XLOC_014560 (CU464180.1)


Basic Information

Item Value
gene id XLOC_014560
gene name CU464180.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 8983355 ~ 8985638 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028796
CTGAAATGGGTTATGATCATCAGACGAATCGGGAAAAGTTGTGTATTTTGACATCTTGGTGCTGGTTTAGATCTCGCCAAGATGTAAAAACAGGTTTAACTCAAAGGCGATGACCAGATACAAAGCGAAACAGTGTTGTTTAGCGGATAATTACCGGTAAACCTCAATCCAGTTCGCCAATCAAGCAAAGCGTGGCCCCATGACATCATCGCCTGTGGAATGAGCTGACATGAAGCCCACACTGGTGAGTTGCCAAGGGAACTAGCAGGGATGGAGGGAGCTTCAGTGGACCGCGTGTGGGTTTGTGGGTTTTGCCCCTGTTTCGCAACAGTATGGTGTCAATTAAAGAGGGCCAGAAATCAGGATCTGGGCCTCATTTGGTGCATACCACCACCACAACGGCCTTAAGCCACATGAGGCAAAAACTAAATACATAATGACGACTTGATGACCCGGTTCTAGAGTTTTTGCATTATTAATCTTGTTAACGAGGTGAGCGGTGAACACACCAGGCGTCACAGCGGATATGAATAATATGTGCAAGTCTGAAAGCATTTTGGCACAATCGCGGAATTGTAAATTGAGTCAAGAAGCCCAAACAGACACATGGAATGCGTAAAAGTTAATGCTGAGCAACATGTCTCACACAAATGTATTCATCCACACAGGCTTCttcatcttgcttatatacactatgaacagcagctacgctaattattctctttattctctatttcaccTGAGGGTACTCATCCCGaagtcctca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104154

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028796 True 766 lncRNA 0.45 2 8983355 8985638

Neighbor

gene id symbol gene type direction distance location
XLOC_014559 mrps21 coding downstream 20449 8958134 ~ 8962906 (-)
XLOC_014558 ciarta coding downstream 43287 8928434 ~ 8940068 (-)
XLOC_014557 rprd2a coding downstream 56780 8893952 ~ 8926575 (-)
XLOC_014555 celf3a coding downstream 102667 8816657 ~ 8880688 (-)
XLOC_014556 BX248499.1 coding downstream 130700 8852540 ~ 8852655 (-)
XLOC_014561 CR626935.1 coding upstream 44381 9030019 ~ 9036367 (-)
XLOC_014562 NA coding upstream 190789 9176427 ~ 9186434 (-)
XLOC_014563 CR391915.1 coding upstream 246901 9232539 ~ 9234033 (-)
XLOC_014564 NA coding upstream 395820 9381458 ~ 9382021 (-)
XLOC_014565 NA coding upstream 405597 9391235 ~ 9398466 (-)
XLOC_014711 CR382300.3 misc upstream 10743052 19728690 ~ 19728755 (-)
XLOC_014551 NA non-coding downstream 320117 8649124 ~ 8663238 (-)
XLOC_014550 NA non-coding downstream 330233 8647533 ~ 8653122 (-)
XLOC_014547 NA non-coding downstream 859913 8121929 ~ 8123442 (-)
XLOC_014545 NA non-coding downstream 978305 7987661 ~ 8005050 (-)

Expression


Co-expression Network