAATATGGAGTTCCCGGAAGCGGCCGCCGGGACTCAGTTGAGTGACAGCAGGAGCCGCAGCGCCAGACCTCCTTAATATCCGATCCACATCTCGCTTTTTATAAAGAAAACGTGAGAACAAAGCCCGGACCGCACCATCTGAGGTAATATTTCGGAGTGTTTGTTATGGAGGCTCTGGTTGGTCGTCTGGAGCGGGCAGTGGTGCGTCTGGAGGCTGTGGCTGTCAAACTGCAGAGCTGTCCTGGAGGATTGATCAACGGAGACATCAGCGCCGTCATCAACGGAGGTGAATCCCAGAGCATGGAGGCGTTTGACCGTCTGCTGAGCGGCTCGGTGTCTGAATATGTGCAGTCCAGTGCTGCGATTGGTGGAGACGTAGCGAAGCATGCTGAGATGGTGAATAATGCTCTGCAGGTTCAGCGCACTCTCCTCAAAATGGCCATGACACACCAGGAGCCAGCAAAGACGGAGCTGGCTGACCTCCTCAGACCTCTATCCGACCAGATCCAGGCGGTGCAGAATTTTCGTGAGAAGAACCGCGGCAGCAGCCTGTTCAACCACCTGTCTGCAGTGAGCGAGAGCATCCCTGCGCTGGGCTGGGTGGCTGTGTGTCAGAAACCAGGGCCGTATGTGAAGGAGATGAACGATGCTGCCATGTTTTATACTAATAGAGTGCTGAAAGATTTCAAAGACACTGACGCTCGTCATGTGGAGTGGGTGCGTTCATACCTGAGCATCTGGACTGACCTGCAGACGTTCATCAGAGAGCATCACTGCACTGGACTCATCTGGAGCAAGACTGGTCCAAAAGCTCCTCCCTCTCTGCTCAGtgctcctcttcttcctcctcctcctcctcctcctcctccaatGATGATTGACAGCTGCAGTTCTCCAGCAGATGCTTCATCAGTCCAGCACGCGGCTCTGTTCGCTCAGCTCAACCAGGGAGAGGAGATCACCAAAGGTTTAAAGCATGTGTGTGATGAACAGAAGACCCATAAAAACCCAAACCTGCGTTCTCAGAGTGGAAAAACACACCATGACTCTCCGTCCAAAACCCAGAGCTCTTCCTCATCTAATCCGGCCAGGAAACATCCACCCGTGCTGGAGCTGGAGGGCAAGAAGTGGAGGGTGgagtaTCAGGATCAGTGTGCAGAGCTGCTGATCGAGGACACAGAGCTCAGACAGGTGGTTTACGTCTTCAGCTGCAGCGGCTCCACACTGCAGGTCAAAGGCAAAGTCAACTCCATCATCGTGGATAACTGTAAGAAGCTGGGCCTGGTCTTTGACAATGTGGTGGGCATCGTGGAGATCATCAACTCCAGAGATATTCAGCTTCAGGTGATGGGAAAAGTTCCGACTATCTCCATAAACAAGACCGAGGGCTGCCATGTCTACCTGAGCAAGGATTCACTAGACTGTGAGATCGTCAGTGCCAAGAGCTCCGAGATGAACATCCTGGTTCCCGAGGGAGAAGATGATTATAGGGAGTTTCCAGTTCCAGAGCAGTTTAAAACGGTCTGGGACGGCTCCAGCCTGGTGACCGAGCCCACAAAGATCGCCGGCTGATTGATCTGCCTCCTCCTACCCACAATTCCTCAAGCACTTTCACTAGATCACTGTTAGCTGACACGGAAGAATCCGCACACTGTGCTTGTGGGAGTTGTAGATTTAGACAATTACAGTTATGAGCAATATATGGACAAACACGTCTGACTTCCCCAGACCCACTGTGCTTTAAACAGATCGCTGATGGATATTTTTGTCCTAAAGctgttatcattatcattatttttaccaTTATTATACATTAACAATATTTACACAGCATGATGGAACCATTATGTGTTGAATTAGGGGTGTGCGATATTTAAGGTAAGATAAGgtcataactaggcccacacggaatctgtgcgcgcagattttccacagatttttagcccatcattaattctgtttgtttacttgagtaaatgtgtgtaaatctatatttattcagttttttttttattaatttcagtaatattagtgactaatatgaaaatgttcatgtgatttatgcacaatgcagtttgtacagtcaaattttctgtcttttagtagagatattatatgagagacttgctttgttcaccaaataaagtggatctaattggatttgcattttaaacgttaaataaaagttaaaaaggtattactttttacttcacatattaaggttttagttatgatactctcaaaataatgctgatttttaccaaaattttccgcagaaatagcaaaaaacttctgcagattccgtctggccctggtcataGCTGCTGGTTTATTTATAAGCCATCTGACACAAACACACGAGTCTGAAAGCATTGACTGTGTAATGAAACTTGATCAAATGAATCCAAAAATgtcgtttttatattttaaacttatgATACAGTTCAGTATTTACACAAGCAAGAGCTAACAATGCTTgatgggtttccaccgggtgctccggtttcccacaaagacatgcggtattgaggaattgggtgagctaaattgaccgtagtgtatgtgtatgaatgagagtgtgtggatgtttcccagagatgggttgcagctggaagggcatccactgcgtaaaacatcctggataagttggcggttcattccactgtggcgaccccggataaataaagagacttagctgaaaagaaaatgaatgaaataaaaaaaatgagagATGTGATTTTTGGTCAATATCGCACACTTCTAATGTAAACATGGCAATTTTTAGGTCAGCAACTTAAACGTATTAAGTCAAAGTCATAAATAAGTTAAAATGTAACAGTACTGTATGGTGTTTGCAAAACTCATACGTTAAAACACCTTCTGGTCCTGTATTAGGtattcaaaaaattaaatattcttcAGTATATTTTACCAATACTTGAGTCTCTTGATAGATAAAACCATCCACAATCCTGTTTGATGCAGTTTCCCAGGGTTTACAGATGCTGCTTTCAGCTCATAACATTTCCTCACGCAGTAAATAATCATTGTTGTTATTTGGCTCTGGACGCAGACCCTGTGCAATCATTTGCAGAGGAGAAATGTACACTTAGTCATTTAGCAAACTATTTTCTCCAGATGGAATGAATgccaatttaaaatgaataaacatcaataaaaataaa
>TCONS_00028445
AGTTGAGTGACAGCAGGAGCCGCAGCGCCAGACCTCCTTAATATCCGATCCACATCTCGCTTTTTATAAAGAAAACGTGAGAACAAAGCCCGGACCGCACCATCTGAGGAGTGTTTGTTATGGAGGCTCTGGTTGGTCGTCTGGAGCGGGCAGTGGTGCGTCTGGAGGCTGTGGCTGTCAAACTGCAGAGCTGTCCTGGAGGATTGATCAACGGAGACATCAGCGCCGTCATCAACGGAGGTGAATCCCAGAGCATGGAGGCGTTTGACCGTCTGCTGAGCGGCTCGGTGTCTGAATATGTGCAGTCCAGTGCTGCGATTGGTGGAGACGTAGCGAAGCATGTAAGTCTGAGTGACTGTAAATATCTGTCTGTGCTGATTTTACAGATGGAGGATGAGCAGAGGCAGATAATACAGGAGTGAACTCATTCTCCTGTAAGAGCTCTTAGTTTACAGTAGTGAAGTACGACTCAGGGCTCACAGCTGCTGCGAATCCGGCTTCACATTACCCTGCTATATTTGACAATCGGCTTCTCTGGAGCCACTGGAGCTACCACAATCCTACAGAACTGAAGCCTGGCTCACACTGAATACGTTTACACGGACACCTATGctt

Function

symbol description
cap2 Predicted to enable actin binding activity and adenylate cyclase binding activity. Predicted to be involved in cAMP-mediated signaling; cell morphogenesis; and regulation of adenylate cyclase activity. Predicted to act upstream of or within cytoskeleton organization. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm. Is expressed in central nervous system; heart; male organism; muscle; and neural tube. Orthologous to human CAP2 (cyclase associated actin cytoskeleton regulatory protein 2).

GO:

id name namespace
GO:0008154 actin polymerization or depolymerization biological_process
GO:0045761 regulation of adenylate cyclase activity biological_process
GO:0000902 cell morphogenesis biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0007163 establishment or maintenance of cell polarity biological_process
GO:0030864 cortical actin cytoskeleton cellular_component
GO:0008179 adenylate cyclase binding molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1758 Predicted to enable actin binding activity and adenylate cyclase binding activity. Predicted to be involved in cAMP-mediated signaling; cell morphogenesis; and regulation of adenylate cyclase activity. Predicted to act upstream of or within cytoskeleton organization. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm. Is expressed in central nervous system; heart; male organism; muscle; and neural tube. Orthologous to human CAP2 (cyclase associated actin cytoskeleton regulatory protein 2).

Ensembl:

ensembl_id ENSDARG00000104478

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028443 False 3191 mRNA 0.44 13 46158078 46210892
TCONS_00028444 False 3214 mRNA 0.44 13 46158078 46210904
TCONS_00028445 True 615 lncRNA 0.51 3 46158142 46172318

Neighbor

gene id symbol gene type direction distance location
XLOC_014323 rbm24a coding upstream 9101 46113828 ~ 46148977 (+)
XLOC_014322 stmnd1 coding upstream 57315 46095210 ~ 46100763 (+)
XLOC_014321 NA coding upstream 64426 46091317 ~ 46093652 (+)
XLOC_014320 si:ch211-153f2.7 coding upstream 177346 45970692 ~ 45980732 (+)
XLOC_014319 utp23 coding upstream 190360 45962016 ~ 45967718 (+)
XLOC_014325 NA coding downstream 5431 46216335 ~ 46219040 (+)
XLOC_014326 vps28 coding downstream 11524 46222428 ~ 46238624 (+)
XLOC_014327 mapk15 coding downstream 29267 46240171 ~ 46303622 (+)
XLOC_014328 rprd1a coding downstream 98649 46309553 ~ 46333810 (+)
XLOC_014329 slc30a8 coding downstream 132481 46343385 ~ 46362232 (+)
XLOC_014317 NA non-coding upstream 430016 45727214 ~ 45728062 (+)
XLOC_014316 CT737154.1 non-coding upstream 649097 45508865 ~ 45508981 (+)
XLOC_014315 NA non-coding upstream 792351 45359277 ~ 45365727 (+)
XLOC_014314 NA non-coding upstream 1198380 44917099 ~ 44959698 (+)
XLOC_014331 NA non-coding downstream 212187 46423091 ~ 46438135 (+)
XLOC_014334 NA non-coding downstream 977626 47188530 ~ 47191501 (+)
XLOC_014337 CU138512.1 non-coding downstream 1095719 47306623 ~ 47306738 (+)
XLOC_014339 NA non-coding downstream 1126678 47337582 ~ 47338157 (+)

Expression


Co-expression Network