XLOC_014334


Basic Information

Item Value
gene id XLOC_014334
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47188530 ~ 47191501 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030050
TAGTGTTGTTTTAACTTACAGGTACAATACTGTCTGCTTTTGtacaactaaacaaaaaaaaagaaaagaaacaaaagaatttaccatttcattctgctgtgcgAACACAAAACCGCGACTCGGGCCGgtctgccgtctagagccacagACATCTGCACGCTTCCAAATGGTAGGCACTTTTAAGGCAAggtttaaaacatttgtgaatatacatttatatataattctaTATAGATTTCCCCATACATGAATAAGTAATCGGATGCGAAGGTCAGATGTCTACTCAATAAAACCAAACTAACAGCTAACAATCAAAGAAAACAACCAATAAAACAGAACCTTGACTGTGGCCGAAGGATTACGCAGCAATAATGTGAAAATCAAACGAGTctttggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggccagaAAGCTCACTTCAGTCGACAGACCGAGTTTAATCTAATTATAccggttttaaaaatgtttagagtCGCCAAACTGGCCGATCAGCCTCATTTCAGCTCTTTCACACCATTCCAAACTCGTCCACCGCTGGAAAACGAGCTCAGAAATAAGAAATTCaatgttttttcccccaattggGACGCTACGATGTAAAAGAATATCCATAATGAGCAGTTTTCTCTATTTGGCGATTCCTATTTTCATGTTTCCTCGTTTAGTTTTGCTTTTGCATTGTAgtatgggatcttgatctctcCTCCTGCAACTTTTCAtcttaaaaatatcaaaataaggacttttattgtcattattaatattctgcagtgctgtattgtcttGACTATATTAACACTACAAACACCCTGAAGTAAACttccagcacattttctgttcttCTACACACTTATTCCTCTATTTCTTATACTTTGTATGATTATAGCTCCTCCAtcaacaaacaccttgtaatgacctgcagcagattttctgttattttacacacctATTCCTCCAAAtattacacattatattatttaaagctactaaaatgtcaataaaagtcactttgttcaactgtagagttgaattctcaacatcagaagtggacagagcagagatcaacatcccataatgcaattcaccactgCAAATAAACCCAATAAACACACTAAATATGGATATTGCTAATCAGCAGTGTGGATAGTTTGGGCCGCTTAACAGTACAGATCAGCTCTACTTTCTGCAGGAGCTCATAAAACAGAtcaccggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgatcTTTTCATCCATGATCAAAGCAAACGCAATACGGGGCTCCAGAAATCAGCCTGGGTTTCTTCATCTAACAGACGAGAGCTGCTGATCTATGCGAGGTTTTAAATGGCACTGCTTGATTTATTTGACCTACAAACACTGGCGAACGCAACGCACGGGTCTTTAAACAGATTATCAGCTCTGAGCACCAACAAAACTCATAAACTGAGCGGGGAAACATTGAGACATTGGCTTGGGAAAACTACAGAAAGgcaattttttttgttcaacatcTGAGATAATGATAAATTAATGAAACACTTTGATGATGAGCAACCATCAGACATGCTGGGAACCTAAATAAATGAGCCGAAATCAAAATCAGGATGATGAGAAATGAAATCAGGACTGATACAGAACAATTATACGCAATTATTCCACTTTAAAATGTCGTCTTTACAAATACATACTGCTACAGTTAAAAAGTAGTCAGCGACTAAAAACAGCTGCTTTGACAGAAGACGGATGCAGAAATCCTCAGCTTTACACATCTGCTCCTTTCTTTCTCAGCCGTTTCGATACACGTTTAAATACAGAGAGATTTTGCTTGCGCTCTTGTTTGTTTTCGTcataaaaaaagaggaaagaaaaGGTCTTAATTACAATACTCTATGCCAAAAGCTTTccttaatgttatttattttttcctcaatcaTTTCTTTTAATAATGCAGAAGGAGTTTGTCGTAGTCACTGATATTGAAGTCATTTTATGCGTAAAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0048468 cell development biological_process
GO:0022604 regulation of cell morphogenesis biological_process
GO:0007508 larval heart development biological_process
GO:0006935 chemotaxis biological_process
GO:0030154 cell differentiation biological_process
GO:0000902 cell morphogenesis biological_process
GO:0000904 cell morphogenesis involved in differentiation biological_process
GO:0031290 retinal ganglion cell axon guidance biological_process
GO:0090596 sensory organ morphogenesis biological_process
GO:0030182 neuron differentiation biological_process
GO:0048812 neuron projection morphogenesis biological_process
GO:0009887 animal organ morphogenesis biological_process
GO:0007275 multicellular organism development biological_process
GO:0120035 regulation of plasma membrane bounded cell projection organization biological_process
GO:0120036 plasma membrane bounded cell projection organization biological_process
GO:0120039 plasma membrane bounded cell projection morphogenesis biological_process
GO:0031344 regulation of cell projection organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0031346 positive regulation of cell projection organization biological_process
GO:0048856 anatomical structure development biological_process
GO:0048858 cell projection morphogenesis biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0032990 cell part morphogenesis biological_process
GO:0010769 regulation of cell morphogenesis involved in differentiation biological_process
GO:0050767 regulation of neurogenesis biological_process
GO:0097485 neuron projection guidance biological_process
GO:0061564 axon development biological_process
GO:0002164 larval development biological_process
GO:0030030 cell projection organization biological_process
GO:0048666 neuron development biological_process
GO:0048667 cell morphogenesis involved in neuron differentiation biological_process
GO:0008038 neuron recognition biological_process
GO:0007399 nervous system development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0007409 axonogenesis biological_process
GO:0007411 axon guidance biological_process
GO:0045664 regulation of neuron differentiation biological_process
GO:0060284 regulation of cell development biological_process
GO:0042330 taxis biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0031175 neuron projection development biological_process
GO:0051960 regulation of nervous system development biological_process
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030050 True 2079 lncRNA 0.38 2 47188530 47191501

Neighbor

gene id symbol gene type direction distance location
XLOC_014333 si:ch211-229b6.1 coding upstream 51105 47135677 ~ 47137425 (+)
XLOC_014332 AL953858.1 coding upstream 362847 46824723 ~ 46825683 (+)
XLOC_014331 NA coding upstream 750395 46423091 ~ 46438135 (+)
XLOC_014330 med30 coding upstream 777172 46372115 ~ 46411358 (+)
XLOC_014329 slc30a8 coding upstream 826298 46343385 ~ 46362232 (+)
XLOC_014335 tpmt.1 coding downstream 98786 47290287 ~ 47298657 (+)
XLOC_014336 tpmt.2 coding downstream 107665 47299166 ~ 47309383 (+)
XLOC_014337 CU138512.1 coding downstream 115122 47306623 ~ 47306738 (+)
XLOC_014338 ext1c coding downstream 119519 47311020 ~ 47336408 (+)
XLOC_014339 NA coding downstream 146081 47337582 ~ 47338157 (+)
XLOC_014325 NA non-coding upstream 969490 46216335 ~ 46219040 (+)
XLOC_014321 NA non-coding upstream 1094878 46091317 ~ 46093652 (+)
XLOC_014317 NA non-coding upstream 1460468 45727214 ~ 45728062 (+)
XLOC_014316 CT737154.1 non-coding upstream 1679549 45508865 ~ 45508981 (+)
XLOC_014341 NA non-coding downstream 246703 47438204 ~ 47448594 (+)
XLOC_014344 CU695215.2 non-coding downstream 383114 47574615 ~ 47574823 (+)
XLOC_014345 NA non-coding downstream 398528 47590029 ~ 47591236 (+)

Expression


Co-expression Network