XLOC_014595 (si:dkey-211g8.7)


Basic Information

Item Value
gene id XLOC_014595
gene name si:dkey-211g8.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 10624644 ~ 10627752 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028851
TTTAAAATAAGATGGAAGGCTCAGACGTAGCCTGAAGAGTTTTGAATGCAAATCATACTAGTTTGCTGCACCCAAGCGGAGGCCGGACTGTCTTACAGAACTGCAAAGCCATTGATTTTATCAAGACTGATAACAAAGAAATAGTATTTGTTGGTGTCTTGGGAAGAACCTGCAGGACGGAATGTCAGAAGACTGTGTTTGTGAGGCGTTTCTCACAATATACATCATCACGTTCTTAATTGGTTTTCCTGGTACTGTGCTTGCATTGTGCTCATGCATTCGCAAAATTGCCAGCAAACCAATCCCCATTGACTTATTCATGTTGAATCTCGCCATTTCTGACCTCATCTTCCTCTCCTTCCTGCCCTTCAAAATGAAAGAGGCTGCAGATCAGATGATCTGGAACATGCCTCAAATCCTCTGCCAACTCAGTCTCTTCATGTTCTTTCTTCCTTTCTATTCTAGCGTCCTATTCCTGACAGCGATTAGCATTGAGCGCTATGTGTGTGTAGCATTTCCAACCAAGTATAAAAATCCAAAAAGAATAATTTATACAATAATCACATGTGTTGCCATTTGGGTGACTGTTGTGGGATATTCAATACTTCCGTACAAGGTGACATTTACAGATTCTCATGTAGCGGACAACACTACTAAGGTGTCATTTACAGATTCTCTTGTAGCGGACAACACTACTAATCAGCGCACTCTGGTGGCGGAACCTCAGAGATGTTACAGTAAATTTACAAAAGAGCAGCTCAAGGAATTGCTCCCAATTCGGCTGAGTATAGCAgtgttgtttttctttcttcCCCTGCTTATTTGCTGCTTCTTTTATGTCAGTTTCATTCGTATTCTGACAAATTTGCATCTAATCAAACGGCAACGTAAACTCAGAGCTATTGGACTGGTTGTGGGGACGCTTCTTGTTTTCACCACTTGTTTCGCACCCTACAATGTTTCCCATTTAGTGGGCTTTATCAAAAAAGAAAGTCCTGCTTGGCGAATGAAAACTTTAATGCTGAGCACTTTAAACGTATGTTATGACCAGATTATATTTTTCTGTATCTCTAGGGAAATGAGAAAGGCGATCAAGGTTTGTGCAAAGAGCGTTTTTCAGTTTTGTGTCTATTTGAAGCAGTGTGTTGTTACTGCTGTAAACTTGAAAAATGGCTTGACCAAAATGACTTCTAATTAAGTTTATTAATCGTTTATTCTAATGTTTTGTTTCTTCCTATatactaatttaattaaaattcaacCTACTGTACATTAGTGACCTGAGAACAGGATAAAACAATATAGGAAGGGGGACTATACACCAATTATGTTATGTAAAAAGCAAGTTCCAGGAAGGcaagttgtaaacaatttattaaagATATAAAACAACTCACTACATAATATTAAAATGCTGAAAGTTGTAGTCGTCTCTttgatttgtttgattaaatcaaAGAAATTTTTACCCCCTGCATAGTTTATATATTATCCATTCTCATTTGTTCTGAGTTGTTTTTATTCTTGTATATATTGTACAAAAGCTGAACTGTGTAGAAACTGACTGTAATATactgtttttagaaatatttatttcAGCTAATATCAGCTAAATTCACCTTATGTTTAAGAAATCAATACATTTGATTGTAGTTTTACTGTGTCATTatgtaaataagttattttttacaGGGTTATATCATGattcaaattaataatttttgtgtGGTTGTTATTGTCAGGAGCGATGCTGGTGACAAAATCTATGCCAGGTCAAttgtaaaaaacatatataataaattatgacACTTTTATGACA

Function

symbol description
si:dkey-211g8.7 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human FFAR2 (free fatty acid receptor 2).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-907 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human FFAR2 (free fatty acid receptor 2).

Ensembl:

ensembl_id ENSDARG00000058535

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028851 True 1819 mRNA 0.36 3 10624644 10627752

Neighbor

gene id symbol gene type direction distance location
XLOC_014594 si:dkey-211g8.6 coding downstream 11870 10611788 ~ 10612774 (-)
XLOC_014593 lim2.4 coding downstream 70292 10537443 ~ 10554352 (-)
XLOC_014592 si:ch211-171h4.5 coding downstream 146415 10454305 ~ 10478229 (-)
XLOC_014591 il11b coding downstream 192510 10429810 ~ 10432134 (-)
XLOC_014590 si:ch211-171h4.3 coding downstream 199504 10415484 ~ 10425140 (-)
XLOC_014596 si:dkey-211g8.9 coding upstream 2927 10630679 ~ 10631482 (-)
XLOC_014597 tekt2 coding upstream 8617 10636369 ~ 10648523 (-)
XLOC_014598 olah coding upstream 21672 10649424 ~ 10656796 (-)
XLOC_014599 slc9a3.1 coding upstream 64414 10692166 ~ 10730488 (-)
XLOC_014600 BX005424.1 coding upstream 77707 10705459 ~ 10705475 (-)
XLOC_014711 CR382300.3 misc upstream 9100938 19728690 ~ 19728755 (-)
XLOC_014581 BX950852.2 non-coding downstream 501297 10123233 ~ 10123347 (-)
XLOC_014580 BX950852.1 non-coding downstream 612030 10012498 ~ 10012614 (-)
XLOC_014578 NA non-coding downstream 717705 9904324 ~ 9906939 (-)
XLOC_014572 BX927218.2 non-coding downstream 941136 9676517 ~ 9683508 (-)
XLOC_014570 NA non-coding downstream 1015132 9594867 ~ 9609512 (-)
XLOC_014603 NA non-coding upstream 231370 10859122 ~ 10881508 (-)
XLOC_014611 FP074861.1 non-coding upstream 565497 11193249 ~ 11193363 (-)
XLOC_014612 NA non-coding upstream 592009 11219761 ~ 11227568 (-)
XLOC_014620 CR548625.1 non-coding upstream 1097744 11725496 ~ 11725631 (-)

Expression


Co-expression Network