XLOC_014683 (BX649471.3)


Basic Information

Item Value
gene id XLOC_014683
gene name BX649471.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 18314328 ~ 18315321 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029015
GAATATAACACTAGCTGCctgacactttattttaatttttttgtttaattcaggTTTCACAGATGTGCAAAATTGGTGGGAAAAATGTGAAGGACTGTGCGAGGAAAATGCTGGACAGGGTTTTGTAAAATTCCCTAATGTCTTGTTTCAACATGAAGGGGGTTGGTTTGCTGCAGAAGACAGCATTTCAGGCAACCACACTGTTCTCAGTGATTGCAGatgCAGAGATGACCATCTTCCCAAAAGCTAcagaatttgaaataaaaaatgcaatcgGGGAGCATTTTAAACAGGCACCAGGGAGAGttggggggggttggggggggtggatacaggaaaaaaataatttagtaaaataattggttcattttcctttttgaatttatttatttcctttttttttaccgCATTTAATGTTTTCTATTGTGACTGACATTTCAATGTTAGCTGTTCAATGTTTACTTATTGTTAATGTTGCTTCTattaataaaatctttatttaatcaGTTTAAATTTGCCATTTACGATATCCTGTTAATTAagtatttgtgttttgttgtctATTAAATGAAGGCTAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117531

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029015 True 578 lncRNA 0.34 3 18314328 18315321

Neighbor

gene id symbol gene type direction distance location
XLOC_014682 si:dkey-208k4.2 coding downstream 947 18310386 ~ 18313381 (-)
XLOC_014681 nfe2l3 coding downstream 161386 18143593 ~ 18152942 (-)
XLOC_014680 NA coding downstream 174434 18137714 ~ 18139894 (-)
XLOC_014679 cbx3a coding downstream 177918 18131512 ~ 18136410 (-)
XLOC_014678 snx10a coding downstream 183761 18118321 ~ 18130567 (-)
XLOC_014684 BX649471.2 coding upstream 47996 18363317 ~ 18364965 (-)
XLOC_014685 zgc:112966 coding upstream 101772 18417093 ~ 18418763 (-)
XLOC_014686 p3h4 coding upstream 108057 18423378 ~ 18492557 (-)
XLOC_014687 BX927404.1 coding upstream 169385 18484706 ~ 18485881 (-)
XLOC_014688 FP085400.1 coding upstream 281465 18596786 ~ 18597326 (-)
XLOC_014711 CR382300.3 misc upstream 1413369 19728690 ~ 19728755 (-)
XLOC_014677 CR391921.1 non-coding downstream 317992 17834204 ~ 17996336 (-)
XLOC_014673 NA non-coding downstream 959595 17353644 ~ 17354733 (-)
XLOC_014672 NA non-coding downstream 985275 17322000 ~ 17329053 (-)
XLOC_014671 NA non-coding downstream 992448 17321542 ~ 17321880 (-)
XLOC_014691 NA non-coding upstream 428656 18743977 ~ 18753193 (-)
XLOC_014692 NA non-coding upstream 434284 18749605 ~ 18750318 (-)

Expression


Co-expression Network