XLOC_014341



Basic Information


Item Value
gene id XLOC_014341
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 47438204 ~ 47448594 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030052
AGAGCAGAGATCGTGGAGCCGTTCAGCTTGGATGGTAGTGGAACTGCAGGAAGACGCAGAGCAAGATTAGCCTTAATCACACATTTGTGTGGCGCATCTGTGTGGGCTGGATCTTCAGTACGACTGGGAGAGGAAGAAAAAGGCTGTTTCTGGAAAATCAGCTGAATGAATGATGGGAAGAGCTGCGGGGTGGAAGAGGTGACATCCCAGCGCTGATAAAAACAGCCCCAGAGATCACATGCAGACTCTCACCTTTCTTGATGACGGAGTGATCCAGGATGCCCAGCGCTGAGGCCTCCTCCAGACCCTGCACAACACAGCAGCATGGTAAATAAGCTCAGCTAAATAAACAGTCATTGCATTGGACTCTAAAAAGGCTTAATGCTGGG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030052 True 389 lncRNA 0.50 3 47438204 47448594

Neighbor


gene id symbol gene type direction distance location
XLOC_014340 psmb2 coding upstream 14576 47394270 ~ 47423628 (+)
XLOC_014339 NA coding upstream 100047 47337582 ~ 47338157 (+)
XLOC_014338 ext1c coding upstream 101796 47311020 ~ 47336408 (+)
XLOC_014336 tpmt.2 coding upstream 128821 47299166 ~ 47309383 (+)
XLOC_014337 CU138512.1 coding upstream 131466 47306623 ~ 47306738 (+)
XLOC_014342 zgc:114119 coding downstream 28314 47476908 ~ 47481618 (+)
XLOC_014343 CU695215.3 coding downstream 53987 47502581 ~ 47523302 (+)
XLOC_014344 CU695215.2 coding downstream 126021 47574615 ~ 47574823 (+)
XLOC_014345 NA coding downstream 141435 47590029 ~ 47591236 (+)
XLOC_014346 NA coding downstream 334498 47783092 ~ 47787275 (+)
XLOC_014334 NA non-coding upstream 246703 47188530 ~ 47191501 (+)
XLOC_014331 NA non-coding upstream 1000069 46423091 ~ 46438135 (+)
XLOC_014325 NA non-coding upstream 1219164 46216335 ~ 46219040 (+)
XLOC_014347 NA non-coding downstream 349295 47797889 ~ 47800811 (+)
XLOC_014348 CABZ01005379.1 non-coding downstream 390009 47838603 ~ 47843652 (+)

Expression



Co-expression Network