XLOC_014699 (FP067442.1)


Basic Information

Item Value
gene id XLOC_014699
gene name FP067442.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 18942726 ~ 18953206 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029044
ttctaggaagagtcctggtggttccaaacatcttccacttatgaatgatggaggccactgtgctcattggaactttcaaagcagcagaaatttttctgtaaccttccccagccttgtgcctcgagacattcttgtctacagacaattcctttgtcttcatgcttggtttgggcttttcaaatcatgtccaatcaactgaatttaccacaggtgaacttcaattaagctgctgaaacatctaaagattgatcagtggaaacagaatggacctgagctcaatttagagcttcacggcaaaggctgtgaatacttatgtacatgtgatttttcaggttttttatttttaacaaatttgcaacaatttcaaaaaatcttttttttttcacattgtcattatggggtattgtgtgtagaattttgaggaaataaatgaatttaatctattttggaataaggctgtaacatgaaaAAATGTGCAAAAGGTGAAGCACTATAAATACTGTACTTTCTGAAAGCACAGTATGTTGATTATGCATTTGCACACTTTTTTATCCCTTTATCATACCAACAAAATTGATGTCTGTTTAGAGCAACCACATGACCTAGAGCACCATATAAATGTTTCATGAAGTAAGAAAGTAATAGAGGAACAGAGAAATAGAGGAACATTACAACAACCAGACCACATCTATGAGACTATGACTTTCACTGTTTTACTCTGTCTTTCATTGTATGGATTTATGCTGACATCATTTgCTGTCCAGCACCAGCGGGTCCGACCCAATGGCATGGCCATTCTTCCATGTGGTGACTTGAAGGTTGGAAAAGTGACTTGGAGCAGGGATGTGAAAGGACATCAAGTGTCTATTCTCAGCACAGATGACGGAAAGATAATCAGACACATGCATAATAACAATTACAGTTCATTACCAGACCTGTCTCTGATTATCTGGTTTGTCTCATCTTGGGATGAAGGGTTGTATTATTGCAATGGGACATCTGTGGCATGTCTGACAGTGAAACCAGCTGATGGACGGAACATTGAGGATCTGACTAAATGTCTCAAAGGTGCTGACCATGCTGATGTGATGGAGCAAGTGTTGATGTTTGGCGGTGTTGGATTGGCAGCTCTGATGTTTCTCTTTGCTACGGCAGCTGCAGTGAAAACTTTATACTGTATTGACAGTAAACCAAAACAAAGAACTCTTAACAAAGACCATGTTCAGATTAATCCAGATTATATTAACTTGAACAACAGTGAAACTGTTTTATagtattttgtaaaaacaaaagaaaagaaaacatttaaatgtgcaGCAGAGcttacagggatagttcaccctaaaatttaaAAGTACttactgtttactcaccctcaggtggttATGAACCTATGAATTTTcttaatctgttgaacacaaagatttTAAAGGACGTTGgaaccctgtaaccattgacctccatagtatgaCAAacatactaaggaagtcaatgtttaccagtttccaacatttccaACACTAGAAGAAAGCAACTCAAATATAGGATGATTAAATCctaatttggggtgaactataacTTTTCAAAGCTAGTCAGATACCACTACATCATTTACTAGTGACAAGCAATGACAGATTAAATGCCTGTTTGTTTATGTGCATGCTCTAagtcttttttgtgtttttttatgtatctGTGTGGCTACACCCTAGCTCCTAAGGTTTTTTATCAGTATGATGTGTGCACAACTTTGGGCActgtcctgtggtaatcctgtggtatttcagcagtataacataaatttaccacacaaaaaataagcaaagctaaatatgacaggattactacagcactttctgcagtacaatatcacaagaattaaCCACTAGATGAAGTAtgtgatttttgttgttgttgggggTGTGGTTTTAGCaactaaatatgacaggattactacagcactttctgctgTAAAATATGACAAGAAATTACCATTAGAAAAagaatgtttttttgttgttgttttgtgtgtgtgtgtgtgtgtggtaataccaacaaagctaaatatgacaagattactacagcactttctgctgtacaatatcacaagaatttACCATTAGATAAATTATGAggtttttctgttgttgtttttttttgtgtggtaataccaacacagctaaatatgacagggttactacagcactttctgctgTGAACTATCAAAAGAATTAGCTTTTTATTCTGGCATTttctaaaacatttgtttttcttagTGGTAGATAAAATCaaagtatgttctgc

Function

GO:

id name namespace
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0006338 chromatin remodeling biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0006996 organelle organization biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0051276 chromosome organization biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process
GO:0008380 RNA splicing biological_process
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:0044428 obsolete nuclear part cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0044451 obsolete nucleoplasm part cellular_component
GO:0032991 protein-containing complex cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005634 nucleus cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0043233 organelle lumen cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117338

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029044 True 2304 lncRNA 0.36 4 18942726 18953206

Neighbor

gene id symbol gene type direction distance location
XLOC_014698 FP074902.1 coding downstream 62602 18879002 ~ 18880124 (-)
XLOC_014697 NA coding downstream 79522 18860056 ~ 18863204 (-)
XLOC_014696 ppt2 coding downstream 87009 18846923 ~ 18855717 (-)
XLOC_014693 NA coding downstream 98313 18832068 ~ 18844413 (-)
XLOC_014700 dync1li1 coding upstream 36705 18989911 ~ 19026028 (-)
XLOC_014701 NA coding upstream 322607 19275813 ~ 19339337 (-)
XLOC_014702 smarcc1b coding upstream 388971 19342177 ~ 19379084 (-)
XLOC_014703 wipf3 coding upstream 484442 19437648 ~ 19446529 (-)
XLOC_014704 NA coding upstream 505845 19459051 ~ 19461297 (-)
XLOC_014711 CR382300.3 misc upstream 775484 19728690 ~ 19728755 (-)
XLOC_014695 FP074902.3 non-coding downstream 101183 18841413 ~ 18841543 (-)
XLOC_014694 FP074902.5 non-coding downstream 104185 18838411 ~ 18838541 (-)
XLOC_014706 NA non-coding upstream 557351 19510557 ~ 19512337 (-)
XLOC_014709 CR382300.5 non-coding upstream 756721 19709927 ~ 19710042 (-)
XLOC_014712 NA non-coding upstream 785573 19738779 ~ 19740396 (-)

Expression


Co-expression Network