XLOC_014516


Basic Information

Item Value
gene id XLOC_014516
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 6892715 ~ 6901336 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030149
AATACAtgcaaattatattcatatcccACATCGAGTACAGggaatgtgaagtttcagcttttCTTTCATGTCCCCAGTGTGTTCTCGTGTAACTTTTGAAAGGCCTTGTTTCATTCTAAAACTATTTCTATGCCAAGTGCAGGCTTCACTTCAGTGTGAACTGTCATGTGGGATATGAGCTTCTGTTTCaatctgaaactctttccacactgagagcAAGTGAAAGGGTTTTGTCCAGTGTGAATTCTAGTGTGAACGTCAAGACACTGTTTTTCTCTGAAAcactttccacactgttggcatctGTAAGGCTTCTCTCCCGTATGAATTTTCATGTGCCTTTCAAGTttgtgtttctctgtaaaactctttccacactgttggcaggtgtaaagcttttctccagtgtgaatcctcatgtgaatGTCCAGGCTTTGCTTCAATGTAAAACTCTTTTTACAGTGCTGGCAAATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030149 True 474 lncRNA 0.40 2 6892715 6901336

Neighbor

gene id symbol gene type direction distance location
XLOC_014515 CABZ01029822.1 coding downstream 19608 6856589 ~ 6873107 (-)
XLOC_014514 tcf19l coding downstream 52209 6834380 ~ 6840506 (-)
XLOC_014513 NA coding downstream 62898 6801438 ~ 6829817 (-)
XLOC_014512 pvrl2l coding downstream 117844 6606197 ~ 6774871 (-)
XLOC_014511 NA coding downstream 296098 6592036 ~ 6596617 (-)
XLOC_014518 znf384l coding upstream 59052 6960388 ~ 6988866 (-)
XLOC_014519 daxx coding upstream 113119 7014455 ~ 7033670 (-)
XLOC_014520 tapbp.1 coding upstream 137358 7038694 ~ 7043355 (-)
XLOC_014521 tapbp.2 coding upstream 164652 7065988 ~ 7070691 (-)
XLOC_014522 psmb8a coding upstream 204502 7105838 ~ 7144585 (-)
XLOC_014711 CR382300.3 misc upstream 12827354 19728690 ~ 19728755 (-)
XLOC_014505 NA non-coding downstream 909393 5968523 ~ 5983322 (-)
XLOC_014503 LO018585.1 non-coding downstream 1049510 5843091 ~ 5843205 (-)
XLOC_014501 CU207217.2 non-coding downstream 1118680 5773921 ~ 5774035 (-)
XLOC_014531 BX927401.2 non-coding upstream 566865 7468201 ~ 7468316 (-)
XLOC_014533 BX927401.1 non-coding upstream 599734 7501070 ~ 7501739 (-)
XLOC_014534 NA non-coding upstream 611782 7513118 ~ 7513678 (-)
XLOC_014537 CT573133.1 non-coding upstream 658584 7559920 ~ 7576117 (-)
XLOC_014538 NA non-coding upstream 663637 7564973 ~ 7567310 (-)

Expression


Co-expression Network