XLOC_014533 (BX927401.1)


Basic Information

Item Value
gene id XLOC_014533
gene name BX927401.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 7501070 ~ 7501739 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028764
ataggctatattttattacgtgctgctcttatgtgctgaaacactgaacactttcctttacttaagatataataagcaacatctttaaataaagggaatcacctattaagtgtcataaagcctataggggggaaaaatcatgtttcagttctctccggagcatttgggatgaatgttggacagattctgtctagaggatgttataaaaaacattttatatcgagttattaacggagaattttatatatgtggttttcgtgatgatgtgatggtgtgctttatctgcatgattctcgctgaagtgggcggtttgagtgacgttcgattcgggggatgttctgggggcggggtttgcgtgacgcgctgcgagctactagccccacagtggaaacgcgacatgatttcggcctcactgctcaacctcccgggcgattggcccggcctggcccgatataagccctggctcgcactg

Function

GO:

id name namespace
GO:0001706 endoderm formation biological_process
GO:0007492 endoderm development biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095692

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028764 True 472 lncRNA 0.45 2 7501070 7501739

Neighbor

gene id symbol gene type direction distance location
XLOC_014532 rfx5 coding downstream 6064 7482784 ~ 7495006 (-)
XLOC_014531 BX927401.2 coding downstream 32754 7468201 ~ 7468316 (-)
XLOC_014530 mllt11 coding downstream 50274 7445644 ~ 7450796 (-)
XLOC_014529 gabpb2a coding downstream 59122 7432710 ~ 7441948 (-)
XLOC_014528 rab25a coding downstream 80203 7413942 ~ 7420867 (-)
XLOC_014534 NA coding upstream 11379 7513118 ~ 7513678 (-)
XLOC_014535 mrpl9 coding upstream 16565 7518304 ~ 7525588 (-)
XLOC_014536 lix1l coding upstream 27873 7529612 ~ 7540821 (-)
XLOC_014537 CT573133.1 coding upstream 58181 7559920 ~ 7576117 (-)
XLOC_014538 NA coding upstream 63234 7564973 ~ 7567310 (-)
XLOC_014711 CR382300.3 misc upstream 12226951 19728690 ~ 19728755 (-)
XLOC_014517 NA non-coding downstream 585497 6900956 ~ 6915573 (-)
XLOC_014516 NA non-coding downstream 599734 6892715 ~ 6901336 (-)
XLOC_014513 NA non-coding downstream 671253 6801438 ~ 6829817 (-)
XLOC_014511 NA non-coding downstream 904453 6592036 ~ 6596617 (-)
XLOC_014541 NA non-coding upstream 299691 7801430 ~ 7812565 (-)
XLOC_014543 CR628394.1 non-coding upstream 323656 7825395 ~ 7825533 (-)

Expression


Co-expression Network