XLOC_014333 (si:ch211-229b6.1)


Basic Information

Item Value
gene id XLOC_014333
gene name si:ch211-229b6.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47135677 ~ 47137425 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028457
taatgggctatatgcacgcaTTACTTCCGCGTTTTGTCTAAGGCCGCGGTCCAGCTTCCGGTCCGGGTGATTTCAAGCGGAGGTTAGCAGTATTATGGCAGAGTCGTCAATTATTTACTCGCTGTTTGCGAGAAAATTATGGTCAACGATGTGCATATGATTGTCCGGATGTGCTCTACAACACCGCAGAGCAAACTTGAGAAAGGTTTCAAGTTTTATGCATCTTCCTACCTGTGCAATTATGAAGGTAACATTATGAGATTCAGAGCTAGAAATTTTTGTGTGTTACTTCATCCTGGAGCGGACATCCGTCAGAAGATCCATGCCATCGTCTGCTAGTTAATAGCTCCTGCTCTTATGTGGCTGAGAGtgggatatgcaaacatttggttgctttgcttttccagacagcccaatactctgaaatgtgtaatgtgagttgtcacatgaacaattgtttggaatggatcaattatgtgttaagttccatgaaacagatgggtgtttatttatttatttaatacgtaTCAGCCCAAATACCTCTCTATGCACAAGTTACAGAAGAAGCACCTGATTCAagaaaacaactgattcattgttattgtttctgttcatctgaataaaatatttttttcaaaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-311 No description available

Ensembl:

ensembl_id ENSDARG00000093422

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028457 True 639 mRNA 0.40 2 47135677 47137425

Neighbor

gene id symbol gene type direction distance location
XLOC_014332 AL953858.1 coding upstream 309994 46824723 ~ 46825683 (+)
XLOC_014331 NA coding upstream 697542 46423091 ~ 46438135 (+)
XLOC_014330 med30 coding upstream 724319 46372115 ~ 46411358 (+)
XLOC_014329 slc30a8 coding upstream 773445 46343385 ~ 46362232 (+)
XLOC_014328 rprd1a coding upstream 801867 46309553 ~ 46333810 (+)
XLOC_014334 NA coding downstream 51105 47188530 ~ 47191501 (+)
XLOC_014335 tpmt.1 coding downstream 152862 47290287 ~ 47298657 (+)
XLOC_014336 tpmt.2 coding downstream 161741 47299166 ~ 47309383 (+)
XLOC_014337 CU138512.1 coding downstream 169198 47306623 ~ 47306738 (+)
XLOC_014338 ext1c coding downstream 173595 47311020 ~ 47336408 (+)
XLOC_014325 NA non-coding upstream 916637 46216335 ~ 46219040 (+)
XLOC_014321 NA non-coding upstream 1042025 46091317 ~ 46093652 (+)
XLOC_014317 NA non-coding upstream 1407615 45727214 ~ 45728062 (+)
XLOC_014316 CT737154.1 non-coding upstream 1626696 45508865 ~ 45508981 (+)
XLOC_014339 NA non-coding downstream 200157 47337582 ~ 47338157 (+)
XLOC_014341 NA non-coding downstream 300779 47438204 ~ 47448594 (+)
XLOC_014344 CU695215.2 non-coding downstream 437190 47574615 ~ 47574823 (+)

Expression


Co-expression Network