XLOC_014578


Basic Information

Item Value
gene id XLOC_014578
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 9904324 ~ 9906939 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029757
GATTACAGCATCACGGGAAACGCTTGCCTGCGGTGAGATTATCCCACTGGGACGCAAAGAGGTGCAGGGCAGGAGCTCGCTAATCACTGTGGAAATGAAGATACTCGAGGCACCATTTGGCGACAGAATACACTGGAGAACTTCTAGACAGGCTTTTGAAGTGTGAAAAGATGGATGTTGGAAAGGGTTTGCATATGTAGGAGATGAAGGAAAACCAATGAATGTGAAGAGCCTGGAGGATATTCTTATTGGAGAACAGTGGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029757 True 264 lncRNA 0.47 2 9904324 9906939

Neighbor

gene id symbol gene type direction distance location
XLOC_014577 cacng7a coding downstream 21503 9840771 ~ 9882821 (-)
XLOC_014576 cacng8a coding downstream 74359 9813287 ~ 9829965 (-)
XLOC_014574 si:dkey-14o18.2 coding downstream 117410 9732084 ~ 9786914 (-)
XLOC_014575 znfl1h coding downstream 128249 9771417 ~ 9776075 (-)
XLOC_014573 slc2a3a coding downstream 191794 9685165 ~ 9712530 (-)
XLOC_014579 grin2da coding upstream 3023 9909962 ~ 10081047 (-)
XLOC_014580 BX950852.1 coding upstream 105559 10012498 ~ 10012614 (-)
XLOC_014581 BX950852.2 coding upstream 216294 10123233 ~ 10123347 (-)
XLOC_014582 dbpa coding upstream 270176 10177115 ~ 10196370 (-)
XLOC_014583 znf865 coding upstream 294231 10201170 ~ 10214265 (-)
XLOC_014711 CR382300.3 misc upstream 9821751 19728690 ~ 19728755 (-)
XLOC_014572 BX927218.2 non-coding downstream 220816 9676517 ~ 9683508 (-)
XLOC_014570 NA non-coding downstream 294812 9594867 ~ 9609512 (-)
XLOC_014566 NA non-coding downstream 443995 9457546 ~ 9460329 (-)
XLOC_014565 NA non-coding downstream 505858 9391235 ~ 9398466 (-)
XLOC_014564 NA non-coding downstream 522303 9381458 ~ 9382021 (-)
XLOC_014600 BX005424.1 non-coding upstream 798520 10705459 ~ 10705475 (-)
XLOC_014603 NA non-coding upstream 952183 10859122 ~ 10881508 (-)
XLOC_014611 FP074861.1 non-coding upstream 1286310 11193249 ~ 11193363 (-)

Expression


Co-expression Network