XLOC_014743 (BX571825.10)


Basic Information

Item Value
gene id XLOC_014743
gene name BX571825.10
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 23042486 ~ 23042956 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029144
ATGATTATCTTCATCTGGGCATTTTACTGCATCCAAGGCTGTTTGGGGCAGATTACTATTACTCAACCTAATGTTAAATTAGTTCAGCTCAGTCAAACAGTCTCTATTGACTGTAAGGTCAACACTGTAGTTTACAGGTATCCAACTGGTTCAATCTCTAAAGATTATTACATCTCCTGGTATCTTCAGAAGCCAGAGGAGCCTTCTAAACTCCTTATGTATTTCACAACAATGAAACTTCCAAGTACTTCATCTAGAATGAGTGGAGGAGGTAGTTTTCACTCTGGAGGAAACGGTCTTGACTTCACTTTGACCATCAGTGAAGCTCAGCTTGAAGATGCTGGAGTTTATTACTGTCAGAGTTACCATGAGATAAGTGGTAAACCATTGTTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093479

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029144 True 394 IG_V_pseudogene 0.39 2 23042486 23042956

Neighbor

gene id symbol gene type direction distance location
XLOC_014742 NA coding downstream 72925 22965786 ~ 22969561 (-)
XLOC_014741 nudcd1 coding downstream 199006 22759116 ~ 22843480 (-)
XLOC_014739 eif3eb coding downstream 378088 22622355 ~ 22664398 (-)
XLOC_014740 BX957242.1 coding downstream 396187 22646182 ~ 22646299 (-)
XLOC_014738 pleca coding downstream 420495 22407819 ~ 22621991 (-)
XLOC_014744 BX571825.3 coding upstream 3844 23046800 ~ 23047282 (-)
XLOC_014745 BX571825.8 coding upstream 4961 23047917 ~ 23048219 (-)
XLOC_014746 BX571825.11 coding upstream 7821 23050777 ~ 23051016 (-)
XLOC_014747 NA coding upstream 9022 23051978 ~ 23052463 (-)
XLOC_014748 BX571825.6 coding upstream 21069 23064025 ~ 23064838 (-)
XLOC_014711 CR382300.3 misc downstream 3313731 19728690 ~ 19728755 (-)
XLOC_014734 NA non-coding downstream 980432 22059711 ~ 22062054 (-)
XLOC_014733 NA non-coding downstream 1002984 22034197 ~ 22039502 (-)
XLOC_014730 NA non-coding downstream 1675154 21358578 ~ 21367332 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) LOC120549767 NA misc NC_053131.1 CM020928.1 13968027 ~ 13968810 (+)
tiger barb (Puntius tetrazona) trnaa-ugc_49 NA coding NC_056704.1 CM032073.1 13439393 ~ 13439464 (-)
mexican tetra (Astyanax mexicanus) G146076 NA non-coding NC_035912.1 CM008315.1 32371444 ~ 32371806 (+)