XLOC_014339



Basic Information


Item Value
gene id XLOC_014339
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47337582 ~ 47338157 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030051
GTGACTCAATGTAATTTGTCAGTGAATTGAATCAAATTGAATCAATCATTAAGTGAATCGTTACattaatgttgaggcTGCAGTTGTGTTTTCAATAACTCAATGGAGTTTGTCAGTGAATTGTTCCAAATTGAATCAATAGTTGAGTGAATCATTCCATCAATATTGAAGCTACAGTTTTGTTTTCAGTGACTCAGAGTTTGTCACTGAATTGAATCAATCATTGAGTGAATCGTTACATCAGTATTGAAGATACAGTTTTGGTTTCAGTGACTCAGTGGAGTTTGTCAGTGAATTGAATCAATCATTGAGTGAATCGTTACATCAGTATTGACAAATTGAATCATTAAATCACTATTAAAGCTGCAGTTTggaaattcatgttttttttcacctgaaaaataacaaactaaacatCTTGGATGACGAGGAGTAGAGTAAATAATTAAGAAATGTTCATTCTGGAAGTAAAGCGGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030051 True 477 lncRNA 0.32 2 47337582 47338157

Neighbor


gene id symbol gene type direction distance location
XLOC_014338 ext1c coding upstream 1174 47311020 ~ 47336408 (+)
XLOC_014336 tpmt.2 coding upstream 28199 47299166 ~ 47309383 (+)
XLOC_014337 CU138512.1 coding upstream 30844 47306623 ~ 47306738 (+)
XLOC_014335 tpmt.1 coding upstream 38925 47290287 ~ 47298657 (+)
XLOC_014334 NA coding upstream 146081 47188530 ~ 47191501 (+)
XLOC_014340 psmb2 coding downstream 56113 47394270 ~ 47423628 (+)
XLOC_014341 NA coding downstream 100047 47438204 ~ 47448594 (+)
XLOC_014342 zgc:114119 coding downstream 138751 47476908 ~ 47481618 (+)
XLOC_014343 CU695215.3 coding downstream 164424 47502581 ~ 47523302 (+)
XLOC_014344 CU695215.2 coding downstream 236458 47574615 ~ 47574823 (+)
XLOC_014331 NA non-coding upstream 899447 46423091 ~ 46438135 (+)
XLOC_014325 NA non-coding upstream 1118542 46216335 ~ 46219040 (+)
XLOC_014321 NA non-coding upstream 1243930 46091317 ~ 46093652 (+)
XLOC_014345 NA non-coding downstream 251872 47590029 ~ 47591236 (+)
XLOC_014346 NA non-coding downstream 444935 47783092 ~ 47787275 (+)
XLOC_014347 NA non-coding downstream 459732 47797889 ~ 47800811 (+)

Expression



Co-expression Network