XLOC_014523 (col11a2)


Basic Information

Item Value
gene id XLOC_014523
gene name col11a2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 7179740 ~ 7225206 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028739
cacacacacacacacacacgctccccTGCATTTCGTGGGAGAAAGTAagaagagggagagagaaagagagagattgagagaGAGTGATTTGAAGCCTCTCTCTGCTCTCTCCGCTTTTCTGTTCTCTCAGACTCAATGGGGCTCTAGCAAAAGGGATTTCAAGCTGTAAAACTACATATTTATTACCCGAACCCTTCTTTCTATTTAAGTTTTGTACATAGCACAGATAACTTATTGAAGAACAAGTCAAACCAAACCCGTCAAAAAACTTGGGAACTATGGATATTCGGAAGAAGCGGAGGCCGTGGTGCATGGAGACCTCGTTTGTGCTCCTCCTGTGCCTTTCTATGGCACAAGCAGATCCAGTAGATGTTTTGCGGGTGCTGCAGTTGCCTTCCCTTCCTGAAGGTGTGCAGAAGGTTCCGGGTTTCTGTACCTCCCGATTGTCTGGGACTCCTGATCATGCCTACCGCATCACTAAAAAAGCCCAGATCTCTGCCCCCACCAAACAGCTATTCTCAGGACGTTTCCCGGAGAACTTCTCCATCATGACTCTGGTAAAGGCCAAGGCTGGTCTTCAAGCCTTCCTGTTGTCCATCTATAATGAGCAGGGTGTGCAGCAGCTTGGGCTGGAGCTGGGACGCTCACCCATCTTCCTGTATGAGGACCAGCATCGCAAACCTGCCCCAGAGGACTACCCACTGTTCAAAGGCGTCAACCTGGCTGACGGCAAGTGGCACCGCATTGCCATTTCTGTGCAGAAGAAGAACATCACTCTGATCCTGGACTGCAAGAATCGCATCACCAAAACTCTGCCAAGGAGCAACAACCCAGTGTTGGACACCAAGGGCATCACTGTTTTTGGAGCCCGTCTCCTGGATGAGGAGGTTTTCCAGGGTGAGATCCAGCAGCTGCTGATCGCATCCAACCCTCAGGCCGCATATGACTTCTGTGAGCATTACAGCCCTGACTGCGACTCTCCTCTGCCCAAAGTCCAGTCCCAGGACCCAAACACCTATCGCAGGTCAAAGCACAACCAACCAAAAGCAAGACAGACAAAACGAAAGCCAATGCGTCCCCCGCAAAACCAAAAGACACCAAAGCCAAAGCAGCCTCCGTCACTCAAAAACCTGCTAAATTTCCCACCCTTCGACAAGGCTGTTGCCTCAGTGCGAGCCATTAAGGGAGAGAAGGGAGAGCCTGCTGTCCTTGAACCTGGCATGCTGATTGAAGGACCACCAGGACCAGAAGGACCAGCAGGTCTCCCTGGCCCCTCTGGCCCCCAAGGACAACCTGGTTCTGTTGGTGATCCTGGTGAGAGGGGTCCTACTGGTAAGGCTGGTCTACCTGGAGCAGATGGTGTTCCAGGACCTCCAGGAACCTCTGTCATGCTTCCTTTCCGCTTTGGACAGAGCGCTGGAGAGAAAGGACCTGTTGCCTCTGCACAGGAAGCCCAAGCTCAAGCCATTCTGTCTCAAGCTCGGCTTGCCCTGAAAGGACCATCCGGGCCAATGGGTTTCACTGGCCGTCCTGGacctttgGGAACACCTGGAAGTCCTGGCTTTAAGGGAGAAAGGGGGGACCCTGGTGCTCAGGGTCCTAGAGGTCCTCAGGGTGTGTCTGGTCCTCCTGGCAAAGCTGGTCGGAGGGGTCGCGCTGGTGCTGATGGAGCCAGAGGGATGCCAGGAGAGTCTGGAATTAAGgGTGACCGTGGTTTTGATGGCCTTCCTGGTTTGCCTGGTGACAAGGGTTATCGGGGTCAACCTGGAGGAATGGGACCCCCAGGACCACATGGAGAGGACGGAGAGAGGGGAGATGATGGAGATGTTGGACCCAGAGGTCTTCCTGGCGAACCTGGACCCCGTGGTTTGTTGGGGCCTAAAGGGCCTTCTGGACTTCCTGGACCTCCTGGTGTTCGTGGAAATGATGGTCCACATGGTCCAAAAGGAAACTTAGGACCACAAGGAGAGCCCGGTCCTCCAGGCCAGCAGGGGGCTCCAGGAACACAGGGAATGCCAGGTCCACAGGGTGCCACTGGACCACCAGGAGAGAAAGGACCCACAGGAAAGCCAGGTCTACCAGGAATGCCAGGAGCTGATGGTCCTCCCGGTCATCCCGGGAAGGAAGGTCCTGGTGGAACCAAAGGAAATCAAGGTCCTAATGGTCCTCAGGGCTCTATTGGCTATCCTGGCCCTCGGGGATTGAagGGAGCTCAAGGTATCCGTGGACTGAAAGGTCATAAAGGAGAGAAGggaGAGGATGGATTCCCAGGAATTAAAGGAGACTTTGGTGTGAAGGGAGAGAGGGGAGAGGTGGGCGTGCCCGGCCCAAGAGGAGAAGATGGTCCTGAGGGGCCAAAGGGTCGCGTCGGACCCCCTGGTGAAATTGGTCCCCTCGGCCTGTTGGGAGAGAAGGGTAAACTTGGTGTTCCTGGACTTCCTGGATATCCTGGACGTCAAGGAATAAAGGGGTCCCTTGGTTTCCCAGGATTCCCTGGTACAAATGGCGAGAAGGGCACAAGGGGTTTGATTGGAAAACCTGGACCAAGAGGACAAAGAGGGCCGACAggTCCTAGAGGGCAGAGAGGACCACGTGGGGCAACTGGGAAATCAGGTGCTAAGGGTGGATCAGGAAGTGACGGGCCTCCTGGACCACCAGGAGAGAGAggGCTAACTGGACCTCAGGGTGCTAATGGATTCCCTGGGCCAAAGGGACCTCCCGGACCTCCAGGGAAAGATGGACTTCCTGGACACCCTGGACAGAGAGGCGAAGTCGGTTTCCAAGGCAAAGTTGGACCACCTGGCCCACCTGGAGTTGTTGGCCCACACGGTCCCTCTGGTGAGACTGGTCAGATGGGTGAGCGTGGCCACCCTGGACCTCCAGGACCACCTGGTGAGCAAGGCCTTTCTGGCTCCTCTGGTAAAGAAGGAACCAAAGGAGATCCCGGTCCTCCTGGTGGCCCCGGTAAAGATGGACCCCCTGGACTTAGAGGATTCCCAGGAGAGAGAGGACTACCAGGAACTCCAGGTTCTGGAGGACTGAAAGGAAATGAAGGCCCTGCTGGACCACCTGGTCCTGCGGGTTCATCTGGGGAGAGAGGTGGTGCTGGCACTGCAGGCCCTGTCGGCCCACCTGGACGACCTGGACCTCAGGGACCCCCTGGAACTTCAGGTGAAAAGGGAGTACCAGGCGAGAAAGGTCCGGTTGGTCCAGCTGGTCGTGATGGCATCCAAGGCCCAGTTGGTCTCCCAGGCCCTGCCGGACCTCCAGGTATTTCTGGAGAAGATGGAGACAAGGGTGAGGTTGGAGAGCCAGGACAAAAGGGAGCTAAAGGGTCCAAAGGAGAACATGGTCCTCCTGGTCCACCTGGGCCGATGGGTCCTGTTGGACAGCCTGGTGCAGCGGGTGCTGATGGTGAGACGGGTCCAAGAGGTCAACAGGGACAGTTTGGTGCCAAGGGAGATGAAGGCACAAGAGGTTTCCCTGGTCCCCCTGGCCCCATAGGATTGCAGGGTTTGCCAGGCCCAGGTGGAGAAAAGGGAGAGACAGGAGATGTTGGACCCTTGGGTCCTCCTGGTCCTCCAGGGCCGCGTGGTCCTGCTGGTCCTAATGGTGCTGATGGTCCCCAAGGTCCTCCAGGAGGTTTGGGTAATCCAGGTCCCATAGGAGAGAAGGGTGAGCCTGGTGAATCTGGACCACCTGGTGTTGGTGGAGAGCCAGGAAAATTGGGCCCAAGAGGAGAGCGTGGTGAGAAGGGAGAGTCCGGGCAGCCTGGCACCCCTGGTCCTCCTGGAGGAAAGGGACCCACTGGAGATGACGGACCCAAAGGAAACCCTggTCCTGTTGGATTCCCTGGTGATCCTGGACCCCCTGGTGAAGTTGGACCACGAGGTCAAGATGGTGCAAAGGGTGACAGAGGAGAGGATGGAGAACAAGGAGAAGCCGGCTCACCTGGACCTACTGGAGAGAACGGACCACCTGGACCTCCAGGAAAGAGAGGTCCTGCAGGCACAAGGGGACCGGAGGGCCGTCAAGGAGAGAAAGGAAGCAAGGGTGATTCAGGTGCTCTTGGTCCTCCCGGAAAAACTGGCCCTGTGGGGCCACAGGGACAACCCGGAAAACCAGGAACTGAGGGTCTAAGAGGGTTGCCTGGAACAGTGGGTGAGCAAGGTTCTCCAGGTGCTGCAGGCCCTAAAGGACCTCCTGGACCTCTGGGTCCTCCAGGTCTGGCTGGTCTTCGCGGTGATCCCGGTGCTAAAGGTGAGAAGGGACATCCAGGTATGCTCGGACTGATCGGGCCTGCTGGAGAACAAGGAGAGAAGGGAGACAGAGGCATGCCAGGACCACAGGGATCAACAGGACCCAAGGGAGAAACGggtATATCTGGAGGAACTGGTCCACTTGGTCCTGCAGGTCCTGCTGGTATGCCTGGCCCGAGGGGTGTCAAAGGAGCTAAAGGTGCCAGTGGTGGGGCTGGTCCTAAAGGAGAAAAGGGTGTACAAGGACCACCAGGACCACCTGGTCCCCCTGGTGATGTCATCCAGCCGCTGCCCATTCAGATCCCCAAGAAGTCCAAGCGCTCCATCGACGCCAGTAAGATTCTGTCTGAGGCTGACGCTGAGGCTGCCGACACCACTGGCTCTGAGTTCCTGACTGGTAATGAAGGAATGGAGGAGATCTTCGGCTCACTTAATTCCCTGCGCCAGGAGATCGAGAGCATGCGCTTCCCATTGGGCACAAAGGAGAGCCCCGGCCGCACCTGCCAGGATCTCCATCTCAGCCAACCAGATCTGAAAGACGGCGAGTATTGGATTGATCCAAATCAAGGCTGTGCTCGCGACTCTTTCAAGGTTTACTGTAACTTCACTGCCGGCGGAGAGACCTGCCTGTATCCCAGCAAAGCAGTGGAGAATGTAAAGATGAACTCTTGGATAAAGGAGAAGCCTGGGTCCTTGTTCAGTCAGTTTGCAAAGGGCAACAAGTTTTCATATGTAGACTCGGTTGGAGAGGCTGTGGGTGTTGTTCAGCTGGGCTTCTTGCGGCTGCTCAGTGTCCAGGCCAGACAGAACCTCACCTACCACTGCCAACGCTCGGTGGCCTGGACTGACCAAACCACCGACGGCGGATACAAGCGGGCGCTGCGTCTGCAGGGGGCCAATGATGAGGAGATCAGCTATGAGACTAGCCCATATATCAAAGCCCTCATCGACGGCTGCTCCTATCGTAAGGGTCTGGACAGGACGGTGCTGGAGGTGAACACACCTCAGGTGGAGCAGCTCCCTCTGCTGGACATCAGGATCTCAGACTTTGGGGAGGACAATCAGAAATTTGGTTTTGAAGTAGGACCTGTCTGTTTCCTgggataaacacacacacacacacagacacacacatgctgaGGGCAAGGGGAATACAATcaccaaaacaaacaacacacacactcaatcatgCACTTAAATATACGACAAATACAACCACACACAGATGTGCCAACACAAGACATTAAGTGACACAcatagactcacacacacacacacacacacacacacacattgtgaatAAAAGTTGCACACGAACTACACACCCAGGGAAAAACACTCCCAGCATTGAATGGACAACACAAGAAGagaaagaggagagagagagccGTTCTCTCAGGAGAGAAGAGATTGTGTCCAGTAACagaagtgtgttggagcagataCTGCTGACCCTCCGCTTCGCTCCTACAGCTCCCGTCCCCACTGTCTGTCTTCCGGGACGTCCCGCTACTCCTACCTCCATCATCTAAAGTCCTCCAGTCCACAGGTGCTACAATTAAACTGAGGAACGTTTCTAATCCTGAATGACACCAGCCACATTTATCAAATCAAACCAAAGCCATTTATACTAGTGTAAAGATGTTGACTTTGATAATGTTGTACATTTATTATAGAGTGACTCAAATCTGTAtgaattcttgatttttttttaaagacatgccAACTTACCAGTCCagtatttatgaattattaaGCTGGTTTTTGTTTCACACACTACCTTTTTAAACCAATTATAATGTTTGCGTTTGATCTGACccacagcattcattcattcactcatccaCGATGCTGGAACGGTGCATTAGAAATCCATTTGTACAGAAATATTTGAAtctatttattatgtaattgtgaAACAAACAGGTGCTCACAAGAAAACAACCAACACTCGCTGTACTAAACAATGTGGTATTCATCTGTAATTATTTCATGTAGTTTCCATCACgctattaaatatgtaaattaaaccCCAAGAAGCAAATCCGCCTTCTCTGTATGATATATATACGTATATTTGCCTTTGAGCGATGCTTTGGTGATGATGCTGCATTAATCCAGAGGTTCAGGAGAGTGTGTTTTAGGTGCTGAGAGTCTGGAGCGTCAGACAGCAGTGGAGAAGGGACAGCCAGAGGAAGAGTCTGATGgtggtttgttgtttttaatgtatatttccTTTTTGTTTTCGTTTTTTAAAACAAGGAATTGAGGGGAATGAAAAGCTATAAAAATGATTTGTGAATGAAAAGTTGTTTGTGTGGTTTTCTCACAAGGACGATACTGCAAGGGTTGTTTTTGAAAGACGAACATCTGTCTTTATGGTGCTAAAACGTTTTTAATGTAAGTACTTCAAAGTCTGTTTGTGTAATATATAATCTATTTAAAGAGCTGTTGGACTCCTTTGTTGTTCTTTTGGTTGTTTACTGTCGTCACATGCTAATATTTGATCTGCTAAACTGAGATCATCATCTAAACAGCACATATCATGTCTCCATGAAGCCGTCATACGTCTGTCCATCAAATTAACTCTTCAgatatcaatattttatttgtccTCCAGTTTTATAAGTGTGGGTTTGCAGCTGTTATCTGTTTTAATTCTTGTTGTTTTGGTCTAAAGTTCCCATTAAACCACACATCAACACA
>TCONS_00028740
GTGATTTGAAGCCTCTCTCTGCTCTCTCCGCTTTTCTGTTCTCTCAGACTCAATGGGGCTCTAGCAAAAGGGATTTCAAGCTGTAAAACTACATATTTATTACCCGAACCCTTCTTTCTATTTAAGTTTTGTACATAGCACAGATAACTTATTGAAGAACAAGTCAAACCAAACCCGTCAAAAAACTTGGGAACTATGGATATTCGGAAGAAGCGGAGGCCGTGGTGCATGGAGACCTCGTTTGTGCTCCTCCTGTGCCTTTCTATGGCACAAGCAGATCCAGTAGATGTTTTGCGGGTGCTGCAGTTGCCTTCCCTTCCTGAAGGTGTGCAGAAGGTTCCGGGTTTCTGTACCTCCCGATTGTCTGGGACTCCTGATCATGCCTACCGCATCACTAAAAAAGCCCAGATCTCTGCCCCCACCAAACAGCTATTCTCAGGACGTTTCCCGGAGAACTTCTCCATCATGACTCTGGTAAAGGCCAAGGCTGGTCTTCAAGCCTTCCTGTTGTCCATCTATAATGAGCAGGGTGTGCAGCAGCTTGGGCTGGAGCTGGGACGCTCACCCATCTTCCTGTATGAGGACCAGCATCGCAAACCTGCCCCAGAGGACTACCCACTGTTCAAAGGCGTCAACCTGGCTGACGGCAAGTGGCACCGCATTGCCATTTCTGTGCAGAAGAAGAACATCACTCTGATCCTGGACTGCAAGAATCGCATCACCAAAACTCTGCCAAGGAGCAACAACCCAGTGTTGGACACCAAGGGCATCACTGTTTTTGGAGCCCGTCTCCTGGATGAGGAGGTTTTCCAGGGTGAGATCCAGCAGCTGCTGATCGCATCCAACCCTCAGGCCGCATATGACTTCTGTGAGCATTACAGCCCTGACTGCGACTCTCCTCTGCCCAAAGTCCAGTCCCAGGACCCAAACACCTATCACTTTGATGAAGAGCAGGATGATTATGAATACCCCTATTATTATGAAGGAACTACCAGTGTCCCTCCCTCCCCATCCAAACCTCCCTCCGTCCCAGCCGAGACACTCACTGAACAGGACGTAGATCCTGCTTACTCAGAGGCTGACCACACCCCCACAGAGACCGATTATTATTACACAGTAGAAGAAGAGGCGGCTCCACAGCCAGAGAGTGATCTGACTGGATATGACGAAAGCATTAACCAGGTCGACGAGACTGTCCCCGTTGAGGAAATGGATGCTACCAAGACAGGTGGTGAGGTGGCGTCTCAAACGCCAGAAGAGCCCTTCACTGAGGAGTACATTACAAGCGACTTTGGGATGAAGGAGTATGACTATTCCTACAAGGACTACAATGAGCCCATCATTGAGAGCAAGACGGAGGACACTCTAGGCCCTGCCCTGTCCGCTGTGACAGAGGAGGGGGGTGCCTCAGTGCGAGCCATTAAGGGAGAGAAGGGAGAGCCTGCTGTCCTTGAACCTGGCATGCTGATTGAAGGACCACCAGGACCAGAAGGACCAGCAGGTCTCCCTGGCCCCTCTGGCCCCCAAGGACAACCTGGTTCTGTTGGTGATCCTGGTGAGAGGGGTCCTACTGGTAAGGCTGGTCTACCTGGAGCAGATGGTGTTCCAGGACCTCCAGGAACCTCTGTCATGCTTCCTTTCCGCTTTGGACAGAGCGCTGGAGAGAAAGGACCTGTTGCCTCTGCACAGGAAGCCCAAGCTCAAGCCATTCTGTCTCAAGCTCGGCTTGCCCTGAAAGGACCATCCGGGCCAATGGGTTTCACTGGCCGTCCTGGacctttgGGAACACCTGGAAGTCCTGGCTTTAAGGGAGAAAGGGGGGACCCTGGTGCTCAGGGTCCTAGAGGTCCTCAGGGTGTGTCTGGTCCTCCTGGCAAAGCTGGTCGGAGGGGTCGCGCTGGTGCTGATGGAGCCAGAGGGATGCCAGGAGAGTCTGGAATTAAGgGTGACCGTGGTTTTGATGGCCTTCCTGGTTTGCCTGGTGACAAGGGTTATCGGGGTCAACCTGGAGGAATGGGACCCCCAGGACCACATGGAGAGGACGGAGAGAGGGGAGATGATGGAGATGTTGGACCCAGAGGTCTTCCTGGCGAACCTGGACCCCGTGGTTTGTTGGGGCCTAAAGGGCCTTCTGGACTTCCTGGACCTCCTGGTGTTCGTGGAAATGATGGTCCACATGGTCCAAAAGGAAACTTAGGACCACAAGGAGAGCCCGGTCCTCCAGGCCAGCAGGGGGCTCCAGGAACACAGGGAATGCCAGGTCCACAGGGTGCCACTGGACCACCAGGAGAGAAAGGACCCACAGGAAAGCCAGGTCTACCAGGAATGCCAGGAGCTGATGGTCCTCCCGGTCATCCCGGGAAGGAAGGTCCTGGTGGAACCAAAGGAAATCAAGGTCCTAATGGTCCTCAGGGCTCTATTGGCTATCCTGGCCCTCGGGGATTGAagGGAGCTCAAGGTATCCGTGGACTGAAAGGTCATAAAGGAGAGAAGggaGAGGATGGATTCCCAGGAATTAAAGGAGACTTTGGTGTGAAGGGAGAGAGGGGAGAGGTGGGCGTGCCCGGCCCAAGAGGAGAAGATGGTCCTGAGGGGCCAAAGGGTCGCGTCGGACCCCCTGGTGAAATTGGTCCCCTCGGCCTGTTGGGAGAGAAGGGTAAACTTGGTGTTCCTGGACTTCCTGGATATCCTGGACGTCAAGGAATAAAGGGGTCCCTTGGTTTCCCAGGATTCCCTGGTACAAATGGCGAGAAGGGCACAAGGGGTTTGATTGGAAAACCTGGACCAAGAGGACAAAGAGGGCCGACAggTCCTAGAGGGCAGAGAGGACCACGTGGGGCAACTGGGAAATCAGGTGCTAAGGGTGGATCAGGAAGTGACGGGCCTCCTGGACCACCAGGAGAGAGAggGCTAACTGGACCTCAGGGTGCTAATGGATTCCCTGGGCCAAAGGGACCTCCCGGACCTCCAGGGAAAGATGGACTTCCTGGACACCCTGGACAGAGAGGCGAAGTCGGTTTCCAAGGCAAAGTTGGACCACCTGGCCCACCTGGAGTTGTTGGCCCACACGGTCCCTCTGGTGAGACTGGTCAGATGGGTGAGCGTGGCCACCCTGGACCTCCAGGACCACCTGGTGAGCAAGGCCTTTCTGGCTCCTCTGGTAAAGAAGGAACCAAAGGAGATCCCGGTCCTCCTGGTGGCCCCGGTAAAGATGGACCCCCTGGACTTAGAGGATTCCCAGGAGAGAGAGGACTACCAGGAACTCCAGGTTCTGGAGGACTGAAAGGAAATGAAGGCCCTGCTGGACCACCTGGTCCTGCGGGTTCATCTGGGGAGAGAGGTGGTGCTGGCACTGCAGGCCCTGTCGGCCCACCTGGACGACCTGGACCTCAGGGACCCCCTGGAACTTCAGGTGAAAAGGGAGTACCAGGCGAGAAAGGTCCGGTTGGTCCAGCTGGTCGTGATGGCATCCAAGGCCCAGTTGGTCTCCCAGGCCCTGCCGGACCTCCAGGTATTTCTGGAGAAGATGGAGACAAGGGTGAGGTTGGAGAGCCAGGACAAAAGGGAGCTAAAGGGTCCAAAGGAGAACATGGTCCTCCTGGTCCACCTGGGCCGATGGGTCCTGTTGGACAGCCTGGTGCAGCGGGTGCTGATGGTGAGACGGGTCCAAGAGGTCAACAGGGACAGTTTGGTGCCAAGGGAGATGAAGGCACAAGAGGTTTCCCTGGTCCCCCTGGCCCCATAGGATTGCAGGGTTTGCCAGGCCCAGGTGGAGAAAAGGGAGAGACAGGAGATGTTGGACCCTTGGGTCCTCCTGGTCCTCCAGGGCCGCGTGGTCCTGCTGGTCCTAATGGTGCTGATGGTCCCCAAGGTCCTCCAGGAGGTTTGGGTAATCCAGGTCCCATAGGAGAGAAGGGTGAGCCTGGTGAATCTGGACCACCTGGTGTTGGTGGAGAGCCAGGAAAATTGGGCCCAAGAGGAGAGCGTGGTGAGAAGGGAGAGTCCGGGCAGCCTGGCACCCCTGGTCCTCCTGGAGGAAAGGGACCCACTGGAGATGACGGACCCAAAGGAAACCCTggTCCTGTTGGATTCCCTGGTGATCCTGGACCCCCTGGTGAAGTTGGACCACGAGGTCAAGATGGTGCAAAGGGTGACAGAGGAGAGGATGGAGAACAAGGAGAAGCCGGCTCACCTGGACCTACTGGAGAGAACGGACCACCTGGACCTCCAGGAAAGAGAGGTCCTGCAGGCACAAGGGGACCGGAGGGCCGTCAAGGAGAGAAAGGAAGCAAGGGTGATTCAGGTGCTCTTGGTCCTCCCGGAAAAACTGGCCCTGTGGGGCCACAGGGACAACCCGGAAAACCAGGAACTGAGGGTCTAAGAGGGTTGCCTGGAACAGTGGGTGAGCAAGGTTCTCCAGGTGCTGCAGGCCCTAAAGGACCTCCTGGACCTCTGGGTCCTCCAGGTCTGGCTGGTCTTCGCGGTGATCCCGGTGCTAAAGGTGAGAAGGGACATCCAGGTATGCTCGGACTGATCGGGCCTGCTGGAGAACAAGGAGAGAAGGGAGACAGAGGCATGCCAGGACCACAGGGATCAACAGGACCCAAGGGAGAAACGggtATATCTGGAGGAACTGGTCCACTTGGTCCTGCAGGTCCTGCTGGTATGCCTGGCCCGAGGGGTGTCAAAGGAGCTAAAGGTGCCAGTGGTGGGGCTGGTCCTAAAGGAGAAAAGGGTGTACAAGGACCACCAGGACCACCTGGTCCCCCTGGTGATGTCATCCAGCCGCTGCCCATTCAGATCCCCAAGAAGTCCAAGCGCTCCATCGACGCCAGTAAGATTCTGTCTGAGGCTGACGCTGAGGCTGCCGACACCACTGGCTCTGAGTTCCTGACTGGTAATGAAGGAATGGAGGAGATCTTCGGCTCACTTAATTCCCTGCGCCAGGAGATCGAGAGCATGCGCTTCCCATTGGGCACAAAGGAGAGCCCCGGCCGCACCTGCCAGGATCTCCATCTCAGCCAACCAGATCTGAAAGACGGCGAGTATTGGATTGATCCAAATCAAGGCTGTGCTCGCGACTCTTTCAAGGTTTACTGTAACTTCACTGCCGGCGGAGAGACCTGCCTGTATCCCAGCAAAGCAGTGGAGAATGTAAAGATGAACTCTTGGATAAAGGAGAAGCCTGGGTCCTTGTTCAGTCAGTTTGCAAAGGGCAACAAGTTTTCATATGTAGACTCGGTTGGAGAGGCTGTGGGTGTTGTTCAGCTGGGCTTCTTGCGGCTGCTCAGTGTCCAGGCCAGACAGAACCTCACCTACCACTGCCAACGCTCGGTGGCCTGGACTGACCAAACCACCGACGGCGGATACAAGCGGGCGCTGCGTCTGCAGGGGGCCAATGATGAGGAGATCAGCTATGAGACTAGCCCATATATCAAAGCCCTCATCGACGGCTGCTCCTATCGTAAGGGTCTGGACAGGACGGTGCTGGAGGTGAACACACCTCAGGTGGAGCAGCTCCCTCTGCTGGACATCAGGATCTCAGACTTTGGGGAGGACAATCAGAAATTTGGTTTTGAAGTAGGACCTGTCTGTTTCCTgggataaacacacacacacacacagacacacacatgctgaGGGCAAGGGGAATACAATcaccaaaacaaacaacacacacactcaatcatgCACTTAAATATACGACAAATACAACCACACACAGATGTGCCAACACAAGACATTAAGTGACACAcatagactcacacacacacacacacacacacacacacattgtgaatAAAAGTTGCACACGAACTACACACCCAGGGAAAAACACTCCCAGCATTGAATGGACAACACAAGAAGagaaagaggagagagagagccGTTCTCTCAGGAGAGAAGAGATTGTGTCCAGTAACagaagtgtgttggagcagataCTGCTGACCCTCCGCTTCGCTCCTACAGCTCCCGTCCCCACTGTCTGTCTTCCGGGACGTCCCGCTACTCCTACCTCCATCATCTAAAGTCCTCCAGTCCACAGGTGCTACAATTAAACTGAGGAACGTTTCTAATCCTGAATGACACCAGCCACATTTATCAAATCAAACCAAAGCCATTTATACTAGTGTAAAGATGTTGACTTTGATAATGTTGTACATTTATTATAGAGTGACTCAAATCTGTAtgaattcttgatttttttttaaagacatgccAACTTACCAGTCCagtatttatgaattattaaGCTGGTTTTTGTTTCACACACTACCTTTTTAAACCAATTATAATGTTTGCGTTTGATCTGACccacagcattcattcattcactcatccaCGATGCTGGAACGGTGCATTAGAAATCCATTTGTACAGAAATATTTGAAtctatttattatgtaattgtgaAACAAACAGGTGCTCACAAGAAAACAACCAACACTCGCTGTACTAAACAATGTGGTATTCATCTGTAATTATTTCATGTAGTTTCCATCACgctattaaatatgtaaattaaaccCCAAGAAGCAAA
>TCONS_00028741
ACTCAATGGGGCTCTAGCAAAAGGGATTTCAAGCTGTAAAACTACATATTTATTACCCGAACCCTTCTTTCTATTTAAGTTTTGTACATAGCACAGATAACTTATTGAAGAACAAGGTGGGTGTGCGTTTACGACGTCTCTAAAGGCTCTCTTAAAGCCGAGTCCACTGAGTTTTTGTGAGAGAAAAGAACCAAAAGGCTAATTTCTGAAACTGTCCCGCCTTGTAGTCAAACCAAACCCGTCAAAAAACTTGGGAACTATGGATATTCGGAAGAAGCGGAGGCCGTGGTGCATGGAGACCTCGTTTGTGCTCCTCCTGTGCCTTTCTATGGCACAAGCAGATCCAGTAGATGTTTTGCGGGTGCTGCAGTTGCCTTCCCTTCCTGAAGGTGTGCAGAAGGTTCCGGGTTTCTGTACCTCCCGATTGTCTGGGACTCCTGATCATGCCTACCGCATCACTAAAAAAGCCCAGATCTCTGCCCCCACCAAACAGCTATTCTCAGGACGTTTCCCGGAGAACTTCTCCATCATGACTCTGGTAAAGGCCAAGGCTGGTCTTCAAGCCTTCCTGTTGTCCATCTATAATGAGCAGGGTGTGCAGCAGCTTGGGCTGGAGCTGGGACGCTCACCCATCTTCCTGTATGAGGACCAGCATCGCAAACCTGCCCCAGAGGACTACCCACTGTTCAAAGGCGTCAACCTGGCTGACGGCAAGTGGCACCGCATTGCCATTTCTGTGCAGAAGAAGAACATCACTCTGATCCTGGACTGCAAGAATCGCATCACCAAAACTCTGCCAAGGAGCAACAACCCAGTGTTGGACACCAAGGGCATCACTGTTTTTGGAGCCCGTCTCCTGGATGAGGAGGTTTTCCAGGGTGAGATCCAGCAGCTGCTGATCGCATCCAACCCTCAGGCCGCATATGACTTCTGTGAGCATTACAGCCCTGACTGCGACTCTCCTCTGCCCAAAGTCCAGTCCCAGGACCCAAACACCTATGTCGACGAGACTGTCCCCGTTGAGGAAATGGATGCTACCAAGACAGGTGGTGAGGTGGCGTCTCAAACGCCAGAAGAGCCCTTCACTGAGGAGTACATTACAAGCGACTTTGGGATGAAGGAGTATGACTATTCCTACAAGGACTACAATGAGCCCATCATTGAGAGCAAGACGGAGGACACTCTAGGCCCTGCCCTGTCCGCTGTGACAGAGGAGGGGGGTGCCTCAGTGCGAGCCATTAAGGGAGAGAAGGGAGAGCCTGCTGTCCTTGAACCTGGCATGCTGATTGAAGGACCACCAGGACCAGAAGGACCAGCAGGTCTCCCTGGCCCCTCTGGCCCCCAAGGACAACCTGGTTCTGTTGGTGATCCTGGTGAGAGGGGTCCTACTGGTAAGGCTGGTCTACCTGGAGCAGATGGTGTTCCAGGACCTCCAGGAACCTCTGTCATGCTTCCTTTCCGCTTTGGACAGAGCGCTGGAGAGAAAGGACCTGTTGCCTCTGCACAGGAAGCCCAAGCTCAAGCCATTCTGTCTCAAGCTCGGCTTGCCCTGAAAGGACCATCCGGGCCAATGGGTTTCACTGGCCGTCCTGGacctttgGGAACACCTGGAAGTCCTGGCTTTAAGGGAGAAAGGGGGGACCCTGGTGCTCAGGGTCCTAGAGGTCCTCAGGGTGTGTCTGGTCCTCCTGGCAAAGCTGGTCGGAGGGGTCGCGCTGGTGCTGATGGAGCCAGAGGGATGCCAGGAGAGTCTGGAATTAAGgGTGACCGTGGTTTTGATGGCCTTCCTGGTTTGCCTGGTGACAAGGGTTATCGGGGTCAACCTGGAGGAATGGGACCCCCAGGACCACATGGAGAGGACGGAGAGAGGGGAGATGATGGAGATGTTGGACCCAGAGGTCTTCCTGGCGAACCTGGACCCCGTGGTTTGTTGGGGCCTAAAGGGCCTTCTGGACTTCCTGGACCTCCTGGTGTTCGTGGAAATGATGGTCCACATGGTCCAAAAGGAAACTTAGGACCACAAGGAGAGCCCGGTCCTCCAGGCCAGCAGGGGGCTCCAGGAACACAGGGAATGCCAGGTCCACAGGGTGCCACTGGACCACCAGGAGAGAAAGGACCCACAGGAAAGCCAGGTCTACCAGGAATGCCAGGAGCTGATGGTCCTCCCGGTCATCCCGGGAAGGAAGGTCCTGGTGGAACCAAAGGAAATCAAGGTCCTAATGGTCCTCAGGGCTCTATTGGCTATCCTGGCCCTCGGGGATTGAagGGAGCTCAAGGTATCCGTGGACTGAAAGGTCATAAAGGAGAGAAGggaGAGGATGGATTCCCAGGAATTAAAGGAGACTTTGGTGTGAAGGGAGAGAGGGGAGAGGTGGGCGTGCCCGGCCCAAGAGGAGAAGATGGTCCTGAGGGGCCAAAGGGTCGCGTCGGACCCCCTGGTGAAATTGGTCCCCTCGGCCTGTTGGGAGAGAAGGGTAAACTTGGTGTTCCTGGACTTCCTGGATATCCTGGACGTCAAGGAATAAAGGGGTCCCTTGGTTTCCCAGGATTCCCTGGTACAAATGGCGAGAAGGGCACAAGGGGTTTGATTGGAAAACCTGGACCAAGAGGACAAAGAGGGCCGACAggTCCTAGAGGGCAGAGAGGACCACGTGGGGCAACTGGGAAATCAGGTGCTAAGGGTGGATCAGGAAGTGACGGGCCTCCTGGACCACCAGGAGAGAGAggGCTAACTGGACCTCAGGGTGCTAATGGATTCCCTGGGCCAAAGGGACCTCCCGGACCTCCAGGGAAAGATGGACTTCCTGGACACCCTGGACAGAGAGGCGAAGTCGGTTTCCAAGGCAAAGTTGGACCACCTGGCCCACCTGGAGTTGTTGGCCCACACGGTCCCTCTGGTGAGACTGGTCAGATGGGTGAGCGTGGCCACCCTGGACCTCCAGGACCACCTGGTGAGCAAGGCCTTTCTGGCTCCTCTGGTAAAGAAGGAACCAAAGGAGATCCCGGTCCTCCTGGTGGCCCCGGTAAAGATGGACCCCCTGGACTTAGAGGATTCCCAGGAGAGAGAGGACTACCAGGAACTCCAGGTTCTGGAGGACTGAAAGGAAATGAAGGCCCTGCTGGACCACCTGGTCCTGCGGGTTCATCTGGGGAGAGAGGTGGTGCTGGCACTGCAGGCCCTGTCGGCCCACCTGGACGACCTGGACCTCAGGGACCCCCTGGAACTTCAGGTGAAAAGGGAGTACCAGGCGAGAAAGGTCCGGTTGGTCCAGCTGGTCGTGATGGCATCCAAGGCCCAGTTGGTCTCCCAGGCCCTGCCGGACCTCCAGGTATTTCTGGAGAAGATGGAGACAAGGGTGAGGTTGGAGAGCCAGGACAAAAGGGAGCTAAAGGGTCCAAAGGAGAACATGGTCCTCCTGGTCCACCTGGGCCGATGGGTCCTGTTGGACAGCCTGGTGCAGCGGGTGCTGATGGTGAGACGGGTCCAAGAGGTCAACAGGGACAGTTTGGTGCCAAGGGAGATGAAGGCACAAGAGGTTTCCCTGGTCCCCCTGGCCCCATAGGATTGCAGGGTTTGCCAGGCCCAGGTGGAGAAAAGGGAGAGACAGGAGATGTTGGACCCTTGGGTCCTCCTGGTCCTCCAGGGCCGCGTGGTCCTGCTGGTCCTAATGGTGCTGATGGTCCCCAAGGTCCTCCAGGAGGTTTGGGTAATCCAGGTCCCATAGGAGAGAAGGGTGAGCCTGGTGAATCTGGACCACCTGGTGTTGGTGGAGAGCCAGGAAAATTGGGCCCAAGAGGAGAGCGTGGTGAGAAGGGAGAGTCCGGGCAGCCTGGCACCCCTGGTCCTCCTGGAGGAAAGGGACCCACTGGAGATGACGGACCCAAAGGAAACCCTggTCCTGTTGGATTCCCTGGTGATCCTGGACCCCCTGGTGAAGTTGGACCACGAGGTCAAGATGGTGCAAAGGGTGACAGAGGAGAGGATGGAGAACAAGGAGAAGCCGGCTCACCTGGACCTACTGGAGAGAACGGACCACCTGGACCTCCAGGAAAGAGAGGTCCTGCAGGCACAAGGGGACCGGAGGGCCGTCAAGGAGAGAAAGGAAGCAAGGGTGATTCAGGTGCTCTTGGTCCTCCCGGAAAAACTGGCCCTGTGGGGCCACAGGGACAACCCGGAAAACCAGGAACTGAGGGTCTAAGAGGGTTGCCTGGAACAGTGGGTGAGCAAGGTTCTCCAGGTGCTGCAGGCCCTAAAGGACCTCCTGGACCTCTGGGTCCTCCAGGTCTGGCTGGTCTTCGCGGTGATCCCGGTGCTAAAGGTGAGAAGGGACATCCAGGTATGCTCGGACTGATCGGGCCTGCTGGAGAACAAGGAGAGAAGGGAGACAGAGGCATGCCAGGACCACAGGGATCAACAGGACCCAAGGGAGAAACGggtATATCTGGAGGAACTGGTCCACTTGGTCCTGCAGGTCCTGCTGGTATGCCTGGCCCGAGGGGTGTCAAAGGAGCTAAAGGTGCCAGTGGTGGGGCTGGTCCTAAAGGAGAAAAGGGTGTACAAGGACCACCAGGACCACCTGGTCCCCCTGGTGATGTCATCCAGCCGCTGCCCATTCAGATCCCCAAGAAGTCCAAGCGCTCCATCGACGCCAGTAAGATTCTGTCTGAGGCTGACGCTGAGGCTGCCGACACCACTGGCTCTGAGTTCCTGACTGGTAATGAAGGAATGGAGGAGATCTTCGGCTCACTTAATTCCCTGCGCCAGGAGATCGAGAGCATGCGCTTCCCATTGGGCACAAAGGAGAGCCCCGGCCGCACCTGCCAGGATCTCCATCTCAGCCAACCAGATCTGAAAGACGGCGAGTATTGGATTGATCCAAATCAAGGCTGTGCTCGCGACTCTTTCAAGGTTTACTGTAACTTCACTGCCGGCGGAGAGACCTGCCTGTATCCCAGCAAAGCAGTGGAGAATGTAAAGATGAACTCTTGGATAAAGGAGAAGCCTGGGTCCTTGTTCAGTCAGTTTGCAAAGGGCAACAAGTTTTCATATGTAGACTCGGTTGGAGAGGCTGTGGGTGTTGTTCAGCTGGGCTTCTTGCGGCTGCTCAGTGTCCAGGCCAGACAGAACCTCACCTACCACTGCCAACGCTCGGTGGCCTGGACTGACCAAACCACCGACGGCGGATACAAGCGGGCGCTGCGTCTGCAGGGGGCCAATGATGAGGAGATCAGCTATGAGACTAGCCCATATATCAAAGCCCTCATCGACGGCTGCTCCTATCGTAAGGGTCTGGACAGGACGGTGCTGGAGGTGAACACACCTCAGGTGGAGCAGCTCCCTCTGCTGGACATCAGGATCTCAGACTTTGGGGAGGACAATCAGAAATTTGGTTTTGAAGTAGGACCTGTCTGTTTCCTgggataaacacacacacacacacagacacacacatgctgaGGGCAAGGGGAATACAAT
>TCONS_00028742
cacacacacacgcacacacacacacacacacacacgctccccTGCATTTCGTGGGAGAAAGTAagaagagggagagagaaagagagagattgagagaGAGTGATTTGAAGCCTCTCTCTGCTCTCTCCGCTTTTCTGTTCTCTCAGACTCAATGGGGCTCTAGCAAAAGGGATTTCAAGCTGTAAAACTACATATTTATTACCCGAACCCTTCTTTCTATTTAAGTTTTGTACATAGCACAGATAACTTATTGAAGAACAAGTCAAACCAAACCCGTCAAAAAACTTGGGAACTATGGATATTCGGAAGAAGCGGAGGCCGTGGTGCATGGAGACCTCGTTTGTGCTCCTCCTGTGCCTTTCTATGGCACAAGCAGATCCAGTAGATGTTTTGCGGGTGCTGCAGTTGCCTTCCCTTCCTGAAGGTGTGCAGAAGGTTCCGGGTTTCTGTACCTCCCGATTGTCTGGGACTCCTGATCATGCCTACCGCATCACTAAAAAAGCCCAGATCTCTGCCCCCACCAAACAGCTATTCTCAGGACGTTTCCCGGAGAACTTCTCCATCATGACTCTGGTAAAGGCCAAGGCTGGTCTTCAAGCCTTCCTGTTGTCCATCTATAATGAGCAGGGTGTGCAGCAGCTTGGGCTGGAGCTGGGACGCTCACCCATCTTCCTGTATGAGGACCAGCATCGCAAACCTGCCCCAGAGGACTACCCACTGTTCAAAGGCGTCAACCTGGCTGACGGCAAGTGGCACCGCATTGCCATTTCTGTGCAGAAGAAGAACATCACTCTGATCCTGGACTGCAAGAATCGCATCACCAAAACTCTGCCAAGGAGCAACAACCCAGTGTTGGACACCAAGGGCATCACTGTTTTTGGAGCCCGTCTCCTGGATGAGGAGGTTTTCCAGGGTGAGATCCAGCAGCTGCTGATCGCATCCAACCCTCAGGCCGCATATGACTTCTGTGAGCATTACAGCCCTGACTGCGACTCTCCTCTGCCCAAAGTCCAGTCCCAGGACCCAAACACCTATgCGGGCAAGGCAAACAATGGCAAAGTCACTAAGCAAAAAACTGCTCCAGCTGCAAAGCCTGCTCCAGctaaaccagctaaatccaaGCCAACACCAGCACCCAAAACAGCAAAGAGCAAACCTACAGCAGCACAATTATTGATTTCAAAGATAAAACCTACTCCTGCTTCTAAACTAGCAGCTAAACCAAAAGCAACTCCAGCACCAAAGAATGACAAAAAGAAGACCAACGACAATGGAAAGGTCAATAATGGTCAAACTAAAGTAAATGGAAATGGTAATGGCAAGAGCAATGGAAATGGTAAAGACACTAATGGGAAGGCTAAGGCTGGCAGCAATGGTAAACCCAATAACAACGGCAACggcaatggaaaaaaaacaaacggaGATGCTAAAATTAATGGCAATGGCCCGAAAACAGTAAAGACTGTGACCAAAGTAGCATCAGCCAAGAAGTCAGAAACACCCGCTACGAAAACTGTAACAGGAAAACCTAAAGCGCAGGTCAAAGCACAACCAACCAAAAGCAA

Function

symbol description
col11a2 Predicted to be an extracellular matrix structural constituent. Acts upstream of or within cartilage morphogenesis. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including immature eye; notochord; pectoral fin bud; skeletal element; and trabecular layer. Human ortholog(s) of this gene implicated in cleft palate; nonsyndromic deafness (multiple); and osteochondrodysplasia (multiple). Orthologous to human COL11A2 (collagen type XI alpha 2 chain).

GO:

id name namespace
GO:0051216 cartilage development biological_process
GO:0030198 extracellular matrix organization biological_process
GO:0030199 collagen fibril organization biological_process
GO:0007605 sensory perception of sound biological_process
GO:0060536 cartilage morphogenesis biological_process
GO:0031012 extracellular matrix cellular_component
GO:0005581 collagen trimer cellular_component
GO:0005615 extracellular space cellular_component
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000208-23 Predicted to be an extracellular matrix structural constituent. Acts upstream of or within cartilage morphogenesis. Predicted to be located in extracellular region. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including immature eye; notochord; pectoral fin bud; skeletal element; and trabecular layer. Human ortholog(s) of this gene implicated in cleft palate; nonsyndromic deafness (multiple); and osteochondrodysplasia (multiple). Orthologous to human COL11A2 (collagen type XI alpha 2 chain).

Ensembl:

ensembl_id ENSDARG00000012422

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028739 False 6965 mRNA 0.52 65 7179740 7225190
TCONS_00028740 False 6544 mRNA 0.54 66 7180402 7225107
TCONS_00028741 False 5476 mRNA 0.56 63 7181288 7225060
TCONS_00028742 True 1565 mRNA 0.48 7 7205896 7225206

Neighbor

gene id symbol gene type direction distance location
XLOC_014522 psmb8a coding downstream 35155 7105838 ~ 7144585 (-)
XLOC_014521 tapbp.2 coding downstream 109049 7065988 ~ 7070691 (-)
XLOC_014520 tapbp.1 coding downstream 136385 7038694 ~ 7043355 (-)
XLOC_014519 daxx coding downstream 146070 7014455 ~ 7033670 (-)
XLOC_014518 znf384l coding downstream 190874 6960388 ~ 6988866 (-)
XLOC_014524 FP101875.2 coding upstream 11982 7237188 ~ 7240627 (-)
XLOC_014525 rxrba coding upstream 23835 7249041 ~ 7274844 (-)
XLOC_014526 sdha coding upstream 50854 7276060 ~ 7291733 (-)
XLOC_014527 oxr1b coding upstream 83844 7309050 ~ 7406933 (-)
XLOC_014528 rab25a coding upstream 188736 7413942 ~ 7420867 (-)
XLOC_014711 CR382300.3 misc upstream 12503484 19728690 ~ 19728755 (-)
XLOC_014517 NA non-coding downstream 264167 6900956 ~ 6915573 (-)
XLOC_014516 NA non-coding downstream 278404 6892715 ~ 6901336 (-)
XLOC_014513 NA non-coding downstream 349923 6801438 ~ 6829817 (-)
XLOC_014511 NA non-coding downstream 583123 6592036 ~ 6596617 (-)
XLOC_014505 NA non-coding downstream 1196418 5968523 ~ 5983322 (-)
XLOC_014531 BX927401.2 non-coding upstream 242995 7468201 ~ 7468316 (-)
XLOC_014533 BX927401.1 non-coding upstream 275864 7501070 ~ 7501739 (-)
XLOC_014534 NA non-coding upstream 287912 7513118 ~ 7513678 (-)
XLOC_014537 CT573133.1 non-coding upstream 334714 7559920 ~ 7576117 (-)
XLOC_014538 NA non-coding upstream 339767 7564973 ~ 7567310 (-)

Expression


Co-expression Network