XLOC_014331


Basic Information

Item Value
gene id XLOC_014331
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 46423091 ~ 46438135 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030049
AAAAGCTCAATAGGACAATGaagGTATTATTAAGCATCATTATCTGTGATGCAGAACgcagatgagatcaagatcagCTTGAGGAAGTTCAgcctctcattcattcattcagcagcCCGCCAGAATCTGCTCCGAAGACTCCGCCAATCGCTGTGTTCATTTATATCCTCCATCGCTCAGTGAACAGACTCGCAATGATGAAGCGTAGCTGAAGGGCCGAGATCTGCTATTCCCATCCCTGCACTTCAGCTGGAGGAGGAGACGACGCTCAACTCAAGAAACAAAAGCCAAACGCTCAGCAGTCGAGTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030049 True 309 lncRNA 0.48 2 46423091 46438135

Neighbor

gene id symbol gene type direction distance location
XLOC_014330 med30 coding upstream 11733 46372115 ~ 46411358 (+)
XLOC_014329 slc30a8 coding upstream 60859 46343385 ~ 46362232 (+)
XLOC_014328 rprd1a coding upstream 89281 46309553 ~ 46333810 (+)
XLOC_014327 mapk15 coding upstream 119469 46240171 ~ 46303622 (+)
XLOC_014326 vps28 coding upstream 184467 46222428 ~ 46238624 (+)
XLOC_014332 AL953858.1 coding downstream 386588 46824723 ~ 46825683 (+)
XLOC_014333 si:ch211-229b6.1 coding downstream 697542 47135677 ~ 47137425 (+)
XLOC_014334 NA coding downstream 750395 47188530 ~ 47191501 (+)
XLOC_014335 tpmt.1 coding downstream 852152 47290287 ~ 47298657 (+)
XLOC_014336 tpmt.2 coding downstream 861031 47299166 ~ 47309383 (+)
XLOC_014325 NA non-coding upstream 204051 46216335 ~ 46219040 (+)
XLOC_014321 NA non-coding upstream 329439 46091317 ~ 46093652 (+)
XLOC_014317 NA non-coding upstream 695029 45727214 ~ 45728062 (+)
XLOC_014316 CT737154.1 non-coding upstream 914110 45508865 ~ 45508981 (+)
XLOC_014315 NA non-coding upstream 1057364 45359277 ~ 45365727 (+)
XLOC_014337 CU138512.1 non-coding downstream 868488 47306623 ~ 47306738 (+)
XLOC_014339 NA non-coding downstream 899447 47337582 ~ 47338157 (+)
XLOC_014341 NA non-coding downstream 1000069 47438204 ~ 47448594 (+)
XLOC_014344 CU695215.2 non-coding downstream 1136480 47574615 ~ 47574823 (+)

Expression


Co-expression Network