XLOC_014706


Basic Information

Item Value
gene id XLOC_014706
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 19510557 ~ 19512337 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030204
GACGGAGGAGCAGgagcagcaggaggaggaggaggcacCGGTAAAACAAACACTCTGCTGTTCACCTGCATGAGCGAACGAGGAATGCTTGTCTTAGAAGGAATGGCCAAATAAGCAACTggattattgattattttagtgCATCTTTTGCTACTATTCCAGCCAAGCAATACGATTTAATAGTCCCATAGCCTGGGAATGCAGATCAACCCAAAATACCCTTTACATGGGACACTTATTTAAGCAGTAATTACAcagttgttttaaatattttgtgtagATTAAATTTATAAAGTTATAAAATGCATTAGTTAACTTATACAAACAGTGAgcagttattaataatataaaagtatttattaatcagttaACCCTTTTGACGTGTTTACCTCCTGgcccttactttagtgttcctgTTTAAAATTGACCGGTTCATTATAACCTGCTCTTAAATTAgcacaaaaacatttttcaaaaccacATTTCTATTCAAAATTCTTCAGCTGTGAAGTCAAAGTATGTCTCAAAAATGTCTCAAATTAGTGTTTAACATATATTTATAGAATTAGGCATAACATAACTGCGGTGAATATACAAATAGTGAGTGAGTTAAGGTATTGTAcagtatatttttttctgtttgataaGTCAATATAGTCTGGATACGCATTCATTTCCTTTTAGCGGACACTTTTGACcaggaacaccacaggtgtaacaaggttgacTAAAACACTTAATGAAAGAAGTGCTTATCACTTTAAATACAGAGTGTGGAAGATATCATAAGGCTCTTAggcaatcaaatgtaaaacacaatatttaagagTTGTATTTAAGAGATTTAGGCTGTAAAttggtcagatttgacccgaacatGACAGGAAGGTTAAAGGGAAAGTTTCCGCCCAAAACTGAAAAAATCTGCATCATTTGATTACTCTAGAGTTGTTCCAAATCCGTTTGTGTTtcattgttctgttgaacacaaaagtagatatttttgaGAGTTGAATACCTTTTTATTTTACTAGTATGCAACTATGGAAGTCAGGGTTTTgcaacttttttcaaaatatagtttttttgtgtgttttaaaaggTCTAACTTGTTTAGAGCAagtcaaggatgagtaaatgatggcacaATTTTAGGGTGTAGGGTTTGGGTGTCAGTTCAAAGAGCATTAATAACCTTAAGTCTGCACAATagaatatacacacacaaccacacacatacTACACGGCATATTTGCAATTACttgcattttttcttttcttttaaaaaatatattgtatttatatttcttgtattagtatatatttttttgctatacATTGCATTTACCTATATGTCCcatatattatatgtatacatAAATTCATGATGTATGTGACATTTTGTACCTTAAAAATCTTCAAACCTCTAGATCTGTATCTTTCACCTCATTGTCAATGGATGACCGTTATCtcaaatgtttaaaatacaccTACACATACAATATTATGACAATTTGATCATGACCAGActctaaaatgtgttatttatttatttatttacaaaagatcTTTTTTACAATGACTTTGAATTTGTCCGGTATGCCACAAACTTCCATGTAAGGTAGTGTGTTCACAAAGAGCAGGAGGAATGTCCCTTTGATCAGTCCATGACAGTGACCGTGCGCTGACCAGCACTTGTTAATCAACCGTTAAATCTCCCTGTTATAAATGTTCTCTGTCGTTGGTCTATGCAAATAACTGAGAATAAATGACCACATTTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030204 True 1781 lncRNA 0.33 1 19510557 19512337

Neighbor

gene id symbol gene type direction distance location
XLOC_014705 creb5a coding downstream 5390 19496479 ~ 19505167 (-)
XLOC_014704 NA coding downstream 49260 19459051 ~ 19461297 (-)
XLOC_014703 wipf3 coding downstream 64028 19437648 ~ 19446529 (-)
XLOC_014702 smarcc1b coding downstream 131473 19342177 ~ 19379084 (-)
XLOC_014701 NA coding downstream 171220 19275813 ~ 19339337 (-)
XLOC_014707 tax1bp1a coding upstream 36725 19549062 ~ 19599372 (-)
XLOC_014708 BX601646.1 coding upstream 84268 19596605 ~ 19664743 (-)
XLOC_014709 CR382300.5 coding upstream 197590 19709927 ~ 19710042 (-)
XLOC_014710 evx1 coding upstream 205634 19717971 ~ 19871211 (-)
XLOC_014712 NA coding upstream 226442 19738779 ~ 19740396 (-)
XLOC_014711 CR382300.3 misc upstream 216353 19728690 ~ 19728755 (-)
XLOC_014699 FP067442.1 non-coding downstream 557351 18942726 ~ 18953206 (-)
XLOC_014698 FP074902.1 non-coding downstream 630433 18879002 ~ 18880124 (-)
XLOC_014697 NA non-coding downstream 647353 18860056 ~ 18863204 (-)
XLOC_014713 NA non-coding upstream 267810 19780147 ~ 19786187 (-)
XLOC_014716 NA non-coding upstream 625342 20137679 ~ 20143137 (-)
XLOC_014718 NA non-coding upstream 641333 20153670 ~ 20154323 (-)

Expression


Co-expression Network