XLOC_014602 (si:dkey-3n22.9)


Basic Information

Item Value
gene id XLOC_014602
gene name si:dkey-3n22.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 10805858 ~ 10810006 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028864
AATGTCCTGACTGTGGGATGATGTACAGATATCAAGAATGGAGTAATGGAATTCACAATTTCAATGACCATATACTCCTTACCCTTCATTTGTGTATTGTACTACGTGGATCACTTCAGACTCACCATTCTGTAAGCCGAGCAATTGAAGTCATTGAGCAAACAGAAAACAAGACCCTCCCTAGAAAAGCCACAATACTTCATGCCTATATGCACTTTGAAGCCATGACTTCACACGACTACTTATATACTTGTTACAAATGTGGATACTATCCACCAGTGGTGGTCATGGACCTTCACAGAAAAGGTGTATTCAATATGCCTGTAAGTGAAATGGAGGCTCCACCAGCACACTTTGATGGCACtgttaatattaaacaattttgGGACTCTGTGACGGCTGAAATTGTTTGCAGCGGATTTCTTACCTgTGGTCGACAGAACCCGTTTGTGGTTGTTCCAAGTTATAACAACTGGGCTCCTTGGATTGGACCAAAAACCAGAAGGGATGAGACAGTTTTAAACACAGAACATGAAAAGCTTCATGCACCAAGACAGGCTACTGAAATGGCAGATCTCCAGATGACAGAGGAGAGACTTCAAGATGCACTAATTAATCTCAAGGTGGACATGGTTCGAAAACTGTGCAAGCAATGTGGCTTGGACTCAAAAGGCTCAAAAACAGACCTCATCCTAAAACTGCGGGATGAAATGAAGAACAGGTCATCTTATGATAAGATCTTTGAGAAGGTCTGGGGAGCTTCAGGTGGTTGGGCAGCTGTTATGTGCCCCTGTGCAGTGGTGTACTCCATAAAATTTAACTTAAGAGCAGAGAGTCCCAGAGACTATGCTGACATGTTACTTAGCTGGAAGCACTTTCCAAACATAGCCATATACGACTTTGCAAGAGGACTGGCAACACATACTAACTTGAGGGAGCCTGAAAAAATGCCATTTAGCCCACACGAGGGCCGACTGGCTGAAGCAACCACAGACAATCTACAGCTGGCTGGTGAGGGAAAGCTAAAGGTCAGTTTACCTTGGctcaaaacaaagaaaacagatTCAGACACAAACTGCCACCCGATCACTGGGTCATCTGACCACTACACCCTATATGACATTTTCCATGAGAGGAATACAAAGGATGCTCGAGATGCCCTTCGGAGGATTGGACTTGTCCCAGAACTGGCTGGCTGGGTTAACAGCCAGTGTGCTGAGCAGTTATTTGCAGACATGAGGAAGAACAATTATTTTTTGAATACCCTCACACCCTCTCAGCACATCTTTATGATGCGGAACATACTACAACACTACAACACAAATTGCAACATTAAAACTAAAGCCAGCATCCAGAAAGTAGTAGGCAAAGATGTTCAGTTGCAGTTGGATCACAACGGTCAGATAGTAATGGGAAAAGCTGCACAGATACCAACTGAAGCAGGTGAACCAATACAATACATTCAAAGTGCAATGACAAGCCAGACAGATGAACAAGCAAGCAGGAGGATATGGGATGTTGACTATCTCCCAGCAGAACAGAATTCGcTGGCTTATGTCTTGGATAGAGCCAAAGATCCAAGTGAGGATTTACTTCAGCTGAGCCCAGTCCAAACATTAAAGAGAAGTGACTTTTGGTCTTTGGCCTTTGATGAGTTAGAGGCAACGattgCTAATCAGTGCTTTCAGCTCATAGCTACACTTGCAGCTTCACAGGGCAAAGATGTGTTTGCTGTCAACAGTTATGTGGTGGTCACGTGGTTGCCTCCATATAACAATGATCCTCTGCCAGCTTTACCTGATGATGCTGCAACCAAGGACTTTATTTTACTTCCCTCATTGGAGTCAGGGCATTGGATTATATATCCTCAAGCCAAAGTCAagagagattttattttttgactccATGAATCCTAGAGACTTTGGACATCGGAGCTACATTCAGATTTTCAGGTTTTCCCCTGAGGATAGCACATTTCAAGTTTTACCTTTCTGTGTTCATACTAATAACATGCATGGGTTTGAAGATAATACTAACACAAATTAATGTCTTAAGTAAACCAGCTTGTTTTATTATGCAGTAGTCTTTATCTCATTTTGAATAAACtggctataattttttttta

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-120215-95 No description available

Ensembl:

ensembl_id ENSDARG00000096273

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028864 True 2125 mRNA 0.42 13 10805858 10810006

Neighbor

gene id symbol gene type direction distance location
XLOC_014601 slc9a3.2 coding downstream 34300 10738150 ~ 10771558 (-)
XLOC_014599 slc9a3.1 coding downstream 75370 10692166 ~ 10730488 (-)
XLOC_014600 BX005424.1 coding downstream 100383 10705459 ~ 10705475 (-)
XLOC_014598 olah coding downstream 149062 10649424 ~ 10656796 (-)
XLOC_014597 tekt2 coding downstream 157335 10636369 ~ 10648523 (-)
XLOC_014603 NA coding upstream 49116 10859122 ~ 10881508 (-)
XLOC_014604 pip5k1aa coding upstream 82459 10892465 ~ 10915898 (-)
XLOC_014605 ecm1a coding upstream 107596 10917602 ~ 10920577 (-)
XLOC_014606 LO018584.1 coding upstream 145331 10955337 ~ 10971230 (-)
XLOC_014607 tpm3 coding upstream 175363 10985369 ~ 11031394 (-)
XLOC_014711 CR382300.3 misc upstream 8918684 19728690 ~ 19728755 (-)
XLOC_014581 BX950852.2 non-coding downstream 682511 10123233 ~ 10123347 (-)
XLOC_014580 BX950852.1 non-coding downstream 793244 10012498 ~ 10012614 (-)
XLOC_014578 NA non-coding downstream 898919 9904324 ~ 9906939 (-)
XLOC_014572 BX927218.2 non-coding downstream 1122350 9676517 ~ 9683508 (-)
XLOC_014611 FP074861.1 non-coding upstream 383243 11193249 ~ 11193363 (-)
XLOC_014612 NA non-coding upstream 409755 11219761 ~ 11227568 (-)
XLOC_014620 CR548625.1 non-coding upstream 915490 11725496 ~ 11725631 (-)
XLOC_014623 FP236813.1 non-coding upstream 1236448 12046454 ~ 12046570 (-)

Expression


Co-expression Network