XLOC_014592 (si:ch211-171h4.5)



Basic Information


Item Value
gene id XLOC_014592
gene name si:ch211-171h4.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 10454305 ~ 10478229 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00028845
AGATCTCTATAGAGCATGAGTGGACTAACAATCTTGGTATTCATGCTTTGGATATTGAAAGGTGCTCCCAGCAACATGTGGGAAATCAAGCTGCCTCAGAAAATAGATGCCATAAGTGGCTTCTGTGTTCATATTCCATGTCAGTTTGAGATCCCCGACTCATTCAAACCACTCCTAAGCCAATCAGCTGAAGCGCTGTGGAAAAAAACAGACATAGAAGGAGCAACTGTGTTCAGTTCAGCCAGAAAGACGACATCTCTTCTAAACGGAAACGTGATTGGCAACATCCTAAACAATAATTGCACCACTGTGTTTCACAACTTTCCTGCTGGATTCGGTGACACGTATTTCTTCAGGCTTCAGGGTCATGAAAATCTCAAGTACACATTTAAGCAAGGAGTGAGAATCACAGTTCATGAAGATGTTCTACCGCCTGTCCTGAACCCACATGCCCAGGTACTGGAGGTTTTAGAGGGTACCAAGCTGACCGTGAGCTGCTCCACTGTGATCTCCTGTCCCTCAGTGCAGCCCTTGATGCAGTGGAACACACAGCTAGAAGAGCTGCTGCCACCAGCTCTCCAGAAGGATGAGGTTGGACAGACATTGCTGGTCTCCTCTCAGATGTTTAACGCAACGCCTCTGAATGACCAGTTTAAAATCTCCTGCTCCCTTCTGTACATGCAGGGCACCAAAACACCAGCTGAGAGCAGCATTACCCTGAGAGTCCTGTATGCTCCCAGAAACACCATAGCTCTGGTGAGCCCATCGGGAGTGTTGTCTGAAGGCAGTGTGGTCACGCTGAGATGCCAAAGTGATGCCAACCCTGCAGTCCAGCGCTATGAGTGGTACAAATACAATGGAAATGGGAAGCTTGAGCTGCAGAATCAAGGACAGACTATCACAATGACAGCCGGGGTTGACGTTCAGGGACTTTATGTCTGCAAGGTCTACAATAATCGTGGGATTGACCAGTCCAAGGCTGTCTCTGTGAGCATAAATGGCTTCTGAAAATACAAGAGGACTCATGACATACGCCAGCCTGCACAAAACCAGCGACTCAGTATACAATGTCATACAGCCAAGAGCCAACAGATCTGAAGATGACTACGAAAACAGACACTTGAGCAAACAACAGTCCAGCTCCTAACTATGCAGCCATAAGAGTTAACAAGACACAAAGTGCTGTAGTGCCCACATTGTAGATGCAGGTTTCTGACTCCAATCATTTTCTCAGTATTTCGCAAAAATTAAATTGGCAAATGTGtaaattattcaatcaaaaagACAAAACTGGTAACATCATACAGTTTATAGgttcttgtgttttattttgagatgtatacactactgttcaaaCATTTGTCATTTTGTAAATAATTGAATACTTTTGTTCAGCTTAAAAATATAGTTATCAAAAGTGACAAACATGTTTATTGTATAAAGTTGAAGGATATTTATGTGTGAAATAAAGGTCGTTCTTTTAAAGAATGACAATGTTTttgagccccccc

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-151 No description available

Ensembl:

ensembl_id ENSDARG00000077337

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00028845 True 1511 mRNA 0.43 7 10454305 10478229

Neighbor


gene id symbol gene type direction distance location
XLOC_014591 il11b coding downstream 22171 10429810 ~ 10432134 (-)
XLOC_014590 si:ch211-171h4.3 coding downstream 29165 10415484 ~ 10425140 (-)
XLOC_014589 zgc:194578 coding downstream 58622 10375782 ~ 10395683 (-)
XLOC_014588 si:ch211-232m10.6 coding downstream 80675 10356345 ~ 10373630 (-)
XLOC_014587 ccdc106b coding downstream 123474 10325360 ~ 10330831 (-)
XLOC_014593 lim2.4 coding upstream 59214 10537443 ~ 10554352 (-)
XLOC_014594 si:dkey-211g8.6 coding upstream 133559 10611788 ~ 10612774 (-)
XLOC_014595 si:dkey-211g8.7 coding upstream 146415 10624644 ~ 10627752 (-)
XLOC_014596 si:dkey-211g8.9 coding upstream 152450 10630679 ~ 10631482 (-)
XLOC_014597 tekt2 coding upstream 158140 10636369 ~ 10648523 (-)
XLOC_014711 CR382300.3 misc upstream 9250461 19728690 ~ 19728755 (-)
XLOC_014581 BX950852.2 non-coding downstream 330958 10123233 ~ 10123347 (-)
XLOC_014580 BX950852.1 non-coding downstream 441691 10012498 ~ 10012614 (-)
XLOC_014578 NA non-coding downstream 547366 9904324 ~ 9906939 (-)
XLOC_014572 BX927218.2 non-coding downstream 770797 9676517 ~ 9683508 (-)
XLOC_014570 NA non-coding downstream 844793 9594867 ~ 9609512 (-)
XLOC_014600 BX005424.1 non-coding upstream 227230 10705459 ~ 10705475 (-)
XLOC_014603 NA non-coding upstream 380893 10859122 ~ 10881508 (-)
XLOC_014611 FP074861.1 non-coding upstream 715020 11193249 ~ 11193363 (-)
XLOC_014612 NA non-coding upstream 741532 11219761 ~ 11227568 (-)
XLOC_014620 CR548625.1 non-coding upstream 1247267 11725496 ~ 11725631 (-)

Expression



Co-expression Network