XLOC_014723 (dazl)


Basic Information

Item Value
gene id XLOC_014723
gene name dazl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 20389104 ~ 20403871 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029089
GGCCGCGTGTGGATTGAGCATTTAGAAAGTTAACGTTAGCGTTATTCGTTTAGCTTTTCGACGGACTTTGgggtttgtttttgtaaaaagctTAGGTAGCAAAACGCGTGGCCTTGTTTCTCATTCAAAATGGTTCAGGGGGTTCAGTTACCCGTGTGCCTGATATGTGGTTTGTATTCACAGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCAGCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGGGTAAACCCCCCCCCATATATGTACTGCAGCTGCTGTCCTCCAGGCCTGGCCCCACCATCACCTGTATTTAGTGGAGGAAATCAGTACATGCAgccttATTCTTACTCCAGTCCTCCAGGAATTATGGTTCCACAGGTGCCAATGAACTATGCACAGACCACGTATGCCTATCAGtaTCCCCTGCCACAGTGGTGTGGAGAGCAAAGGACGAGGCTTGTCAATCAGAATTTTGTGGATTGTGGAGTGCAGACTTTGCTAACCCTTATGTAGCCTTCACTACTAGCACAGACTTCTTGgtAGATGCCCAAAGAAGCACGGGAGAGCAACTTGGAGCAGTGGACTTCATTGGCTGTGTGTTTTCACACACCGTTGCAGATAGGGTCTGCATGAGTGTGATGTGAAGGTGTATTTTGAGGGAACAACATTATGACGGGATGAATATACTTTAACCTCACATCCACTGACTTTTGACAagctttgtttgctttttttttttttttttccctcatttatTTGTAATGTCTGTGTTTTCCTTTCTGCGTCATGGCCAACTAACTTTAAAGACACTTTTAAGCTCAcgaatgtgtatttatattttatttgtttcattattttaaagtttgaCTCATTGTTAGTAATGCACCATATGCATTTAGGTAACTGTTCGATTGCGTTCAGTGTGTTTTCAAGCAATGTTCAGTTTGCTTGTTCAAGCGAGTGTTCACCTTTTATAGTAGTTTGATTTTGGGGTTTTCACAAGGGCACATGTTCAAACTTTTTTGATTTGGTTGTTAAACACTAGGGTACAGTGGCTCCCCCtccttttttattgatttatgtttATACATCTGCTTGCTACATCGGTTATCActgtacttttttcttttttctttcttaagcTGGTTTTCTTGTCAGCGCAGTTATTAGGTGTAAATAAAATGATTGCATTAAttcaaaattgaaaataaaattttcTACTCTGCCCGTAAGTCACAGCAGGTCACAGGATGACTGACCTGTTTTAAATTAAAGCGATGATGGAATATTGATATCACTGTGAACACAGTCATGCTGCATTTTTCGGTTTTCCAGCACTTTTTCACACCAGTTCATTTTGTTGTTTgactgtttgtttttaaattgtggttttaaTAGTTTACTAAGAGTTATGGGGTGTTTTACTAAACACAAAGCACTGTTATCTTTGTACATAGTGTTGCAACACTTTTTGTTCTTATGGGGGACACATTCATCAGATTCTTTTAAAACCCAATTCTGACAGACTTGTATTGAAATTTCTCTTTTATTTCCTCATTTCCCATCGGCTCATGGGAGTTGTGGTTTCTATTGTGCCTTGCTATGAGAGCTGCTTCTAATCACTGTACTCTGGGTTTTGCCCGTGTATATATGTTTTGGATTTTGAtgttggcattgtacgatgttgctgtttttgttaataataaaaaataaagtttaattaattTGG
>TCONS_00029090
CCGCGGTCGATTATGTGCATCTGTCAGGAGAGCATAAATATTCGTCCAATTAAGATTTTTTACCCTAAATGCCCAGCTTGCCTAATGAAGAAACACGATAAGACCGTGTTCGGGATCTATCCGGTTTCGGCCGCGTGTGGATTGAGCATTTAGAAAGTTAACGTTAGCGTTATTCGTTTAGCTTTTCGACGGACTTTGgggtttgtttttgtaaaaagctTAGGTAGCAAAACGCGTGGCCTTGTTTCTCATTCAAAATGGTTCAGGGGGTTCAGTTACCCGTGTGCCTGATATGTGGTTTGTATTCACAGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCAGCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGGGTAAACCCCCCCCCATATATGTACTGCAGCTGCTGTCCTCCAGGCCTGGCCCCACCATCACCTGTATTTAGTGGAGGAAATCAGTACATGCAgccttATTCTTACTCCAGTCCTCCAGGAATTATGGTTCCACAGGTGCCAATGAACTATGCACAGACCACGTATGCCTATCAGtaTCCCCTGCCACAGTGGTGTGGAGAGCAAAGGACGAGGCTTGTCAATCAGAATTTTGTGGATTGTGGAGTGCAGACTTTGCTAACCCTTATGTAGCCTTCACTACTAGCACAGACTTCTTGATGCCCAAAGAAGCACGGGAGAGCAACTTGGAGCAGTGGACTTCATTGGCTGTGTGTTTTCACACACCGTTGCAGATAGGGTCTGCATGAGTGTGATGTGAAGGTGTATTTTGAGGGAACAACATTATGACGGGATGAATATACTTTAACCTCACATCCACTGACTTTTGACAagctttgtttgctttttttttttttttttccctcatttatTTGTAATGTCTGTGTTTTCCTTTCTGCGTCATGGCCAACTAACTTTAAAGACACTTTTAAGCTCAcgaatgtgtatttatattttatttgtttcattattttaaagtttgaCTCATTGTTAGTAATGCACCATATGCATTTAGGTAACTGTTCGATTGCGTTCAGTGTGTTTTCAAGCAATGTTCAGTTTGCTTGTTCAAGCGAGTGTTCACCTTTTATAGTAGTTTGATTTTGGGGTTTTCACAAGGGCACATGTTCAAACTTTTTTGATTTGGTTGTTAAACACTAGGGTACAGTGGCTCCCCCtccttttttattgatttatgtttATACATCTGCTTGCTACATCGGTTATCActgtacttttttcttttttctttcttaagcTGGTTTTCTTGTCAGCGCAGTTATTAGGTGTAAATAAAATGATTGCATTAAttcaaaattgaaaataaaattttcTACTCTGCCCGTAAGTCACAGCAGGTCACAGGATGACTGACCTGTTTTAAATTAAAGCGATGATGGAATATTGATATCACTGTGAACACAGTCATGCTGCATTTTTCGGTTTTCCAGCACTTTTTCACACCAGTTCATTTTGTTGTTTgactgtttgtttttaaattgtggttttaaTAGTTTACTAAGAGTTATGGGGTGTTTTACTAAACACAAAGCACTGTTATCTTTGTACATAGTGTTGCAACACTTTTTGTTCTTATGGGGGACACATTCATCAGATTCTTTTAAAACCCAATTCTGACAGACTTGTATTGAAATTTCTCTTTTATTTCCTCATTTCCCATCGGCTCATGGGAGTTGTGGTTTCTATTGTGCCTTGCTATGAGAGCTGCTTCTAATCACTGTACTCTGGGTTTTGCCCGTGTATATATGTTTTGGATTTTGAtgttggcattgtacgatgttgctgtttttgttaataataaaaaataaagtttaattaattTGG
>TCONS_00029091
GACCGAGAATGGGAGTGGCGCTTTATTGCAGATCTAGCAAGAGGCACTGACCCAGCGAGCCGCTCATTTCATTaacttattttgatattttaatcattttagatATGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCAGCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGGGTAAACCCCCCCCCATATATGTACTGCAGCTGCTGTCCTCCAGGCCTGGCCCCACCATCACCTGTATTTAGTGGAGGAAATCAGTACATGCAgccttATTCTTACTCCAGTCCTCCAGGAATTATGGTTCCACAGGTGCCAATGAACTATGCACAGACCACGTATGCCTATCAGAATTTTGTGGATTGTGGAGTGCAGACTTTGCTAACCCTTATGTAGCCTTCACTACTAGCACAGACTTCTTGATGCCCAAAGAAGCACGGGAGAGCAACTTGGAGCAGTGGACTTCATTGGCTGTGTGTTTTCACACACCGTTGCAGATAGGGTCTGCATGAGTGTGATGTGAAGGTGTATTTTGAGGGAACAACATTATGACGGGATGAATATACTTTAACCTCACATCCACTGACTTTTGACAagctttgtttgctttttttttttttttt
>TCONS_00029092
TGCAGATCTAGCAAGAGGCACTGACCCAGCGAGCCGCTCATTTCATTaacttattttgatattttaatcattttagatATGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGGGTAAACCCCCCCCCATATATGTACTGCAGCTGCTGTCCTCCAGGCCTGGCCCCACCATCACCTGTATTTAGTGGAGGAAATCAGTACATGCAgccttATTCTTACTCCAGTCCTCCAGGAATTATGGTTCCACAGGTGCCAATGAACTATGCACAGACCACGTATGCCTATCAGAATTTTGTGGATTGTGGAGTGCAGACTTTGCTAACCCTTATGTAGCCTTCACTACTAGCACAGACTTCTTGATGCCCAAAGAAGCACGGGAGAGCAACTTGGAGCAGTGGACTTCATTGGCTGTGTGTTTTCACACACCGTTGCAGATAGGGTCTGCATGAGTGTGATGTGAAGGTGTATTTTGAGGGAACAACATTATGACGGGATGAATATACTTTAACCTCACATCCACTGACTTTTGACAagctttgtttgcttttttttttt
>TCONS_00029093
GTGGCGCTTTATTGCAGATCTAGCAAGAGGCACTGACCCAGCGAGCCGCTCATTTCATTaacttattttgatattttaatcattttagatATGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCAGCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGGGTAAACCCCCCCCCATATATGTACTGCAGCTGCTGTCCTCCAGGCCTGGCCCCACCATCACCTGTATTTAGTGGAGGAAATCAGTACATGCAgccttATTCTTACTCCAGTCCTCCAGGAATTATGGTTCCACAGGTGCCAATGAACTATGCACAGACCACGTATGCCTATCAGtaTCCCCTGCCACAGTGGTGTGGAGAGCAAAGGACGAGGCTTGTCAATCAGAATTTTGTGGATTGTGGAGTGCAGACTTTGCTAACCCTTATGTAGCCTTCACTACTAGCACAGACTTCTTGATGCCCAAAGAAGCACGGGAGAGCAACTTGGAGCAGTGGACTTCATTGGCTGTGTGTTTTCACACACCGTTGCAGA
>TCONS_00029094
GTTTTTCCTTTTATGCATCTCAATAACCGTCTGGTTGTTTTGAGGCctagttttgttttatgttgtgcTCACGAAGCGTCcgttctttttttaaacaaatgtatattGAATGTGATGATGAAAGTTTTCTAAAATACACACAGGATATCCAGAAGCATCGTCAGGGTTTTCCGTCCTCCCTGAAGTTGTCTAACGGTTACATTTTACCTGAGGGGAAAATGACGCCCAACACACTGTTCGTCGGCGGTATTGATATGAAGGTGGATGAGAACGAGATCAGGGAATTCTTTGCCAAGTATGGCTCAGTGAAAGAAGTTAAAATCATCACTTATCGAGGAGGAATTTGCAaaggATATGGTTTCGTTTATTTCAGTGAGGATGTTGATATCCAGACTATCGTTGATCAGCCGATCAGTTTTAAAGGGAAAAAACTCAAACTGGGACCTGCAATCATGAAAGAGCGAAGTTCTCGGTCAGTGTCATCTCCAATGATTGGTCCATCACAGTGG

Function

symbol description
dazl Enables mRNA 3'-UTR binding activity; sequence-specific DNA binding activity; and translation activator activity. Acts upstream of or within 3'-UTR-mediated mRNA stabilization and negative regulation of gene silencing by miRNA. Located in cytoplasm. Is expressed in blastodisc; gonad; unfertilized egg; and yolk. Orthologous to several human genes including DAZL (deleted in azoospermia like).

GO:

id name namespace
GO:0048477 oogenesis biological_process
GO:0010628 positive regulation of gene expression biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0007281 germ cell development biological_process
GO:0006417 regulation of translation biological_process
GO:0007283 spermatogenesis biological_process
GO:0060965 negative regulation of gene silencing by miRNA biological_process
GO:0070935 3'-UTR-mediated mRNA stabilization biological_process
GO:0045948 positive regulation of translational initiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0008494 translation activator activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003729 mRNA binding molecular_function
GO:0003730 mRNA 3'-UTR binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000405-6 Enables mRNA 3'-UTR binding activity; sequence-specific DNA binding activity; and translation activator activity. Acts upstream of or within 3'-UTR-mediated mRNA stabilization and negative regulation of gene silencing by miRNA. Located in cytoplasm. Is expressed in blastodisc; gonad; unfertilized egg; and yolk. Orthologous to several human genes including DAZL (deleted in azoospermia like).

Ensembl:

ensembl_id ENSDARG00000036214

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029089 False 2035 mRNA 0.40 10 20389104 20403507
TCONS_00029090 False 2159 mRNA 0.40 10 20389104 20403635
TCONS_00029091 False 919 mRNA 0.44 9 20390089 20403871
TCONS_00029092 False 885 mRNA 0.44 9 20390094 20403845
TCONS_00029093 False 831 mRNA 0.46 10 20390214 20403857
TCONS_00029094 True 509 mRNA 0.41 5 20399634 20403318

Neighbor

gene id symbol gene type direction distance location
XLOC_014722 rftn1a coding downstream 759 20301373 ~ 20388345 (-)
XLOC_014721 gpnmb coding downstream 118897 20247435 ~ 20270207 (-)
XLOC_014720 NA coding downstream 189894 20191884 ~ 20199210 (-)
XLOC_014719 fam221a coding downstream 225871 20158657 ~ 20163233 (-)
XLOC_014718 NA coding downstream 234781 20153670 ~ 20154323 (-)
XLOC_014724 tbc1d5 coding upstream 282 20404153 ~ 20446756 (-)
XLOC_014725 BX927400.1 coding upstream 35271 20439142 ~ 20439260 (-)
XLOC_014726 satb1a coding upstream 49960 20453831 ~ 20482261 (-)
XLOC_014727 ngly1 coding upstream 357237 20761108 ~ 20777351 (-)
XLOC_014728 BX511212.1 coding upstream 712540 21116411 ~ 21116543 (-)
XLOC_014711 CR382300.3 misc downstream 660349 19728690 ~ 19728755 (-)
XLOC_014716 NA non-coding downstream 245967 20137679 ~ 20143137 (-)
XLOC_014713 NA non-coding downstream 602917 19780147 ~ 19786187 (-)
XLOC_014712 NA non-coding downstream 648708 19738779 ~ 19740396 (-)
XLOC_014729 BX470117.1 non-coding upstream 772386 21176257 ~ 21188038 (-)
XLOC_014730 NA non-coding upstream 954707 21358578 ~ 21367332 (-)
XLOC_014733 NA non-coding upstream 1630326 22034197 ~ 22039502 (-)

Expression


Co-expression Network