XLOC_014470 (CU861574.1)


Basic Information

Item Value
gene id XLOC_014470
gene name CU861574.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 3991835 ~ 3995436 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028653
ATGCCACCGAGAGAACACCCTTGTGCTATTTTAGGATGTAAGGCTCAGCACAAGAGCCTTCACCGTCTTCCTGCAAATGAGCAACAGAGGCTTAAGTGGCTGAGTTTTATCTTTGAAGACAAGGTGCCTGAAAATGTACCAAAACTGTTGTATGTTTGCGCTAACCACTTTAGCGTAGACTGCCTCGAGAACGCGGGACAATACAACTCCGGATTCGCgagtaaattgtttttgaaaactggaTCAGTTCCTACAATACGTGATCCTGTCTCACTTCAAGCCACGACGTCGACAAAGAGCAACAAGGTGGATGTAGCTTGCCAGACAGAACCTTTTCACACATCTTTACACAGTGTTGGCACCCAGTTGTCTTTTAGGACGCTTCAGGCTAAACGCAGGAGTACAAGTGTCCAGACAACAATATCCAGTTTTGAACTGACTGTGCCATCAGCGTCCTCTACTGCGTTTATGACTTCGACACCCCTCAAACCTTCACTAAAAAGACCTCGTCTggagctggaggaggaggaggaagaagaagaagccgAAGAGACTTTGACAGAGTCAAAAATTATAGCCCAAGACTCGGATGTGACATTTGACCCTGCAGAGGAATGCACATCTGCAACTGAACCAACAGACTTGTCaatccAAGAATGCCCAGTTCATAACATTGCCAAGTTCATTGTCTATGAAACATGCCTCATGGAGCTCTTCAGTGACTGCCCAGTGTGTCAGAGGAGATGTGATGTAAAGTCACAAAGGCTTGGGACATTTCTGAGCGTACAGCAAGTCTGCCCACACTGCGAGTTTGTAAGAAAATGGAACAGTCAGCCAATTATTGGTAGTACTCCAGCTGGCAACCTGCATCTTTCTGCTGCAGTCTACTTGAGCGGTGCATCATTTTTTGTAGTTGAAAAGGTATTTGCTGCAATGaaactacacatttttaaatataattcatttcgCCGTCATGCAAGACTTTGCATTGAACCTgctattgtccacaagtggagaAATTGGCAGAGTGAAATGCTAGAACAGCTCAGTCGAAGAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGTGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTTGGATGCCCGCGGTGTTCGTCTGGAATGCATCATCACAGACCGACAtcctcaaatacagaaatacctCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTCCAAAAAACTGGACAAGATATGCCAGATAAAGGGTTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCCGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATTCTATAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACGTCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTCCCTTTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113654

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028653 True 1854 mRNA 0.46 10 3991835 3995436

Neighbor

gene id symbol gene type direction distance location
XLOC_014468 si:ch73-281i18.6 coding downstream 65949 3919591 ~ 3925886 (-)
XLOC_014467 si:ch73-281i18.7 coding downstream 75760 3909980 ~ 3916075 (-)
XLOC_014466 si:ch73-281i18.4 coding downstream 85466 3900129 ~ 3906369 (-)
XLOC_014465 si:ch73-281i18.3 coding downstream 95321 3890506 ~ 3896514 (-)
XLOC_014464 thrap3b coding downstream 104844 3865210 ~ 3886991 (-)
XLOC_014471 stpg1 coding upstream 21266 4016702 ~ 4023050 (-)
XLOC_014472 fhl3b coding upstream 94058 4089494 ~ 4118375 (-)
XLOC_014473 rragcb coding upstream 131469 4126905 ~ 4137087 (-)
XLOC_014474 CU570886.1 coding upstream 208809 4204245 ~ 4204359 (-)
XLOC_014475 NA coding upstream 451317 4446753 ~ 4449906 (-)
XLOC_014711 CR382300.3 misc upstream 15733254 19728690 ~ 19728755 (-)
XLOC_014459 CT030005.2 non-coding downstream 230432 3760178 ~ 3761403 (-)
XLOC_014455 NA non-coding downstream 276922 3602024 ~ 3714913 (-)
XLOC_014437 NA non-coding downstream 1072179 2916941 ~ 2919656 (-)
XLOC_014434 NA non-coding downstream 1229680 2756239 ~ 2762155 (-)
XLOC_014432 NA non-coding downstream 1254800 2727176 ~ 2737035 (-)
XLOC_014476 CT583670.1 non-coding upstream 485747 4481183 ~ 4481297 (-)
XLOC_014477 NA non-coding upstream 543365 4538801 ~ 4560795 (-)
XLOC_014478 NA non-coding upstream 682806 4678242 ~ 4686631 (-)

Expression


Co-expression Network