XLOC_014612



Basic Information


Item Value
gene id XLOC_014612
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 11219761 ~ 11227568 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030168
TCAAAATCAAGGGATCGAAGATGTGGCTGTAACCTGCGTGTAGCGAAACCATGGAGCCAACAGGGCAGAGGTTGTCCGGGTGTTTGCAGTCGAGGCAGCTGCGTTCTTTCAAACCACAGCAAAGTATTCGCACGCAGACATGGAGACAGAGCCTCCAGGGGCCTCGGGGGACCCAAAACCAGTGCAGGATCTATTCGCTTTACCGCCG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030168 True 208 lncRNA 0.55 2 11219761 11227568

Neighbor


gene id symbol gene type direction distance location
XLOC_014610 si:dkey-240h12.4 coding downstream 10937 11167289 ~ 11208824 (-)
XLOC_014611 FP074861.1 coding downstream 26398 11193249 ~ 11193363 (-)
XLOC_014609 si:dkey-240h12.3 coding downstream 62102 11129318 ~ 11157659 (-)
XLOC_014608 arhgef1a coding downstream 113446 11039517 ~ 11106315 (-)
XLOC_014607 tpm3 coding downstream 188367 10985369 ~ 11031394 (-)
XLOC_014613 ssr2 coding upstream 3515 11231083 ~ 11238721 (-)
XLOC_014614 irgf3 coding upstream 19486 11247054 ~ 11248982 (-)
XLOC_014615 eepd1 coding upstream 43279 11270847 ~ 11315224 (-)
XLOC_014616 sept7a coding upstream 104254 11331822 ~ 11425592 (-)
XLOC_014617 hsbp1l1 coding upstream 201695 11429263 ~ 11431278 (-)
XLOC_014711 CR382300.3 misc upstream 8501122 19728690 ~ 19728755 (-)
XLOC_014603 NA non-coding downstream 338253 10859122 ~ 10881508 (-)
XLOC_014600 BX005424.1 non-coding downstream 514286 10705459 ~ 10705475 (-)
XLOC_014581 BX950852.2 non-coding downstream 1096414 10123233 ~ 10123347 (-)
XLOC_014580 BX950852.1 non-coding downstream 1207147 10012498 ~ 10012614 (-)
XLOC_014620 CR548625.1 non-coding upstream 497928 11725496 ~ 11725631 (-)
XLOC_014623 FP236813.1 non-coding upstream 818886 12046454 ~ 12046570 (-)
XLOC_014625 CU468682.1 non-coding upstream 903477 12131045 ~ 12131180 (-)
XLOC_014626 CU468824.1 non-coding upstream 909168 12136736 ~ 12136871 (-)
XLOC_014632 NA non-coding upstream 1393358 12620926 ~ 12623962 (-)

Expression



Co-expression Network